RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 RAB32Q13637 225 aa15.72■□□□□ 0.11
U2AF1-202ENST00000380276 MUC21Q5SSG8 566 aa15.72■□□□□ 0.11
U2AF1-202ENST00000380276 Q8TAT8 98 aa15.72■□□□□ 0.11
U2AF1-202ENST00000380276 ZNF492Q9P255 531 aa15.72■□□□□ 0.11
U2AF1-202ENST00000380276 HERC1Q15751 4861 aa15.71■□□□□ 0.11
U2AF1-202ENST00000380276 NMBP08949 121 aa15.71■□□□□ 0.11
U2AF1-202ENST00000380276 KRTAP10-1P60331 282 aa15.71■□□□□ 0.11
U2AF1-202ENST00000380276 ATP6V1FQ16864 119 aa15.71■□□□□ 0.11
U2AF1-202ENST00000380276 MIR17HGQ75NE6 70 aa15.71■□□□□ 0.11
U2AF1-202ENST00000380276 NUDT15Q9NV35 164 aa15.71■□□□□ 0.11
U2AF1-202ENST00000380276 MSRB1Q9NZV6 116 aa15.71■□□□□ 0.11
U2AF1-202ENST00000380276 NBEAP1P0C6P0 100 aa15.7■□□□□ 0.1
U2AF1-202ENST00000380276 SFTA3P0C7M3 94 aa15.7■□□□□ 0.1
U2AF1-202ENST00000380276 ZNF138P52744 262 aa15.7■□□□□ 0.1
U2AF1-202ENST00000380276 WFDC10BQ8IUB3 73 aa15.7■□□□□ 0.1
U2AF1-202ENST00000380276 THAP6Q8TBB0 222 aa15.7■□□□□ 0.1
U2AF1-202ENST00000380276 NPCDR1Q9BY65 106 aa15.7■□□□□ 0.1
U2AF1-202ENST00000380276 OR51M1Q9H341 326 aa15.7■□□□□ 0.1
U2AF1-202ENST00000380276 PLA2G10O15496 165 aa15.69■□□□□ 0.1
U2AF1-202ENST00000380276 OR10J4P0C629 311 aa15.69■□□□□ 0.1
U2AF1-202ENST00000380276 EVI2AP22794 236 aa15.69■□□□□ 0.1
U2AF1-202ENST00000380276 CHAC2Q8WUX2 184 aa15.69■□□□□ 0.1
U2AF1-202ENST00000380276 MRPL32Q9BYC8 188 aaKnown RBP15.69■□□□□ 0.1
U2AF1-202ENST00000380276 K7EQD1 137 aa15.68■□□□□ 0.1
U2AF1-202ENST00000380276 GYPEP15421 78 aa15.68■□□□□ 0.1
U2AF1-202ENST00000380276 SMR3BP02814 79 aaPredicted RBP15.67■□□□□ 0.1
U2AF1-202ENST00000380276 CSN1S1P47710 185 aa15.67■□□□□ 0.1
U2AF1-202ENST00000380276 ZNF479Q96JC4 524 aa15.67■□□□□ 0.1
U2AF1-202ENST00000380276 PAXXQ9BUH6 204 aa15.67■□□□□ 0.1
U2AF1-202ENST00000380276 PHYHIPLQ96FC7 376 aa15.66■□□□□ 0.1
U2AF1-202ENST00000380276 FAM167A-AS1Q96KT0 104 aa15.66■□□□□ 0.1
U2AF1-202ENST00000380276 SLC25A31Q9H0C2 315 aa15.66■□□□□ 0.1
U2AF1-202ENST00000380276 MDFICQ9P1T7 246 aa15.66■□□□□ 0.1
U2AF1-202ENST00000380276 H2AFB2P0C5Z0 115 aa15.65■□□□□ 0.1
U2AF1-202ENST00000380276 GCSHP23434 173 aa15.65■□□□□ 0.1
U2AF1-202ENST00000380276 HAMPP81172 84 aa15.65■□□□□ 0.1
U2AF1-202ENST00000380276 TMEM183BQ1AE95 376 aa15.65■□□□□ 0.1
U2AF1-202ENST00000380276 TMEM183AQ8IXX5 376 aa15.65■□□□□ 0.1
U2AF1-202ENST00000380276 NAGKQ9UJ70 344 aa15.65■□□□□ 0.1
U2AF1-202ENST00000380276 OR7C2O60412 319 aa15.64■□□□□ 0.09
U2AF1-202ENST00000380276 ORM1P02763 201 aa15.64■□□□□ 0.09
U2AF1-202ENST00000380276 CRYGDP07320 174 aa15.64■□□□□ 0.09
U2AF1-202ENST00000380276 NHLH2Q02577 135 aa15.64■□□□□ 0.09
U2AF1-202ENST00000380276 FAM159AQ6UWV7 190 aa15.64■□□□□ 0.09
U2AF1-202ENST00000380276 OR5C1Q8NGR4 320 aa15.64■□□□□ 0.09
U2AF1-202ENST00000380276 TXNDC17Q9BRA2 123 aa15.64■□□□□ 0.09
U2AF1-202ENST00000380276 PSCAO43653 123 aa15.63■□□□□ 0.09
U2AF1-202ENST00000380276 RANP62826 216 aaKnown RBP15.63■□□□□ 0.09
U2AF1-202ENST00000380276 OR10G4Q8NGN3 311 aa15.63■□□□□ 0.09
U2AF1-202ENST00000380276 FXYD5Q96DB9 178 aa15.63■□□□□ 0.09
U2AF1-202ENST00000380276 TRGV11A0A075B6L2 103 aa15.62■□□□□ 0.09
U2AF1-202ENST00000380276 C9JCJ5 164 aa15.62■□□□□ 0.09
U2AF1-202ENST00000380276 IL15RAQ13261 267 aa15.62■□□□□ 0.09
U2AF1-202ENST00000380276 ZNF266Q14584 549 aa15.62■□□□□ 0.09
U2AF1-202ENST00000380276 SPXQ9BT56 116 aa15.62■□□□□ 0.09
U2AF1-202ENST00000380276 KCNIP2Q9NS61 270 aa15.62■□□□□ 0.09
U2AF1-202ENST00000380276 FAT1Q14517 4588 aa15.62■□□□□ 0.09
U2AF1-202ENST00000380276 TRBV7-9A0A0J9YWB2 115 aa15.61■□□□□ 0.09
U2AF1-202ENST00000380276 K7EP13 123 aa15.61■□□□□ 0.09
U2AF1-202ENST00000380276 IQCF2Q8IXL9 164 aa15.61■□□□□ 0.09
U2AF1-202ENST00000380276 C10orf126Q8N4M7 172 aa15.61■□□□□ 0.09
U2AF1-202ENST00000380276 IGLV5-52A0A0A0MRZ9 124 aa15.6■□□□□ 0.09
U2AF1-202ENST00000380276 FAM229AH3BQW9 127 aa15.6■□□□□ 0.09
U2AF1-202ENST00000380276 UBE2L3P68036 154 aaKnown RBP15.6■□□□□ 0.09
U2AF1-202ENST00000380276 NHLRC2Q8NBF2 726 aa15.6■□□□□ 0.09
U2AF1-202ENST00000380276 OR4C5Q8NGB2 326 aa15.6■□□□□ 0.09
U2AF1-202ENST00000380276 RPH3ALQ9UNE2 315 aa15.6■□□□□ 0.09
U2AF1-202ENST00000380276 LOC100131303A0A0U1RQF7 123 aa15.59■□□□□ 0.09
U2AF1-202ENST00000380276 FAM240BA0A1B0GVZ2 78 aa15.59■□□□□ 0.09
U2AF1-202ENST00000380276 RBAKDNA6NC62 111 aa15.59■□□□□ 0.09
U2AF1-202ENST00000380276 C17orf112F2Z3M2 114 aa15.59■□□□□ 0.09
U2AF1-202ENST00000380276 PPT1P50897 306 aa15.59■□□□□ 0.09
U2AF1-202ENST00000380276 LRRC37A5PQ49AS3 106 aa15.59■□□□□ 0.09
U2AF1-202ENST00000380276 RASL10AQ92737 203 aa15.59■□□□□ 0.09
U2AF1-202ENST00000380276 HYLS1Q96M11 299 aa15.59■□□□□ 0.09
U2AF1-202ENST00000380276 TRAV4A0A0B4J268 109 aa15.58■□□□□ 0.08
U2AF1-202ENST00000380276 WDR61Q9GZS3 305 aaKnown RBP15.58■□□□□ 0.08
U2AF1-202ENST00000380276 SIX6O95475 246 aa15.57■□□□□ 0.08
U2AF1-202ENST00000380276 Q6AWC8 147 aa15.57■□□□□ 0.08
U2AF1-202ENST00000380276 IGHV3-16A0A0C4DH30 117 aa15.56■□□□□ 0.08
U2AF1-202ENST00000380276 DIRC3C9JPN6 131 aa15.56■□□□□ 0.08
U2AF1-202ENST00000380276 OR5AC2Q9NZP5 309 aa15.56■□□□□ 0.08
U2AF1-202ENST00000380276 Q6ZSN1 163 aa15.55■□□□□ 0.08
U2AF1-202ENST00000380276 Q9HAA7 133 aa15.55■□□□□ 0.08
U2AF1-202ENST00000380276 DMBT1Q9UGM3 2413 aaPredicted RBP15.55■□□□□ 0.08
U2AF1-202ENST00000380276 IGHV3-38A0A0C4DH36 116 aa15.54■□□□□ 0.08
U2AF1-202ENST00000380276 M0R2P5 195 aa15.54■□□□□ 0.08
U2AF1-202ENST00000380276 GNRH2O43555 120 aa15.54■□□□□ 0.08
U2AF1-202ENST00000380276 KHDC3LQ587J8 217 aa15.54■□□□□ 0.08
U2AF1-202ENST00000380276 FFAR4Q5NUL3 377 aa15.54■□□□□ 0.08
U2AF1-202ENST00000380276 MZT2BQ6NZ67 158 aa15.54■□□□□ 0.08
U2AF1-202ENST00000380276 CMTM2Q8TAZ6 248 aa15.54■□□□□ 0.08
U2AF1-202ENST00000380276 LENEPQ9Y5L5 61 aa15.54■□□□□ 0.08
U2AF1-202ENST00000380276 SH2D6Q7Z4S9 175 aa15.53■□□□□ 0.08
U2AF1-202ENST00000380276 F6UZH7 168 aa15.52■□□□□ 0.08
U2AF1-202ENST00000380276 EIF3GO75821 320 aaKnown RBP eCLIP15.52■□□□□ 0.08
U2AF1-202ENST00000380276 TAS2R45P59539 299 aa15.52■□□□□ 0.08
U2AF1-202ENST00000380276 CCDC32Q9BV29 185 aa15.52■□□□□ 0.08
U2AF1-202ENST00000380276 VPS13BQ7Z7G8 4022 aa15.52■□□□□ 0.07
U2AF1-202ENST00000380276 TRAV8-6A0A0B4J262 113 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms