RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 Q8N9W7 124 aa12.56□□□□□ -0.4
NKX3-1-201ENST00000380871 PSMG3-AS1Q96PY0 264 aa12.56□□□□□ -0.4
NKX3-1-201ENST00000380871 A1L4Q6 167 aa12.55□□□□□ -0.4
NKX3-1-201ENST00000380871 IGHV4-39P01824 125 aa12.55□□□□□ -0.4
NKX3-1-201ENST00000380871 IL17RELQ6ZVW7 336 aa12.55□□□□□ -0.4
NKX3-1-201ENST00000380871 S100A7P31151 101 aa12.55□□□□□ -0.4
NKX3-1-201ENST00000380871 C15orf32Q32M92 178 aa12.55□□□□□ -0.4
NKX3-1-201ENST00000380871 CLEC3BP05452 202 aa12.54□□□□□ -0.4
NKX3-1-201ENST00000380871 CLEC19AQ6UXS0 136 aa12.54□□□□□ -0.4
NKX3-1-201ENST00000380871 UTP20O75691 2785 aaKnown RBP12.54□□□□□ -0.4
NKX3-1-201ENST00000380871 DOPEY2Q9Y3R5 2298 aa12.54□□□□□ -0.4
NKX3-1-201ENST00000380871 PPBPP02775 128 aa12.54□□□□□ -0.4
NKX3-1-201ENST00000380871 LEPP41159 167 aa12.54□□□□□ -0.4
NKX3-1-201ENST00000380871 CRYBG3Q68DQ2 2970 aa12.54□□□□□ -0.4
NKX3-1-201ENST00000380871 K7EMI3 77 aa12.54□□□□□ -0.4
NKX3-1-201ENST00000380871 OR1N2Q8NGR9 330 aa12.53□□□□□ -0.4
NKX3-1-201ENST00000380871 TRAV40A0A0B4J280 105 aa12.53□□□□□ -0.4
NKX3-1-201ENST00000380871 TRGV3P03979 118 aa12.53□□□□□ -0.4
NKX3-1-201ENST00000380871 COX8CQ7Z4L0 72 aa12.53□□□□□ -0.4
NKX3-1-201ENST00000380871 ZNF48Q96MX3 618 aaPredicted RBP12.53□□□□□ -0.4
NKX3-1-201ENST00000380871 C11orf21Q9P2W6 132 aa12.53□□□□□ -0.4
NKX3-1-201ENST00000380871 C9orf118A6NHY6 69 aa12.52□□□□□ -0.4
NKX3-1-201ENST00000380871 BMI1P35226 326 aa12.52□□□□□ -0.4
NKX3-1-201ENST00000380871 MINOS1Q5TGZ0 78 aa12.52□□□□□ -0.4
NKX3-1-201ENST00000380871 DPF1Q92782 380 aa12.52□□□□□ -0.4
NKX3-1-201ENST00000380871 MINOS1-NBL1R4GNA1 71 aa12.52□□□□□ -0.4
NKX3-1-201ENST00000380871 TRAV26-2A0A0B4J265 109 aa12.52□□□□□ -0.41
NKX3-1-201ENST00000380871 IGHV4-61A0A0C4DH41 118 aa12.52□□□□□ -0.41
NKX3-1-201ENST00000380871 UFSP1Q6NVU6 142 aa12.52□□□□□ -0.41
NKX3-1-201ENST00000380871 MAP1LC3AQ9H492 121 aa12.52□□□□□ -0.41
NKX3-1-201ENST00000380871 A0A0G2JLM5 398 aa12.52□□□□□ -0.41
NKX3-1-201ENST00000380871 NPFFO15130 113 aa12.52□□□□□ -0.41
NKX3-1-201ENST00000380871 TNFRSF6BO95407 300 aa12.52□□□□□ -0.41
NKX3-1-201ENST00000380871 PRB1P04280 392 aa12.52□□□□□ -0.41
NKX3-1-201ENST00000380871 UBE2E1P51965 193 aa12.52□□□□□ -0.41
NKX3-1-201ENST00000380871 RPS20P60866 119 aaKnown RBP12.52□□□□□ -0.41
NKX3-1-201ENST00000380871 S100A7AQ86SG5 101 aa12.52□□□□□ -0.41
NKX3-1-201ENST00000380871 AP1S3Q96PC3 154 aa12.52□□□□□ -0.41
NKX3-1-201ENST00000380871 HSD52Q0P140 79 aa12.51□□□□□ -0.41
NKX3-1-201ENST00000380871 Q8N6K4 173 aa12.51□□□□□ -0.41
NKX3-1-201ENST00000380871 A6NDN8 102 aa12.51□□□□□ -0.41
NKX3-1-201ENST00000380871 H3BRM9 83 aa12.51□□□□□ -0.41
NKX3-1-201ENST00000380871 ATP5J2P56134 94 aa12.51□□□□□ -0.41
NKX3-1-201ENST00000380871 IGKV3D-20A0A0C4DH25 116 aa12.5□□□□□ -0.41
NKX3-1-201ENST00000380871 CENPVL3A0A0U1RRI6 287 aa12.5□□□□□ -0.41
NKX3-1-201ENST00000380871 ODF1Q14990 250 aa12.5□□□□□ -0.41
NKX3-1-201ENST00000380871 IGSF10Q6WRI0 2623 aa12.5□□□□□ -0.41
NKX3-1-201ENST00000380871 FABP5P3A8MUU1 101 aa12.5□□□□□ -0.41
NKX3-1-201ENST00000380871 C1orf122Q6ZSJ8 110 aa12.5□□□□□ -0.41
NKX3-1-201ENST00000380871 CCL19Q99731 98 aa12.5□□□□□ -0.41
NKX3-1-201ENST00000380871 MEGF9Q9H1U4 602 aa12.5□□□□□ -0.41
NKX3-1-201ENST00000380871 K7ERJ3 54 aa12.5□□□□□ -0.41
NKX3-1-201ENST00000380871 PRSS1P07477 247 aa12.5□□□□□ -0.41
NKX3-1-201ENST00000380871 TMEM158Q8WZ71 300 aa12.5□□□□□ -0.41
NKX3-1-201ENST00000380871 HHLA3Q9XRX5 114 aa12.5□□□□□ -0.41
NKX3-1-201ENST00000380871 RIPPLY3P57055 190 aa12.49□□□□□ -0.41
NKX3-1-201ENST00000380871 GTSCR1Q86UQ5 136 aa12.49□□□□□ -0.41
NKX3-1-201ENST00000380871 OR9G4Q8NGQ1 327 aa12.49□□□□□ -0.41
NKX3-1-201ENST00000380871 TMEM190Q8WZ59 177 aa12.49□□□□□ -0.41
NKX3-1-201ENST00000380871 FBLL1A6NHQ2 334 aaKnown RBP12.49□□□□□ -0.41
NKX3-1-201ENST00000380871 SPRY2O43597 315 aa12.49□□□□□ -0.41
NKX3-1-201ENST00000380871 COTL1Q14019 142 aa12.49□□□□□ -0.41
NKX3-1-201ENST00000380871 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.49□□□□□ -0.41
NKX3-1-201ENST00000380871 LRRK2Q5S007 2527 aa12.49□□□□□ -0.41
NKX3-1-201ENST00000380871 IGKV3-7A0A075B6H7 116 aa12.49□□□□□ -0.41
NKX3-1-201ENST00000380871 GCSHP23434 173 aa12.49□□□□□ -0.41
NKX3-1-201ENST00000380871 FXYD2P54710 66 aa12.49□□□□□ -0.41
NKX3-1-201ENST00000380871 LCNL1Q6ZST4 164 aa12.49□□□□□ -0.41
NKX3-1-201ENST00000380871 MAPK1IP1LQ8NDC0 245 aa12.49□□□□□ -0.41
NKX3-1-201ENST00000380871 FOXC2Q99958 501 aa12.49□□□□□ -0.41
NKX3-1-201ENST00000380871 ZFAND3Q9H8U3 227 aa12.49□□□□□ -0.41
NKX3-1-201ENST00000380871 BUB3O43684 328 aa12.48□□□□□ -0.41
NKX3-1-201ENST00000380871 AJUBAQ96IF1 538 aa12.48□□□□□ -0.41
NKX3-1-201ENST00000380871 CNFNQ9BYD5 112 aa12.48□□□□□ -0.41
NKX3-1-201ENST00000380871 AGPAT4-IT1Q9H0P7 198 aa12.48□□□□□ -0.41
NKX3-1-201ENST00000380871 ZNF462Q96JM2 2506 aa12.48□□□□□ -0.41
NKX3-1-201ENST00000380871 CLPSL1A2RUU4 121 aa12.47□□□□□ -0.41
NKX3-1-201ENST00000380871 K7EP34 96 aa12.47□□□□□ -0.41
NKX3-1-201ENST00000380871 ABCA2Q9BZC7 2435 aa12.47□□□□□ -0.41
NKX3-1-201ENST00000380871 OOSP1A8MZH6 123 aa12.47□□□□□ -0.41
NKX3-1-201ENST00000380871 IGHV4-38-2P0DP08 117 aa12.47□□□□□ -0.41
NKX3-1-201ENST00000380871 FCER1GP30273 86 aa12.47□□□□□ -0.41
NKX3-1-201ENST00000380871 OR2K2Q8NGT1 345 aa12.47□□□□□ -0.41
NKX3-1-201ENST00000380871 ZNF502Q8TBZ5 544 aa12.47□□□□□ -0.41
NKX3-1-201ENST00000380871 UFC1Q9Y3C8 167 aa12.47□□□□□ -0.41
NKX3-1-201ENST00000380871 IGHV3-11P01762 117 aa12.47□□□□□ -0.41
NKX3-1-201ENST00000380871 OR4X2Q8NGF9 303 aa12.47□□□□□ -0.41
NKX3-1-201ENST00000380871 CCDC140Q96MF4 163 aa12.47□□□□□ -0.41
NKX3-1-201ENST00000380871 J3KRW8 73 aa12.46□□□□□ -0.41
NKX3-1-201ENST00000380871 LINC01559Q495D7 138 aa12.46□□□□□ -0.41
NKX3-1-201ENST00000380871 IGHV4-30-2A0A087WSY4 118 aa12.46□□□□□ -0.42
NKX3-1-201ENST00000380871 K7ERU9 68 aa12.46□□□□□ -0.42
NKX3-1-201ENST00000380871 GTF2H5Q6ZYL4 71 aa12.46□□□□□ -0.42
NKX3-1-201ENST00000380871 EBI3Q14213 229 aa12.45□□□□□ -0.42
NKX3-1-201ENST00000380871 SPCS1Q9Y6A9 102 aa12.45□□□□□ -0.42
NKX3-1-201ENST00000380871 DOPEY1Q5JWR5 2465 aa12.45□□□□□ -0.42
NKX3-1-201ENST00000380871 A0A1W2PPM0 123 aa12.45□□□□□ -0.42
NKX3-1-201ENST00000380871 ZC2HC1BQ5TFG8 222 aa12.45□□□□□ -0.42
NKX3-1-201ENST00000380871 TMEM160Q9NX00 188 aa12.45□□□□□ -0.42
NKX3-1-201ENST00000380871 TRAV8-2A0A0B4J237 113 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms