RNA–Protein interactions for RNA: ENST00000392004.7

COL6A3-205, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best) BASIC

Gene COL6A3, Length 4,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-205ENST00000392004 FAM90A9PA6NNJ1 464 aa8.02□□□□□ -1.12
COL6A3-205ENST00000392004 K7EP13 123 aa8.02□□□□□ -1.12
COL6A3-205ENST00000392004 TOMM40O96008 361 aa8.02□□□□□ -1.12
COL6A3-205ENST00000392004 LINC01006Q8NI28 216 aa8.02□□□□□ -1.12
COL6A3-205ENST00000392004 Q9H3A6 140 aa8.02□□□□□ -1.12
COL6A3-205ENST00000392004 F6UB75 175 aa8.02□□□□□ -1.13
COL6A3-205ENST00000392004 C5orf17Q8NAS9 161 aa8.02□□□□□ -1.13
COL6A3-205ENST00000392004 CFHR4Q92496 578 aa8.02□□□□□ -1.13
COL6A3-205ENST00000392004 IGLV2-23P01705 113 aa8.02□□□□□ -1.13
COL6A3-205ENST00000392004 ELANEP08246 267 aa8.02□□□□□ -1.13
COL6A3-205ENST00000392004 PVRIGQ6DKI7 326 aa8.02□□□□□ -1.13
COL6A3-205ENST00000392004 OR4C46A6NHA9 309 aa8.01□□□□□ -1.13
COL6A3-205ENST00000392004 P01737 135 aa8.01□□□□□ -1.13
COL6A3-205ENST00000392004 CSN3P07498 182 aa8.01□□□□□ -1.13
COL6A3-205ENST00000392004 ASPHD1Q5U4P2 390 aa8.01□□□□□ -1.13
COL6A3-205ENST00000392004 SPANXN1Q5VSR9 72 aa8.01□□□□□ -1.13
COL6A3-205ENST00000392004 MBD6Q96DN6 1003 aa8.01□□□□□ -1.13
COL6A3-205ENST00000392004 FAM223BA6NKX1 122 aa8.01□□□□□ -1.13
COL6A3-205ENST00000392004 ATP5IP56385 69 aaPredicted RBP8.01□□□□□ -1.13
COL6A3-205ENST00000392004 ERASQ7Z444 233 aa8.01□□□□□ -1.13
COL6A3-205ENST00000392004 FAM223AQ8IWN6 122 aa8.01□□□□□ -1.13
COL6A3-205ENST00000392004 LINC00479Q96M42 142 aa8.01□□□□□ -1.13
COL6A3-205ENST00000392004 COL27A1Q8IZC6 1860 aaPredicted RBP8.01□□□□□ -1.13
COL6A3-205ENST00000392004 KNCNA6PVL3 124 aa8.01□□□□□ -1.13
COL6A3-205ENST00000392004 M0R381 172 aa8.01□□□□□ -1.13
COL6A3-205ENST00000392004 CRLF1O75462 422 aa8.01□□□□□ -1.13
COL6A3-205ENST00000392004 HLA-DMBP28068 263 aa8.01□□□□□ -1.13
COL6A3-205ENST00000392004 APRG1Q8IVJ8 170 aa8.01□□□□□ -1.13
COL6A3-205ENST00000392004 C18orf32Q8TCD1 76 aa8.01□□□□□ -1.13
COL6A3-205ENST00000392004 TMEM70Q9BUB7 260 aa8.01□□□□□ -1.13
COL6A3-205ENST00000392004 C19orf24Q9BVV8 132 aa8.01□□□□□ -1.13
COL6A3-205ENST00000392004 OR11H12B2RN74 326 aa8□□□□□ -1.13
COL6A3-205ENST00000392004 IGHG2P01859 326 aa8□□□□□ -1.13
COL6A3-205ENST00000392004 CA1P00915 261 aaPredicted RBP8□□□□□ -1.13
COL6A3-205ENST00000392004 NUDT3O95989 172 aa8□□□□□ -1.13
COL6A3-205ENST00000392004 EIF4EBP1Q13541 118 aaPredicted RBP8□□□□□ -1.13
COL6A3-205ENST00000392004 UNQ9165/PRO28630Q6UXU0 137 aa8□□□□□ -1.13
COL6A3-205ENST00000392004 SMIM12Q96EX1 92 aa8□□□□□ -1.13
COL6A3-205ENST00000392004 TMEM191AQ9H0A3 160 aa8□□□□□ -1.13
COL6A3-205ENST00000392004 NPIPB5A8MRT5 1133 aa8□□□□□ -1.13
COL6A3-205ENST00000392004 IGLL1P15814 213 aa8□□□□□ -1.13
COL6A3-205ENST00000392004 SLC25A34Q6PIV7 304 aa8□□□□□ -1.13
COL6A3-205ENST00000392004 GTF2H5Q6ZYL4 71 aa8□□□□□ -1.13
COL6A3-205ENST00000392004 NUDT11Q96G61 164 aa8□□□□□ -1.13
COL6A3-205ENST00000392004 SMIM27A0A1W2PRY6 76 aa7.99□□□□□ -1.13
COL6A3-205ENST00000392004 FAM159AQ6UWV7 190 aa7.99□□□□□ -1.13
COL6A3-205ENST00000392004 C17orf77Q96MU5 243 aa7.99□□□□□ -1.13
COL6A3-205ENST00000392004 LSM4Q9Y4Z0 139 aaKnown RBP7.99□□□□□ -1.13
COL6A3-205ENST00000392004 TRAV12-2A0A075B6T6 113 aa7.99□□□□□ -1.13
COL6A3-205ENST00000392004 K7EIM0 57 aa7.99□□□□□ -1.13
COL6A3-205ENST00000392004 IGLC1P0CG04 106 aa7.99□□□□□ -1.13
COL6A3-205ENST00000392004 ERCC8Q13216 396 aa7.99□□□□□ -1.13
COL6A3-205ENST00000392004 RASL11AQ6T310 242 aa7.99□□□□□ -1.13
COL6A3-205ENST00000392004 C8orf31Q8N9H6 132 aa7.99□□□□□ -1.13
COL6A3-205ENST00000392004 NF1P21359 2839 aa7.99□□□□□ -1.13
COL6A3-205ENST00000392004 TRAV12-3A0A0B4J271 114 aa7.99□□□□□ -1.13
COL6A3-205ENST00000392004 SLAQ13239 276 aa7.99□□□□□ -1.13
COL6A3-205ENST00000392004 MPV17L2Q567V2 206 aa7.99□□□□□ -1.13
COL6A3-205ENST00000392004 NUDT10Q8NFP7 164 aa7.99□□□□□ -1.13
COL6A3-205ENST00000392004 MEGF9Q9H1U4 602 aa7.99□□□□□ -1.13
COL6A3-205ENST00000392004 A0A1W2PRE2 83 aa7.98□□□□□ -1.13
COL6A3-205ENST00000392004 TEX22C9J3V5 150 aa7.98□□□□□ -1.13
COL6A3-205ENST00000392004 SPINK13Q1W4C9 94 aa7.98□□□□□ -1.13
COL6A3-205ENST00000392004 NPBQ8NG41 125 aa7.98□□□□□ -1.13
COL6A3-205ENST00000392004 DLX4Q92988 240 aaPredicted RBP7.98□□□□□ -1.13
COL6A3-205ENST00000392004 ST20Q9HBF5 79 aa7.98□□□□□ -1.13
COL6A3-205ENST00000392004 ESM1Q9NQ30 184 aa7.98□□□□□ -1.13
COL6A3-205ENST00000392004 IGHV3-53P01767 116 aa7.98□□□□□ -1.13
COL6A3-205ENST00000392004 HILS1P60008 231 aa7.98□□□□□ -1.13
COL6A3-205ENST00000392004 NSD1Q96L73 2696 aaPredicted RBP7.97□□□□□ -1.13
COL6A3-205ENST00000392004 TRGV2A0A075B6R0 118 aa7.97□□□□□ -1.13
COL6A3-205ENST00000392004 LGALS1P09382 135 aaKnown RBP7.97□□□□□ -1.13
COL6A3-205ENST00000392004 OXLD1Q5BKU9 147 aa7.97□□□□□ -1.13
COL6A3-205ENST00000392004 TTC9CQ8N5M4 171 aa7.97□□□□□ -1.13
COL6A3-205ENST00000392004 CLUHP3Q96NS8 147 aa7.97□□□□□ -1.13
COL6A3-205ENST00000392004 SSBP4Q9BWG4 385 aaPredicted RBP7.97□□□□□ -1.13
COL6A3-205ENST00000392004 CST9LQ9H4G1 147 aa7.97□□□□□ -1.13
COL6A3-205ENST00000392004 LEPROTL1O95214 131 aa7.97□□□□□ -1.13
COL6A3-205ENST00000392004 CD7P09564 240 aa7.97□□□□□ -1.13
COL6A3-205ENST00000392004 DEFB130BP0DP73 79 aa7.97□□□□□ -1.13
COL6A3-205ENST00000392004 DEFB130AP0DP74 79 aa7.97□□□□□ -1.13
COL6A3-205ENST00000392004 PSG9Q00887 426 aa7.97□□□□□ -1.13
COL6A3-205ENST00000392004 CFHR3Q02985 330 aa7.97□□□□□ -1.13
COL6A3-205ENST00000392004 PRR25Q96S07 402 aa7.97□□□□□ -1.13
COL6A3-205ENST00000392004 TRGV9Q99603 122 aa7.97□□□□□ -1.13
COL6A3-205ENST00000392004 PHLDA3Q9Y5J5 127 aa7.97□□□□□ -1.13
COL6A3-205ENST00000392004 IGKV1-17P01599 117 aa7.97□□□□□ -1.13
COL6A3-205ENST00000392004 CTSGP08311 255 aa7.97□□□□□ -1.13
COL6A3-205ENST00000392004 OCIAD2Q56VL3 154 aa7.97□□□□□ -1.13
COL6A3-205ENST00000392004 FANCD2OSQ96PS1 177 aa7.97□□□□□ -1.13
COL6A3-205ENST00000392004 IGHV3-73A0A0B4J1V6 119 aa7.96□□□□□ -1.13
COL6A3-205ENST00000392004 PRR20EP86478 221 aa7.96□□□□□ -1.13
COL6A3-205ENST00000392004 PRR20CP86479 221 aa7.96□□□□□ -1.13
COL6A3-205ENST00000392004 PRR20DP86480 221 aa7.96□□□□□ -1.13
COL6A3-205ENST00000392004 PRR20BP86481 221 aa7.96□□□□□ -1.13
COL6A3-205ENST00000392004 PRR20AP86496 221 aa7.96□□□□□ -1.13
COL6A3-205ENST00000392004 POU2AF1Q16633 256 aa7.96□□□□□ -1.13
COL6A3-205ENST00000392004 MRPL32Q9BYC8 188 aaKnown RBP7.96□□□□□ -1.13
COL6A3-205ENST00000392004 TMEM189A5PLL7 270 aa7.96□□□□□ -1.14
COL6A3-205ENST00000392004 GGTLC3B5MD39 225 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms