RNA–Protein interactions for RNA: ENST00000390520.1

TRAJ17-201, Transcript of T cell receptor alpha joining 17, humanhuman

APPRIS P1 BASIC

Gene TRAJ17, Length 63 nt, Biotype TR J gene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ17-201ENST00000390520 MRPL35Q9NZE8 188 aaKnown RBP2.37□□□□□ -2.03
TRAJ17-201ENST00000390520 ZNF142P52746 1687 aaPredicted RBP2.37□□□□□ -2.03
TRAJ17-201ENST00000390520 ZMYM4Q5VZL5 1548 aa2.37□□□□□ -2.03
TRAJ17-201ENST00000390520 PIKFYVEQ9Y2I7 2098 aa2.37□□□□□ -2.03
TRAJ17-201ENST00000390520 UBR1Q8IWV7 1749 aa2.37□□□□□ -2.03
TRAJ17-201ENST00000390520 UNC13BO14795 1591 aa2.36□□□□□ -2.03
TRAJ17-201ENST00000390520 SIPA1L3O60292 1781 aaPredicted RBP2.36□□□□□ -2.03
TRAJ17-201ENST00000390520 COL16A1Q07092 1604 aaPredicted RBP2.36□□□□□ -2.03
TRAJ17-201ENST00000390520 IGLV3-12A0A075B6K2 115 aa2.36□□□□□ -2.03
TRAJ17-201ENST00000390520 IGKV1D-17A0A075B6S4 117 aa2.36□□□□□ -2.03
TRAJ17-201ENST00000390520 IGHV3-66A0A0C4DH42 116 aa2.36□□□□□ -2.03
TRAJ17-201ENST00000390520 F2Z2F3 143 aa2.36□□□□□ -2.03
TRAJ17-201ENST00000390520 BPY2O14599 106 aa2.36□□□□□ -2.03
TRAJ17-201ENST00000390520 NDUFC1O43677 76 aa2.36□□□□□ -2.03
TRAJ17-201ENST00000390520 SERF1AO75920 110 aa2.36□□□□□ -2.03
TRAJ17-201ENST00000390520 ASAH2BP0C7U1 165 aa2.36□□□□□ -2.03
TRAJ17-201ENST00000390520 SMIM13P0DJ93 91 aa2.36□□□□□ -2.03
TRAJ17-201ENST00000390520 PIPP12273 146 aaPredicted RBP2.36□□□□□ -2.03
TRAJ17-201ENST00000390520 ZNF20P17024 532 aa2.36□□□□□ -2.03
TRAJ17-201ENST00000390520 PEBP1P30086 187 aaKnown RBP2.36□□□□□ -2.03
TRAJ17-201ENST00000390520 FXYD7P58549 80 aa2.36□□□□□ -2.03
TRAJ17-201ENST00000390520 SNRPFP62306 86 aaKnown RBP2.36□□□□□ -2.03
TRAJ17-201ENST00000390520 RHOHQ15669 191 aa2.36□□□□□ -2.03
TRAJ17-201ENST00000390520 IL17AQ16552 155 aa2.36□□□□□ -2.03
TRAJ17-201ENST00000390520 C2orf83Q53S99 150 aa2.36□□□□□ -2.03
TRAJ17-201ENST00000390520 TREML4Q6UXN2 200 aa2.36□□□□□ -2.03
TRAJ17-201ENST00000390520 TMEM136Q6ZRR5 245 aa2.36□□□□□ -2.03
TRAJ17-201ENST00000390520 SMIM5Q71RC9 77 aa2.36□□□□□ -2.03
TRAJ17-201ENST00000390520 CHCHD7Q9BUK0 85 aa2.36□□□□□ -2.03
TRAJ17-201ENST00000390520 NXT2Q9NPJ8 142 aaKnown RBP2.36□□□□□ -2.03
TRAJ17-201ENST00000390520 MAST1Q9Y2H9 1570 aa2.36□□□□□ -2.03
TRAJ17-201ENST00000390520 NACAE9PAV3 2078 aa2.35□□□□□ -2.03
TRAJ17-201ENST00000390520 AGRNO00468 2067 aa2.35□□□□□ -2.03
TRAJ17-201ENST00000390520 CRB1P82279 1406 aa2.35□□□□□ -2.03
TRAJ17-201ENST00000390520 TRPM7Q96QT4 1865 aa2.35□□□□□ -2.03
TRAJ17-201ENST00000390520 CLTCQ00610 1675 aaKnown RBP2.35□□□□□ -2.03
TRAJ17-201ENST00000390520 IGHV3-49A0A0A0MS15 119 aa2.35□□□□□ -2.03
TRAJ17-201ENST00000390520 TCRBV4S1A1TA0A5B7 111 aa2.35□□□□□ -2.03
TRAJ17-201ENST00000390520 C17orf51A8MQB3 221 aa2.35□□□□□ -2.03
TRAJ17-201ENST00000390520 SNRPGP15A8MWD9 76 aa2.35□□□□□ -2.03
TRAJ17-201ENST00000390520 FAM72CH0Y354 149 aa2.35□□□□□ -2.03
TRAJ17-201ENST00000390520 GNRH2O43555 120 aa2.35□□□□□ -2.03
TRAJ17-201ENST00000390520 NPYP01303 97 aa2.35□□□□□ -2.03
TRAJ17-201ENST00000390520 IGLV3-25P01717 112 aa2.35□□□□□ -2.03
TRAJ17-201ENST00000390520 HSPB1P04792 205 aaKnown RBP2.35□□□□□ -2.03
TRAJ17-201ENST00000390520 ACYP1P07311 99 aa2.35□□□□□ -2.03
TRAJ17-201ENST00000390520 PIRTP0C851 137 aa2.35□□□□□ -2.03
TRAJ17-201ENST00000390520 PTHLHP12272 177 aa2.35□□□□□ -2.03
TRAJ17-201ENST00000390520 LCE2AQ5TA79 106 aaPredicted RBP2.35□□□□□ -2.03
TRAJ17-201ENST00000390520 FAM72DQ6L9T8 149 aa2.35□□□□□ -2.03
TRAJ17-201ENST00000390520 Q6P435 159 aa2.35□□□□□ -2.03
TRAJ17-201ENST00000390520 ADM2Q7Z4H4 148 aa2.35□□□□□ -2.03
TRAJ17-201ENST00000390520 CNEP1R1Q8N9A8 125 aa2.35□□□□□ -2.03
TRAJ17-201ENST00000390520 SMCR5Q8TEV8 140 aa2.35□□□□□ -2.03
TRAJ17-201ENST00000390520 TMEM190Q8WZ59 177 aa2.35□□□□□ -2.03
TRAJ17-201ENST00000390520 CHCHD1Q96BP2 118 aaKnown RBP2.35□□□□□ -2.03
TRAJ17-201ENST00000390520 SCRT2Q9NQ03 307 aa2.35□□□□□ -2.03
TRAJ17-201ENST00000390520 HIGD1BQ9P298 99 aa2.35□□□□□ -2.03
TRAJ17-201ENST00000390520 DEC1Q9P2X7 70 aa2.35□□□□□ -2.03
TRAJ17-201ENST00000390520 THADAQ6YHU6 1953 aa2.35□□□□□ -2.03
TRAJ17-201ENST00000390520 STRCP1A6NGW2 1772 aa2.35□□□□□ -2.03
TRAJ17-201ENST00000390520 CEP170BQ9Y4F5 1589 aaPredicted RBP2.35□□□□□ -2.03
TRAJ17-201ENST00000390520 PLXNA3P51805 1871 aa2.35□□□□□ -2.03
TRAJ17-201ENST00000390520 NYNRINQ9P2P1 1898 aaKnown RBP2.35□□□□□ -2.03
TRAJ17-201ENST00000390520 PTPRMP28827 1452 aa2.34□□□□□ -2.03
TRAJ17-201ENST00000390520 TDRD6O60522 2096 aaKnown RBP2.34□□□□□ -2.03
TRAJ17-201ENST00000390520 EHBP1L1Q8N3D4 1523 aa2.34□□□□□ -2.03
TRAJ17-201ENST00000390520 IGKV6D-41A0A0C4DH26 115 aa2.34□□□□□ -2.03
TRAJ17-201ENST00000390520 IGHV1-24A0A0C4DH33 117 aa2.34□□□□□ -2.03
TRAJ17-201ENST00000390520 IGHV5-51A0A0C4DH38 117 aa2.34□□□□□ -2.03
TRAJ17-201ENST00000390520 IGHV5-10-1A0A0J9YXX1 117 aa2.34□□□□□ -2.03
TRAJ17-201ENST00000390520 K7ERS5 55 aa2.34□□□□□ -2.03
TRAJ17-201ENST00000390520 BCE1O60756 84 aa2.34□□□□□ -2.03
TRAJ17-201ENST00000390520 IGHV1-69P01742 117 aa2.34□□□□□ -2.03
TRAJ17-201ENST00000390520 SLC25A16P16260 332 aa2.34□□□□□ -2.03
TRAJ17-201ENST00000390520 EFNA4P52798 201 aa2.34□□□□□ -2.03
TRAJ17-201ENST00000390520 RBM3P98179 157 aaKnown RBP2.34□□□□□ -2.03
TRAJ17-201ENST00000390520 FHL2Q14192 279 aa2.34□□□□□ -2.03
TRAJ17-201ENST00000390520 MIAQ16674 131 aa2.34□□□□□ -2.03
TRAJ17-201ENST00000390520 C19orf48Q6RUI8 117 aa2.34□□□□□ -2.03
TRAJ17-201ENST00000390520 LYPD5Q6UWN5 251 aa2.34□□□□□ -2.03
TRAJ17-201ENST00000390520 SDIM1Q6ZPB5 146 aa2.34□□□□□ -2.03
TRAJ17-201ENST00000390520 C2orf91Q6ZV80 131 aa2.34□□□□□ -2.03
TRAJ17-201ENST00000390520 Q8NBF4 154 aa2.34□□□□□ -2.03
TRAJ17-201ENST00000390520 Q8NDZ9 215 aa2.34□□□□□ -2.03
TRAJ17-201ENST00000390520 TVP23CQ96ET8 276 aa2.34□□□□□ -2.03
TRAJ17-201ENST00000390520 RETNLBQ9BQ08 111 aa2.34□□□□□ -2.03
TRAJ17-201ENST00000390520 LINC00467Q9BRT7 94 aa2.34□□□□□ -2.03
TRAJ17-201ENST00000390520 RPP21Q9H633 154 aaKnown RBP2.34□□□□□ -2.03
TRAJ17-201ENST00000390520 LINC00474Q9P2X8 69 aa2.34□□□□□ -2.03
TRAJ17-201ENST00000390520 MYO5AQ9Y4I1 1855 aaKnown RBP2.34□□□□□ -2.03
TRAJ17-201ENST00000390520 ZNF646O15015 1829 aaPredicted RBP2.33□□□□□ -2.04
TRAJ17-201ENST00000390520 EFCAB6Q5THR3 1501 aa2.33□□□□□ -2.04
TRAJ17-201ENST00000390520 ZNF407Q9C0G0 2248 aa2.33□□□□□ -2.04
TRAJ17-201ENST00000390520 TRAV13-2A0A0B4J235 113 aa2.33□□□□□ -2.04
TRAJ17-201ENST00000390520 PIGBOS1A0A0B4J2F0 54 aa2.33□□□□□ -2.04
TRAJ17-201ENST00000390520 A0A1B0GVX0 72 aa2.33□□□□□ -2.04
TRAJ17-201ENST00000390520 A8MWP4 228 aa2.33□□□□□ -2.04
TRAJ17-201ENST00000390520 H7BZZ5 65 aa2.33□□□□□ -2.04
TRAJ17-201ENST00000390520 LECT2O14960 151 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms