RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 CFAP126Q5VTH2 177 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 RASL11AQ6T310 242 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 TEN1Q86WV5 123 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 RPS19BP1Q86WX3 136 aaKnown RBP1.69□□□□□ -2.14
PTPRC-205ENST00000391970 ORMDL3Q8N138 153 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 GAPTQ8N292 157 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 LYPD1Q8N2G4 141 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 ZCCHC24Q8N2G6 241 aaKnown RBP1.69□□□□□ -2.14
PTPRC-205ENST00000391970 TMEM86AQ8N2M4 240 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 GNB1LQ9BYB4 327 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 ULBP3Q9BZM4 244 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 C16orf95Q9H693 158 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 CISHQ9NSE2 258 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 SPCS1Q9Y6A9 102 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 COL18A1P39060 1754 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 DOCK6Q96HP0 2047 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 SCN10AQ9Y5Y9 1956 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 KIAA1549LQ6ZVL6 1849 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 VWA8A3KMH1 1905 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 CCDC88CQ9P219 2028 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 MYBPHLA2RUH7 354 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 ZNF727A8MUV8 499 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 SSSCA1O60232 199 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 NUPR1O60356 82 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 DEDDO75618 318 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 DPM2O94777 84 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 NDUFB2O95178 105 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 CA2P00918 260 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 IGLV3-19P01714 112 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 IGHV3-7P01780 117 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 OR5AL1P0C617 328 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 CD28P10747 220 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 PPP1CCP36873 323 aaKnown RBP1.68□□□□□ -2.14
PTPRC-205ENST00000391970 QRFPP83859 136 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 EIF3IQ13347 325 aaKnown RBP1.68□□□□□ -2.14
PTPRC-205ENST00000391970 CDK5R1Q15078 307 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 ELOCQ15369 112 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 GUSBP1Q15486 140 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 MEIG1Q5JSS6 88 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 KPRPQ5T749 579 aaPredicted RBP1.68□□□□□ -2.14
PTPRC-205ENST00000391970 FAM27D1Q5T7N8 215 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 PRR9Q5T870 116 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 C1orf195Q5TG92 126 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 RPL7L1Q6DKI1 246 aaKnown RBP1.68□□□□□ -2.14
PTPRC-205ENST00000391970 ZNF550Q7Z398 422 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 PRR15Q8IV56 129 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 C3orf22Q8N5N4 141 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 C15orf53Q8NAA6 179 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 OR4X2Q8NGF9 303 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 OR2T10Q8NGZ9 312 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 MRPL30Q8TCC3 161 aaKnown RBP1.68□□□□□ -2.14
PTPRC-205ENST00000391970 KLF14Q8TD94 323 aaPredicted RBP1.68□□□□□ -2.14
PTPRC-205ENST00000391970 PPDPFLQ8WWR9 84 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 RAB37Q96AX2 223 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 S100A16Q96FQ6 103 aaKnown RBP1.68□□□□□ -2.14
PTPRC-205ENST00000391970 C20orf78Q9BR46 151 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 TXNDC17Q9BRA2 123 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 VSIRQ9H7M9 311 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 LINC00574Q9H8X3 128 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 MANBALQ9NQG1 85 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 LAMTOR3Q9UHA4 124 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 LY96Q9Y6Y9 160 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 COL27A1Q8IZC6 1860 aaPredicted RBP1.68□□□□□ -2.14
PTPRC-205ENST00000391970 DOCK4Q8N1I0 1966 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 NINQ8N4C6 2090 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 ZNF462Q96JM2 2506 aa1.68□□□□□ -2.14
PTPRC-205ENST00000391970 LOC102724200A0A096LPH7 203 aaPredicted RBP1.67□□□□□ -2.14
PTPRC-205ENST00000391970 IGHV1-24A0A0C4DH33 117 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 IGKV1-6A0A0C4DH72 117 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 C3orf85A0A1B0GTC6 90 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 IZUMO1RA6ND01 250 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 A8MWL6 223 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 C16orf90A8MZG2 172 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 M0R1B8 84 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 NDUFS5O43920 106 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 OR1I1O60431 355 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 CPSF4O95639 269 aaKnown RBP1.67□□□□□ -2.14
PTPRC-205ENST00000391970 IGKV1-39P01597 117 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 IGKV1D-39P04432 117 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 ZNF708P17019 499 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 PEBP1P30086 187 aaKnown RBP1.67□□□□□ -2.14
PTPRC-205ENST00000391970 EMP1P54849 157 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 CAV3P56539 151 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 KRTAP10-10P60014 251 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 RPS11P62280 158 aaKnown RBP eCLIP1.67□□□□□ -2.14
PTPRC-205ENST00000391970 HERVK_113P63121 156 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 GNG5P63218 68 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 SLC38A11Q08AI6 406 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 ADIGQ0VDE8 80 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 SP6Q3SY56 376 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 TTC32Q5I0X7 151 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 DEFB121Q5J5C9 76 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 IBA57Q5T440 356 aaKnown RBP1.67□□□□□ -2.14
PTPRC-205ENST00000391970 LINC01545Q5VT33 79 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 SPINT4Q6UDR6 99 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 C16orf47Q6ZP98 133 aaPredicted RBP1.67□□□□□ -2.14
PTPRC-205ENST00000391970 SSX8Q7RTT4 187 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 AAED1Q7RTV5 226 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 OR5D14Q8NGL3 314 aa1.67□□□□□ -2.14
PTPRC-205ENST00000391970 ZNF563Q8TA94 476 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms