RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 MED21Q13503 144 aa-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 OR2F1Q13607 317 aa-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 FAM74A4Q5TZK3 123 aa-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 SPAG11AQ6PDA7 123 aa-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 LYPD5Q6UWN5 251 aa-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 FAM216BQ8N7L0 139 aa-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 OR5AK2Q8NH90 309 aa-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 PPP1R1CQ8WVI7 109 aa-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 BORCS7Q96B45 105 aa-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 DMAC1Q96GE9 116 aa-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 CIB3Q96Q77 187 aaPredicted RBP-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 MRPS26Q9BYN8 205 aaKnown RBP-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 RNASE7Q9H1E1 156 aaKnown RBP-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 BET1LQ9NYM9 111 aa-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 TPRKBQ9Y3C4 175 aa-0.72□□□□□ -2.52
SNORD28-201ENST00000384706 FASNP49327 2511 aaKnown RBP-0.72□□□□□ -2.53
SNORD28-201ENST00000384706 HECTD1Q9ULT8 2610 aa-0.72□□□□□ -2.53
SNORD28-201ENST00000384706 PIK3C2GO75747 1445 aa-0.72□□□□□ -2.53
SNORD28-201ENST00000384706 ADGRL3Q9HAR2 1447 aa-0.72□□□□□ -2.53
SNORD28-201ENST00000384706 UBR2Q8IWV8 1755 aa-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 PKHD1P08F94 4074 aa-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 SNAPC4Q5SXM2 1469 aa-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 TRBV19A0A075B6N1 114 aa-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 FXYD6-FXYD2A0A087WZ82 144 aa-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 A0A0A6YYH2 397 aa-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 TRAV5A0A0B4J249 113 aa-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 A6NJ64 397 aa-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 M0R2T5 61 aa-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 CDC42EP2O14613 210 aa-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 PDE6DO43924 150 aa-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 DEXIO95424 95 aa-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 IFNA7P01567 189 aa-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 MT-ND6P03923 174 aa-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 CCKP06307 115 aa-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 TPM1P09493 284 aa-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 HIST1H1EP10412 219 aaKnown RBP-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 BCL2P10415 239 aa-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 COX4I1P13073 169 aa-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 ACYP2P14621 99 aa-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 FABP4P15090 132 aa-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 SDC4P31431 198 aa-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 OMPP47874 163 aa-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 TAS2R41P59536 307 aa-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 ELOF1P60002 83 aaKnown RBP-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 FADDQ13158 208 aa-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 POU6F1Q14863 301 aa-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 IAH1Q2TAA2 248 aaPredicted RBP-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 FAM151BQ6UXP7 276 aa-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 Q6ZRX8 168 aa-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 FAM9CQ8IZT9 166 aa-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 TMEM229BQ8NBD8 167 aa-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 OR4B1Q8NGF8 309 aa-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 OR8J3Q8NGG0 315 aa-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 ATG5Q9H1Y0 275 aa-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 CHMP4BQ9H444 224 aaKnown RBP-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 VPS29Q9UBQ0 182 aa-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 ASB4Q9Y574 426 aa-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 USP54Q70EL1 1684 aa-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 ARHGAP31Q2M1Z3 1444 aa-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 FGD6Q6ZV73 1430 aa-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 C10orf71Q711Q0 1435 aa-0.73□□□□□ -2.53
SNORD28-201ENST00000384706 PIK3C2AO00443 1686 aa-0.74□□□□□ -2.53
SNORD28-201ENST00000384706 TEX49A0A1B0GTD5 131 aa-0.74□□□□□ -2.53
SNORD28-201ENST00000384706 C5orf58C9J3I9 102 aa-0.74□□□□□ -2.53
SNORD28-201ENST00000384706 BANF1O75531 89 aa-0.74□□□□□ -2.53
SNORD28-201ENST00000384706 CST7O76096 145 aa-0.74□□□□□ -2.53
SNORD28-201ENST00000384706 SERPINA1P01009 418 aa-0.74□□□□□ -2.53
SNORD28-201ENST00000384706 TRACP01848 142 aa-0.74□□□□□ -2.53
SNORD28-201ENST00000384706 DNAJB13P59910 316 aa-0.74□□□□□ -2.53
SNORD28-201ENST00000384706 SKP1P63208 163 aa-0.74□□□□□ -2.53
SNORD28-201ENST00000384706 MSMO1Q15800 293 aa-0.74□□□□□ -2.53
SNORD28-201ENST00000384706 OTUD6BQ8N6M0 293 aa-0.74□□□□□ -2.53
SNORD28-201ENST00000384706 PTH2Q96A98 100 aa-0.74□□□□□ -2.53
SNORD28-201ENST00000384706 TRIM4Q9C037 500 aa-0.74□□□□□ -2.53
SNORD28-201ENST00000384706 USE1Q9NZ43 259 aa-0.74□□□□□ -2.53
SNORD28-201ENST00000384706 SLC22A13Q9Y226 551 aa-0.74□□□□□ -2.53
SNORD28-201ENST00000384706 SPG11Q96JI7 2443 aa-0.74□□□□□ -2.53
SNORD28-201ENST00000384706 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.74□□□□□ -2.53
SNORD28-201ENST00000384706 TSC2P49815 1807 aa-0.75□□□□□ -2.53
SNORD28-201ENST00000384706 MYO18BQ8IUG5 2567 aa-0.75□□□□□ -2.53
SNORD28-201ENST00000384706 A0A087WUJ7 227 aa-0.75□□□□□ -2.53
SNORD28-201ENST00000384706 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-0.75□□□□□ -2.53
SNORD28-201ENST00000384706 TRBV7-1A0A0A6YYK4 115 aa-0.75□□□□□ -2.53
SNORD28-201ENST00000384706 CLDN24A6NM45 220 aa-0.75□□□□□ -2.53
SNORD28-201ENST00000384706 TMEM14DPA8MWL7 114 aa-0.75□□□□□ -2.53
SNORD28-201ENST00000384706 HMGB3O15347 200 aaKnown RBP-0.75□□□□□ -2.53
SNORD28-201ENST00000384706 EDF1O60869 148 aaKnown RBP-0.75□□□□□ -2.53
SNORD28-201ENST00000384706 TNFP01375 233 aa-0.75□□□□□ -2.53
SNORD28-201ENST00000384706 APOC1P02654 83 aa-0.75□□□□□ -2.53
SNORD28-201ENST00000384706 SERPINA6P08185 405 aa-0.75□□□□□ -2.53
SNORD28-201ENST00000384706 PTMSP20962 102 aa-0.75□□□□□ -2.53
SNORD28-201ENST00000384706 INSL3P51460 131 aa-0.75□□□□□ -2.53
SNORD28-201ENST00000384706 HADHBP55084 474 aaKnown RBP-0.75□□□□□ -2.53
SNORD28-201ENST00000384706 NDUFA6P56556 154 aa-0.75□□□□□ -2.53
SNORD28-201ENST00000384706 HAMPP81172 84 aa-0.75□□□□□ -2.53
SNORD28-201ENST00000384706 RHOHQ15669 191 aa-0.75□□□□□ -2.53
SNORD28-201ENST00000384706 AKIRIN2Q53H80 203 aa-0.75□□□□□ -2.53
SNORD28-201ENST00000384706 UNQ5815/PRO19632Q6UWF5 114 aa-0.75□□□□□ -2.53
SNORD28-201ENST00000384706 CLDN22Q8N7P3 220 aa-0.75□□□□□ -2.53
SNORD28-201ENST00000384706 OR5A2Q8NGI9 324 aa-0.75□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms