RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 DTX2Q86UW9 622 aa8.93□□□□□ -0.98
SMAD9-202ENST00000379826 DYNAPQ8N1N2 210 aa8.93□□□□□ -0.98
SMAD9-202ENST00000379826 BPESC1Q9GZL8 116 aa8.93□□□□□ -0.98
SMAD9-202ENST00000379826 ZNF256Q9Y2P7 627 aaPredicted RBP8.93□□□□□ -0.98
SMAD9-202ENST00000379826 CFHR4Q92496 578 aa8.93□□□□□ -0.98
SMAD9-202ENST00000379826 PTPRQQ9UMZ3 2332 aa8.92□□□□□ -0.98
SMAD9-202ENST00000379826 RBX1P62877 108 aa8.92□□□□□ -0.98
SMAD9-202ENST00000379826 FAM159AQ6UWV7 190 aa8.92□□□□□ -0.98
SMAD9-202ENST00000379826 TECTAO75443 2155 aa8.92□□□□□ -0.98
SMAD9-202ENST00000379826 MSMBP08118 114 aa8.92□□□□□ -0.98
SMAD9-202ENST00000379826 G3V318 75 aa8.92□□□□□ -0.98
SMAD9-202ENST00000379826 MLST8Q9BVC4 326 aa8.92□□□□□ -0.98
SMAD9-202ENST00000379826 MRPL35Q9NZE8 188 aaKnown RBP8.92□□□□□ -0.98
SMAD9-202ENST00000379826 TRANK1O15050 2925 aa8.92□□□□□ -0.98
SMAD9-202ENST00000379826 GRNP28799 593 aaKnown RBP8.91□□□□□ -0.98
SMAD9-202ENST00000379826 C8orf31Q8N9H6 132 aa8.91□□□□□ -0.98
SMAD9-202ENST00000379826 URB1-AS1Q96HZ7 61 aa8.91□□□□□ -0.98
SMAD9-202ENST00000379826 PEMTQ9UBM1 199 aa8.91□□□□□ -0.98
SMAD9-202ENST00000379826 SMPXQ9UHP9 88 aa8.91□□□□□ -0.98
SMAD9-202ENST00000379826 POLEQ07864 2286 aa8.91□□□□□ -0.98
SMAD9-202ENST00000379826 ATP6V0E1O15342 81 aa8.91□□□□□ -0.98
SMAD9-202ENST00000379826 KIR2DL4Q99706 377 aa8.91□□□□□ -0.98
SMAD9-202ENST00000379826 ARFGEF3Q5TH69 2177 aa8.91□□□□□ -0.98
SMAD9-202ENST00000379826 PKDREJQ9NTG1 2253 aa8.91□□□□□ -0.98
SMAD9-202ENST00000379826 GATA3P23771 443 aa8.91□□□□□ -0.98
SMAD9-202ENST00000379826 ZNF562Q6V9R5 426 aa8.91□□□□□ -0.98
SMAD9-202ENST00000379826 CEP250Q9BV73 2442 aa8.91□□□□□ -0.98
SMAD9-202ENST00000379826 TANC2Q9HCD6 1990 aa8.91□□□□□ -0.98
SMAD9-202ENST00000379826 INS-IGF2F8WCM5 200 aa8.91□□□□□ -0.98
SMAD9-202ENST00000379826 MYCNOSP40205 109 aa8.91□□□□□ -0.98
SMAD9-202ENST00000379826 NEGR1Q7Z3B1 354 aa8.91□□□□□ -0.98
SMAD9-202ENST00000379826 Q8N8P6 123 aa8.91□□□□□ -0.98
SMAD9-202ENST00000379826 CEND1Q8N111 149 aa8.9□□□□□ -0.98
SMAD9-202ENST00000379826 PAX8Q06710 450 aa8.9□□□□□ -0.98
SMAD9-202ENST00000379826 AMTNQ6UX39 209 aa8.9□□□□□ -0.98
SMAD9-202ENST00000379826 NRGNQ92686 78 aa8.9□□□□□ -0.98
SMAD9-202ENST00000379826 SRSF8Q9BRL6 282 aaKnown RBP8.9□□□□□ -0.98
SMAD9-202ENST00000379826 PIEZO1Q92508 2521 aa8.9□□□□□ -0.99
SMAD9-202ENST00000379826 ORMDL2Q53FV1 153 aa8.9□□□□□ -0.99
SMAD9-202ENST00000379826 PGPEP1Q9NXJ5 209 aa8.9□□□□□ -0.99
SMAD9-202ENST00000379826 KAAG1Q9UBP8 84 aa8.9□□□□□ -0.99
SMAD9-202ENST00000379826 TSSC4Q9Y5U2 329 aaPredicted RBP8.9□□□□□ -0.99
SMAD9-202ENST00000379826 H7C1H1 209 aa8.89□□□□□ -0.99
SMAD9-202ENST00000379826 CRYGCP07315 174 aa8.89□□□□□ -0.99
SMAD9-202ENST00000379826 CD7P09564 240 aa8.89□□□□□ -0.99
SMAD9-202ENST00000379826 RAX2Q96IS3 184 aa8.89□□□□□ -0.99
SMAD9-202ENST00000379826 LINC00574Q9H8X3 128 aa8.89□□□□□ -0.99
SMAD9-202ENST00000379826 PCSK5Q92824 1860 aa8.89□□□□□ -0.99
SMAD9-202ENST00000379826 A0A1B0GV72 72 aa8.89□□□□□ -0.99
SMAD9-202ENST00000379826 PLNP26678 52 aa8.89□□□□□ -0.99
SMAD9-202ENST00000379826 TRAV21A0A0B4J279 112 aa8.89□□□□□ -0.99
SMAD9-202ENST00000379826 PRAC2D3DTV9 90 aa8.89□□□□□ -0.99
SMAD9-202ENST00000379826 H3BMG7 143 aa8.89□□□□□ -0.99
SMAD9-202ENST00000379826 CSTL1Q9H114 145 aa8.89□□□□□ -0.99
SMAD9-202ENST00000379826 PRSS2P07478 247 aa8.88□□□□□ -0.99
SMAD9-202ENST00000379826 M0R1W7 72 aa8.88□□□□□ -0.99
SMAD9-202ENST00000379826 BRD3OSQ6XYD6 125 aa8.88□□□□□ -0.99
SMAD9-202ENST00000379826 SYT8Q8NBV8 401 aa8.88□□□□□ -0.99
SMAD9-202ENST00000379826 FXYD2P54710 66 aa8.88□□□□□ -0.99
SMAD9-202ENST00000379826 FOXE3Q13461 319 aa8.88□□□□□ -0.99
SMAD9-202ENST00000379826 TET2Q6N021 2002 aaPredicted RBP8.88□□□□□ -0.99
SMAD9-202ENST00000379826 PRUNE2Q8WUY3 3088 aa8.88□□□□□ -0.99
SMAD9-202ENST00000379826 CRIP1P50238 77 aa8.88□□□□□ -0.99
SMAD9-202ENST00000379826 RAI1Q7Z5J4 1906 aaPredicted RBP8.88□□□□□ -0.99
SMAD9-202ENST00000379826 A0A087WWL8 130 aa8.88□□□□□ -0.99
SMAD9-202ENST00000379826 IGLV2-11P01706 119 aa8.88□□□□□ -0.99
SMAD9-202ENST00000379826 ITLN2Q8WWU7 325 aaPredicted RBP8.88□□□□□ -0.99
SMAD9-202ENST00000379826 IGHV4-39P01824 125 aa8.87□□□□□ -0.99
SMAD9-202ENST00000379826 C8orf86Q6ZUL3 223 aa8.87□□□□□ -0.99
SMAD9-202ENST00000379826 TRAV41A0A0B4J266 112 aa8.87□□□□□ -0.99
SMAD9-202ENST00000379826 WI2-2373I1.2A0A1W2PRP0 233 aa8.87□□□□□ -0.99
SMAD9-202ENST00000379826 ZNF80P51504 273 aaPredicted RBP8.87□□□□□ -0.99
SMAD9-202ENST00000379826 PRTN3P24158 256 aa8.87□□□□□ -0.99
SMAD9-202ENST00000379826 CEACAM4O75871 244 aa8.87□□□□□ -0.99
SMAD9-202ENST00000379826 SAA4P35542 130 aa8.87□□□□□ -0.99
SMAD9-202ENST00000379826 TRAV2A0A0B4J234 112 aa8.86□□□□□ -0.99
SMAD9-202ENST00000379826 SIVA1O15304 175 aa8.86□□□□□ -0.99
SMAD9-202ENST00000379826 PSMG4Q5JS54 123 aa8.86□□□□□ -0.99
SMAD9-202ENST00000379826 LAMA1P25391 3075 aa8.86□□□□□ -0.99
SMAD9-202ENST00000379826 CRXO43186 299 aaPredicted RBP8.86□□□□□ -0.99
SMAD9-202ENST00000379826 ETDBQ3ZM63 59 aa8.86□□□□□ -0.99
SMAD9-202ENST00000379826 INAFM1C9JVW0 142 aa8.86□□□□□ -0.99
SMAD9-202ENST00000379826 J3QLI3 93 aa8.86□□□□□ -0.99
SMAD9-202ENST00000379826 IGLV1-47P01700 117 aa8.86□□□□□ -0.99
SMAD9-202ENST00000379826 NPC2P61916 151 aa8.86□□□□□ -0.99
SMAD9-202ENST00000379826 BOD1L2Q8IYS8 172 aa8.86□□□□□ -0.99
SMAD9-202ENST00000379826 CUL9Q8IWT3 2517 aa8.85□□□□□ -0.99
SMAD9-202ENST00000379826 TNCP24821 2201 aa8.85□□□□□ -0.99
SMAD9-202ENST00000379826 TRBV25-1A0A075B6N4 114 aa8.85□□□□□ -0.99
SMAD9-202ENST00000379826 IGHV3-73A0A0B4J1V6 119 aa8.85□□□□□ -0.99
SMAD9-202ENST00000379826 MYMXA0A1B0GTQ4 84 aa8.85□□□□□ -0.99
SMAD9-202ENST00000379826 TEX48A0A1B0GUV7 120 aa8.85□□□□□ -0.99
SMAD9-202ENST00000379826 AZU1P20160 251 aa8.85□□□□□ -0.99
SMAD9-202ENST00000379826 TMEM190Q8WZ59 177 aa8.85□□□□□ -0.99
SMAD9-202ENST00000379826 IGLV11-55A0A075B6I3 123 aa8.85□□□□□ -0.99
SMAD9-202ENST00000379826 TRAV12-3A0A0B4J271 114 aa8.85□□□□□ -0.99
SMAD9-202ENST00000379826 AGPAT4-IT1Q9H0P7 198 aa8.85□□□□□ -0.99
SMAD9-202ENST00000379826 C2orf91Q6ZV80 131 aa8.84□□□□□ -0.99
SMAD9-202ENST00000379826 SH2D6Q7Z4S9 175 aa8.84□□□□□ -0.99
SMAD9-202ENST00000379826 HOXB4P17483 251 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms