RNA–Protein interactions for RNA: ENST00000390495.1

TRAJ42-201, Transcript of T cell receptor alpha joining 42, humanhuman

APPRIS P1 BASIC

Gene TRAJ42, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ42-201ENST00000390495 LIMS3P0CW19 117 aa-5.55□□□□□ -3.3
TRAJ42-201ENST00000390495 LIMS4P0CW20 117 aa-5.55□□□□□ -3.3
TRAJ42-201ENST00000390495 IAH1Q2TAA2 248 aaPredicted RBP-5.55□□□□□ -3.3
TRAJ42-201ENST00000390495 SSX6Q7RTT6 188 aa-5.55□□□□□ -3.3
TRAJ42-201ENST00000390495 EEF1AKMT1Q8WVE0 214 aa-5.55□□□□□ -3.3
TRAJ42-201ENST00000390495 ZFHX4Q86UP3 3567 aa-5.56□□□□□ -3.3
TRAJ42-201ENST00000390495 TRBV10-1A0A0K0K1A3 114 aa-5.56□□□□□ -3.3
TRAJ42-201ENST00000390495 J3KT08 172 aa-5.56□□□□□ -3.3
TRAJ42-201ENST00000390495 NOL3O60936 208 aaKnown RBP-5.56□□□□□ -3.3
TRAJ42-201ENST00000390495 IDO1P14902 403 aa-5.56□□□□□ -3.3
TRAJ42-201ENST00000390495 ITGB3BPQ13352 177 aaPredicted RBP-5.56□□□□□ -3.3
TRAJ42-201ENST00000390495 HLA-DRB5Q30154 266 aa-5.56□□□□□ -3.3
TRAJ42-201ENST00000390495 EIF5AL1Q6IS14 154 aaKnown RBP-5.56□□□□□ -3.3
TRAJ42-201ENST00000390495 HRCT1Q6UXD1 115 aa-5.56□□□□□ -3.3
TRAJ42-201ENST00000390495 FAM172AQ8WUF8 416 aa-5.56□□□□□ -3.3
TRAJ42-201ENST00000390495 KCTD7Q96MP8 289 aa-5.56□□□□□ -3.3
TRAJ42-201ENST00000390495 CIB3Q96Q77 187 aaPredicted RBP-5.56□□□□□ -3.3
TRAJ42-201ENST00000390495 TMEM133Q9H2Q1 129 aa-5.56□□□□□ -3.3
TRAJ42-201ENST00000390495 OR51I2Q9H344 312 aa-5.56□□□□□ -3.3
TRAJ42-201ENST00000390495 PAPPA2Q9BXP8 1791 aa-5.57□□□□□ -3.3
TRAJ42-201ENST00000390495 MAP3K1Q13233 1512 aa-5.57□□□□□ -3.3
TRAJ42-201ENST00000390495 C3orf85A0A1B0GTC6 90 aa-5.57□□□□□ -3.3
TRAJ42-201ENST00000390495 SSSCA1O60232 199 aa-5.57□□□□□ -3.3
TRAJ42-201ENST00000390495 LYPLA2O95372 231 aa-5.57□□□□□ -3.3
TRAJ42-201ENST00000390495 ORM1P02763 201 aa-5.57□□□□□ -3.3
TRAJ42-201ENST00000390495 CXCR4P61073 352 aa-5.57□□□□□ -3.3
TRAJ42-201ENST00000390495 UBE2D3P61077 147 aa-5.57□□□□□ -3.3
TRAJ42-201ENST00000390495 RANP62826 216 aaKnown RBP-5.57□□□□□ -3.3
TRAJ42-201ENST00000390495 UBE2D2P62837 147 aa-5.57□□□□□ -3.3
TRAJ42-201ENST00000390495 PHF5AQ7RTV0 110 aaKnown RBP-5.57□□□□□ -3.3
TRAJ42-201ENST00000390495 SYCE1Q8N0S2 351 aa-5.57□□□□□ -3.3
TRAJ42-201ENST00000390495 OR8J3Q8NGG0 315 aa-5.57□□□□□ -3.3
TRAJ42-201ENST00000390495 CERS2Q96G23 380 aa-5.57□□□□□ -3.3
TRAJ42-201ENST00000390495 EFCAB11Q9BUY7 163 aa-5.57□□□□□ -3.3
TRAJ42-201ENST00000390495 DOCK5Q9H7D0 1870 aa-5.58□□□□□ -3.3
TRAJ42-201ENST00000390495 TMEM189A5PLL7 270 aa-5.58□□□□□ -3.3
TRAJ42-201ENST00000390495 H0Y8G0 127 aa-5.58□□□□□ -3.3
TRAJ42-201ENST00000390495 BAG2O95816 211 aa-5.58□□□□□ -3.3
TRAJ42-201ENST00000390495 OR2H2O95918 312 aa-5.58□□□□□ -3.3
TRAJ42-201ENST00000390495 HLA-EP13747 358 aa-5.58□□□□□ -3.3
TRAJ42-201ENST00000390495 SULT1E1P49888 294 aa-5.58□□□□□ -3.3
TRAJ42-201ENST00000390495 RAB5BP61020 215 aa-5.58□□□□□ -3.3
TRAJ42-201ENST00000390495 FLOT2Q14254 428 aa-5.58□□□□□ -3.3
TRAJ42-201ENST00000390495 DEFB125Q8N687 156 aa-5.58□□□□□ -3.3
TRAJ42-201ENST00000390495 FMN2Q9NZ56 1722 aa-5.58□□□□□ -3.3
TRAJ42-201ENST00000390495 IFT172Q9UG01 1749 aa-5.58□□□□□ -3.3
TRAJ42-201ENST00000390495 A0A1B0GTQ1 180 aa-5.59□□□□□ -3.3
TRAJ42-201ENST00000390495 CXCL11O14625 94 aa-5.59□□□□□ -3.3
TRAJ42-201ENST00000390495 CLDN12P56749 244 aa-5.59□□□□□ -3.3
TRAJ42-201ENST00000390495 COX7B2Q8TF08 81 aa-5.59□□□□□ -3.3
TRAJ42-201ENST00000390495 MRPL22Q9NWU5 206 aaKnown RBP-5.59□□□□□ -3.3
TRAJ42-201ENST00000390495 EXTL2Q9UBQ6 330 aa-5.59□□□□□ -3.3
TRAJ42-201ENST00000390495 HECW1Q76N89 1606 aa-5.59□□□□□ -3.3
TRAJ42-201ENST00000390495 TCRBV3S1A0A5B6 114 aa-5.6□□□□□ -3.31
TRAJ42-201ENST00000390495 STX10O60499 249 aa-5.6□□□□□ -3.31
TRAJ42-201ENST00000390495 NQO2P16083 231 aa-5.6□□□□□ -3.31
TRAJ42-201ENST00000390495 SNX29P2Q8IUI4 249 aa-5.6□□□□□ -3.31
TRAJ42-201ENST00000390495 COMMD1Q8N668 190 aa-5.6□□□□□ -3.31
TRAJ42-201ENST00000390495 DNAJB3Q8WWF6 145 aa-5.6□□□□□ -3.31
TRAJ42-201ENST00000390495 BPIFA3Q9BQP9 254 aa-5.6□□□□□ -3.31
TRAJ42-201ENST00000390495 C19orf12Q9NSK7 152 aa-5.6□□□□□ -3.31
TRAJ42-201ENST00000390495 KIAA0232Q92628 1395 aa-5.6□□□□□ -3.31
TRAJ42-201ENST00000390495 RIMS2Q9UQ26 1411 aa-5.6□□□□□ -3.31
TRAJ42-201ENST00000390495 PCF11O94913 1555 aaKnown RBP-5.6□□□□□ -3.31
TRAJ42-201ENST00000390495 CRYZL1O95825 349 aa-5.61□□□□□ -3.31
TRAJ42-201ENST00000390495 HIST1H3AP68431 136 aa-5.61□□□□□ -3.31
TRAJ42-201ENST00000390495 TMED1Q13445 227 aa-5.61□□□□□ -3.31
TRAJ42-201ENST00000390495 C6orf183Q5T699 404 aa-5.61□□□□□ -3.31
TRAJ42-201ENST00000390495 HIST2H3PS2Q5TEC6 136 aa-5.61□□□□□ -3.31
TRAJ42-201ENST00000390495 CDC42BPGQ6DT37 1551 aa-5.61□□□□□ -3.31
TRAJ42-201ENST00000390495 PIGXQ8TBF5 258 aa-5.61□□□□□ -3.31
TRAJ42-201ENST00000390495 STAG3L4Q8TBR4 150 aa-5.61□□□□□ -3.31
TRAJ42-201ENST00000390495 NEO1Q92859 1461 aa-5.61□□□□□ -3.31
TRAJ42-201ENST00000390495 NPCDR1Q9BY65 106 aa-5.61□□□□□ -3.31
TRAJ42-201ENST00000390495 KIAA0556O60303 1618 aa-5.62□□□□□ -3.31
TRAJ42-201ENST00000390495 DEFA3P59666 94 aa-5.62□□□□□ -3.31
TRAJ42-201ENST00000390495 AP3S2P59780 193 aa-5.62□□□□□ -3.31
TRAJ42-201ENST00000390495 AHSA2Q719I0 299 aa-5.62□□□□□ -3.31
TRAJ42-201ENST00000390495 OR8J2Q8NGG1 315 aa-5.62□□□□□ -3.31
TRAJ42-201ENST00000390495 LGALS14Q8TCE9 139 aa-5.62□□□□□ -3.31
TRAJ42-201ENST00000390495 DIRAS2Q96HU8 199 aa-5.62□□□□□ -3.31
TRAJ42-201ENST00000390495 TMEM56-RWDD3S4R434 201 aa-5.62□□□□□ -3.31
TRAJ42-201ENST00000390495 CICQ96RK0 1608 aaPredicted RBP-5.63□□□□□ -3.31
TRAJ42-201ENST00000390495 PRUNE2Q8WUY3 3088 aa-5.63□□□□□ -3.31
TRAJ42-201ENST00000390495 HMGXB3Q12766 1538 aa-5.63□□□□□ -3.31
TRAJ42-201ENST00000390495 FGD6Q6ZV73 1430 aa-5.63□□□□□ -3.31
TRAJ42-201ENST00000390495 H0YJX3 145 aa-5.63□□□□□ -3.31
TRAJ42-201ENST00000390495 ADAP1O75689 374 aa-5.63□□□□□ -3.31
TRAJ42-201ENST00000390495 LDOC1O95751 146 aaPredicted RBP-5.63□□□□□ -3.31
TRAJ42-201ENST00000390495 DAOAP59103 153 aa-5.63□□□□□ -3.31
TRAJ42-201ENST00000390495 DNAJB13P59910 316 aa-5.63□□□□□ -3.31
TRAJ42-201ENST00000390495 BLIDQ8IZY5 108 aa-5.63□□□□□ -3.31
TRAJ42-201ENST00000390495 WFDC6Q9BQY6 131 aa-5.63□□□□□ -3.31
TRAJ42-201ENST00000390495 KIF13AQ9H1H9 1805 aa-5.63□□□□□ -3.31
TRAJ42-201ENST00000390495 PHIPQ8WWQ0 1821 aa-5.64□□□□□ -3.31
TRAJ42-201ENST00000390495 KPNA3O00505 521 aaPredicted RBP-5.64□□□□□ -3.31
TRAJ42-201ENST00000390495 SLC35E2BP0CK96 405 aa-5.64□□□□□ -3.31
TRAJ42-201ENST00000390495 CDC42EP2O14613 210 aa-5.65□□□□□ -3.31
TRAJ42-201ENST00000390495 IL3P08700 152 aa-5.65□□□□□ -3.31
TRAJ42-201ENST00000390495 SMIM10L2AP0DMW4 78 aa-5.65□□□□□ -3.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms