RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 SHANK2-AS3Q9BTD1 123 aa9.91□□□□□ -0.82
CHD3-203ENST00000380358 Q9H8V8 135 aa9.91□□□□□ -0.82
CHD3-203ENST00000380358 TRBV20-1A0A075B6N2 111 aa9.9□□□□□ -0.82
CHD3-203ENST00000380358 ELANEP08246 267 aa9.9□□□□□ -0.82
CHD3-203ENST00000380358 LYPD6BQ8NI32 183 aa9.9□□□□□ -0.82
CHD3-203ENST00000380358 MPLKIPQ8TAP9 179 aa9.9□□□□□ -0.82
CHD3-203ENST00000380358 TRAV13-2A0A0B4J235 113 aa9.9□□□□□ -0.82
CHD3-203ENST00000380358 FUSP35637 526 aaKnown RBP eCLIP9.9□□□□□ -0.82
CHD3-203ENST00000380358 LRP5O75197 1615 aa9.9□□□□□ -0.82
CHD3-203ENST00000380358 OOSP1A8MZH6 123 aa9.9□□□□□ -0.83
CHD3-203ENST00000380358 DEFB135Q30KP9 77 aa9.9□□□□□ -0.83
CHD3-203ENST00000380358 SPTSSBQ8NFR3 76 aa9.9□□□□□ -0.83
CHD3-203ENST00000380358 CYYR1Q96J86 154 aa9.9□□□□□ -0.83
CHD3-203ENST00000380358 TMEM141Q96I45 108 aa9.9□□□□□ -0.83
CHD3-203ENST00000380358 A0A0G2JRQ6 117 aa9.89□□□□□ -0.83
CHD3-203ENST00000380358 HIST2H2BCQ6DN03 193 aa9.89□□□□□ -0.83
CHD3-203ENST00000380358 LY6G6FQ5SQ64 297 aa9.89□□□□□ -0.83
CHD3-203ENST00000380358 BAALC-AS2P0C853 105 aa9.89□□□□□ -0.83
CHD3-203ENST00000380358 ICOSQ9Y6W8 199 aa9.89□□□□□ -0.83
CHD3-203ENST00000380358 C15orf62A8K5M9 175 aa9.89□□□□□ -0.83
CHD3-203ENST00000380358 NTN3O00634 580 aaPredicted RBP9.89□□□□□ -0.83
CHD3-203ENST00000380358 ANKRD29Q8N6D5 301 aa9.89□□□□□ -0.83
CHD3-203ENST00000380358 K7ENP7 123 aa9.89□□□□□ -0.83
CHD3-203ENST00000380358 A0A1B0GW64 132 aa9.88□□□□□ -0.83
CHD3-203ENST00000380358 HOXB4P17483 251 aaPredicted RBP9.88□□□□□ -0.83
CHD3-203ENST00000380358 TRPM7Q96QT4 1865 aa9.88□□□□□ -0.83
CHD3-203ENST00000380358 GRNP28799 593 aaKnown RBP9.88□□□□□ -0.83
CHD3-203ENST00000380358 EIF4EBP2Q13542 120 aaPredicted RBP9.88□□□□□ -0.83
CHD3-203ENST00000380358 HRCT1Q6UXD1 115 aa9.88□□□□□ -0.83
CHD3-203ENST00000380358 PSME4Q14997 1843 aa9.88□□□□□ -0.83
CHD3-203ENST00000380358 IGKV1-6A0A0C4DH72 117 aa9.88□□□□□ -0.83
CHD3-203ENST00000380358 ZNF134P52741 427 aa9.88□□□□□ -0.83
CHD3-203ENST00000380358 C9orf66Q5T8R8 295 aa9.88□□□□□ -0.83
CHD3-203ENST00000380358 C17orf77Q96MU5 243 aa9.88□□□□□ -0.83
CHD3-203ENST00000380358 RHOHQ15669 191 aa9.88□□□□□ -0.83
CHD3-203ENST00000380358 H3BMG7 143 aa9.88□□□□□ -0.83
CHD3-203ENST00000380358 Q6P435 159 aa9.88□□□□□ -0.83
CHD3-203ENST00000380358 ORMDL1Q9P0S3 153 aa9.88□□□□□ -0.83
CHD3-203ENST00000380358 ACACAQ13085 2346 aa9.88□□□□□ -0.83
CHD3-203ENST00000380358 M0R2N4 97 aa9.87□□□□□ -0.83
CHD3-203ENST00000380358 ETV2O00321 342 aaPredicted RBP9.87□□□□□ -0.83
CHD3-203ENST00000380358 CRYGSP22914 178 aa9.87□□□□□ -0.83
CHD3-203ENST00000380358 HERVK_113P63121 156 aa9.87□□□□□ -0.83
CHD3-203ENST00000380358 DSCAML1Q8TD84 2053 aa9.87□□□□□ -0.83
CHD3-203ENST00000380358 A0A1B0GX51 115 aa9.87□□□□□ -0.83
CHD3-203ENST00000380358 STRCP1A6NGW2 1772 aa9.87□□□□□ -0.83
CHD3-203ENST00000380358 GATA3P23771 443 aa9.87□□□□□ -0.83
CHD3-203ENST00000380358 VSIG2Q96IQ7 327 aa9.87□□□□□ -0.83
CHD3-203ENST00000380358 IGLV3-9A0A075B6K5 115 aa9.87□□□□□ -0.83
CHD3-203ENST00000380358 TMEM14BQ9NUH8 114 aa9.87□□□□□ -0.83
CHD3-203ENST00000380358 MRPL35Q9NZE8 188 aaKnown RBP9.87□□□□□ -0.83
CHD3-203ENST00000380358 MRPL53Q96EL3 112 aaKnown RBP9.87□□□□□ -0.83
CHD3-203ENST00000380358 FGF16O43320 207 aa9.86□□□□□ -0.83
CHD3-203ENST00000380358 LINC00114Q6XXX2 140 aa9.86□□□□□ -0.83
CHD3-203ENST00000380358 KLK5Q9Y337 293 aaPredicted RBP9.86□□□□□ -0.83
CHD3-203ENST00000380358 EML6Q6ZMW3 1958 aa9.86□□□□□ -0.83
CHD3-203ENST00000380358 ETDBQ3ZM63 59 aa9.86□□□□□ -0.83
CHD3-203ENST00000380358 HIST2H2BDQ6DRA6 164 aa9.86□□□□□ -0.83
CHD3-203ENST00000380358 PLXND1Q9Y4D7 1925 aa9.86□□□□□ -0.83
CHD3-203ENST00000380358 XIRP1Q702N8 1843 aaKnown RBP9.86□□□□□ -0.83
CHD3-203ENST00000380358 DYNAPQ8N1N2 210 aa9.86□□□□□ -0.83
CHD3-203ENST00000380358 DLEC1Q9Y238 1755 aa9.85□□□□□ -0.83
CHD3-203ENST00000380358 HIGD2BQ4VC39 106 aa9.85□□□□□ -0.83
CHD3-203ENST00000380358 OR11H6Q8NGC7 330 aa9.85□□□□□ -0.83
CHD3-203ENST00000380358 GFI1Q99684 422 aa9.85□□□□□ -0.83
CHD3-203ENST00000380358 RNF5Q99942 180 aa9.85□□□□□ -0.83
CHD3-203ENST00000380358 SPART-AS1P0CW21 52 aa9.85□□□□□ -0.83
CHD3-203ENST00000380358 Q8N8P6 123 aa9.85□□□□□ -0.83
CHD3-203ENST00000380358 IGLV3-12A0A075B6K2 115 aa9.85□□□□□ -0.83
CHD3-203ENST00000380358 ZNF362Q5T0B9 420 aaPredicted RBP9.85□□□□□ -0.83
CHD3-203ENST00000380358 PCNX1Q96RV3 2341 aa9.85□□□□□ -0.83
CHD3-203ENST00000380358 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.85□□□□□ -0.83
CHD3-203ENST00000380358 NREPQ16612 68 aa9.85□□□□□ -0.83
CHD3-203ENST00000380358 IGHV7-4-1A0A0J9YVY3 117 aa9.84□□□□□ -0.83
CHD3-203ENST00000380358 IGHV4-38-2P0DP08 117 aa9.84□□□□□ -0.83
CHD3-203ENST00000380358 BTCP35070 178 aa9.84□□□□□ -0.83
CHD3-203ENST00000380358 KLK12Q9UKR0 248 aa9.84□□□□□ -0.83
CHD3-203ENST00000380358 SLAQ13239 276 aa9.84□□□□□ -0.83
CHD3-203ENST00000380358 FBLN5Q9UBX5 448 aa9.84□□□□□ -0.83
CHD3-203ENST00000380358 COX7A2LO14548 114 aa9.84□□□□□ -0.83
CHD3-203ENST00000380358 MLST8Q9BVC4 326 aa9.84□□□□□ -0.83
CHD3-203ENST00000380358 MRPL36Q9P0J6 103 aaKnown RBP9.84□□□□□ -0.83
CHD3-203ENST00000380358 TNRC6BQ9UPQ9 1833 aaKnown RBP9.84□□□□□ -0.83
CHD3-203ENST00000380358 IGHV4-30-4P0DP06 118 aa9.84□□□□□ -0.83
CHD3-203ENST00000380358 IGHV4-31P0DP07 118 aa9.84□□□□□ -0.83
CHD3-203ENST00000380358 MYLKQ15746 1914 aa9.84□□□□□ -0.83
CHD3-203ENST00000380358 LOC105371267A0A1B0GV96 52 aa9.84□□□□□ -0.83
CHD3-203ENST00000380358 MP68P56378 58 aa9.84□□□□□ -0.83
CHD3-203ENST00000380358 LYPD1Q8N2G4 141 aa9.84□□□□□ -0.83
CHD3-203ENST00000380358 DKK2Q9UBU2 259 aa9.84□□□□□ -0.83
CHD3-203ENST00000380358 PRO1854Q9UHT4 67 aa9.84□□□□□ -0.83
CHD3-203ENST00000380358 UBE2V1Q13404 147 aa9.84□□□□□ -0.83
CHD3-203ENST00000380358 UTF1Q5T230 341 aa9.84□□□□□ -0.83
CHD3-203ENST00000380358 SS18L2Q9UHA2 77 aa9.84□□□□□ -0.83
CHD3-203ENST00000380358 SPTAN1Q13813 2472 aaKnown RBP9.83□□□□□ -0.84
CHD3-203ENST00000380358 NDUFA4O00483 81 aa9.83□□□□□ -0.84
CHD3-203ENST00000380358 J3QQQ9 107 aa9.83□□□□□ -0.84
CHD3-203ENST00000380358 Q6ZRM9 215 aa9.83□□□□□ -0.84
CHD3-203ENST00000380358 Q6ZS92 163 aa9.83□□□□□ -0.84
CHD3-203ENST00000380358 CEND1Q8N111 149 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms