RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 IGHV4-31P0DP07 118 aa8.01□□□□□ -1.13
POLR2J3-201ENST00000379340 SAMD13Q5VXD3 122 aa8.01□□□□□ -1.13
POLR2J3-201ENST00000379340 RNASEKQ6P5S7 137 aaKnown RBP8.01□□□□□ -1.13
POLR2J3-201ENST00000379340 LYZL1Q6UWQ5 148 aa8.01□□□□□ -1.13
POLR2J3-201ENST00000379340 PRSS57Q6UWY2 283 aa8.01□□□□□ -1.13
POLR2J3-201ENST00000379340 REC114Q7Z4M0 266 aa8.01□□□□□ -1.13
POLR2J3-201ENST00000379340 RNF182Q8N6D2 247 aa8.01□□□□□ -1.13
POLR2J3-201ENST00000379340 FER1L6-AS1Q8NA97 138 aa8.01□□□□□ -1.13
POLR2J3-201ENST00000379340 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8□□□□□ -1.137e-8■■■□□ 16.4
POLR2J3-201ENST00000379340 IGHV3OR16-13A0A075B7E8 117 aa8□□□□□ -1.13
POLR2J3-201ENST00000379340 IGHV3-74A0A0B4J1X5 117 aa8□□□□□ -1.13
POLR2J3-201ENST00000379340 PRAC2D3DTV9 90 aa8□□□□□ -1.13
POLR2J3-201ENST00000379340 RNF223E7ERA6 249 aa8□□□□□ -1.13
POLR2J3-201ENST00000379340 OVOL1O14753 267 aa8□□□□□ -1.13
POLR2J3-201ENST00000379340 IGHV4-59P01825 116 aa8□□□□□ -1.13
POLR2J3-201ENST00000379340 NTF3P20783 257 aa8□□□□□ -1.13
POLR2J3-201ENST00000379340 ZNF80P51504 273 aaPredicted RBP8□□□□□ -1.13
POLR2J3-201ENST00000379340 KRTDAPP60985 99 aa8□□□□□ -1.13
POLR2J3-201ENST00000379340 ERCC8Q13216 396 aa8□□□□□ -1.13
POLR2J3-201ENST00000379340 FAM106AQ4KMX7 169 aa8□□□□□ -1.13
POLR2J3-201ENST00000379340 AGPAT4-IT1Q9H0P7 198 aa8□□□□□ -1.13
POLR2J3-201ENST00000379340 KLK15Q9H2R5 256 aa8□□□□□ -1.13
POLR2J3-201ENST00000379340 PEF1Q9UBV8 284 aaKnown RBP8□□□□□ -1.13
POLR2J3-201ENST00000379340 VPREB3Q9UKI3 123 aa8□□□□□ -1.13
POLR2J3-201ENST00000379340 CUBNO60494 3623 aa7.99□□□□□ -1.13
POLR2J3-201ENST00000379340 IGHV3-49A0A0A0MS15 119 aa7.99□□□□□ -1.13
POLR2J3-201ENST00000379340 IGHV7-4-1A0A0J9YVY3 117 aa7.99□□□□□ -1.13
POLR2J3-201ENST00000379340 CRLF1O75462 422 aa7.99□□□□□ -1.13
POLR2J3-201ENST00000379340 TRBV12-3P01733 135 aa7.99□□□□□ -1.13
POLR2J3-201ENST00000379340 IGHV3-11P01762 117 aa7.99□□□□□ -1.13
POLR2J3-201ENST00000379340 OR5AL1P0C617 328 aa7.99□□□□□ -1.13
POLR2J3-201ENST00000379340 PSMB8P28062 276 aa7.99□□□□□ -1.13
POLR2J3-201ENST00000379340 KRTAP1-1Q07627 177 aa7.99□□□□□ -1.13
POLR2J3-201ENST00000379340 UNQ9165/PRO28630Q6UXU0 137 aa7.99□□□□□ -1.13
POLR2J3-201ENST00000379340 Q6YL49 198 aa7.99□□□□□ -1.13
POLR2J3-201ENST00000379340 Q6ZS46 218 aa7.99□□□□□ -1.13
POLR2J3-201ENST00000379340 GPHB5Q86YW7 130 aa7.99□□□□□ -1.13
POLR2J3-201ENST00000379340 TEX29Q8N6K0 151 aa7.99□□□□□ -1.13
POLR2J3-201ENST00000379340 C20orf144Q9BQM9 153 aa7.99□□□□□ -1.13
POLR2J3-201ENST00000379340 TPPP3Q9BW30 176 aa7.99□□□□□ -1.13
POLR2J3-201ENST00000379340 CNFNQ9BYD5 112 aa7.99□□□□□ -1.13
POLR2J3-201ENST00000379340 DAZ1Q9NQZ3 744 aaKnown RBP7.99□□□□□ -1.13
POLR2J3-201ENST00000379340 TMSB15BA0A087X1C1 80 aa7.98□□□□□ -1.13
POLR2J3-201ENST00000379340 FAM181BA6NEQ2 426 aa7.98□□□□□ -1.13
POLR2J3-201ENST00000379340 SOCS3O14543 225 aa7.98□□□□□ -1.13
POLR2J3-201ENST00000379340 ORM1P02763 201 aa7.98□□□□□ -1.13
POLR2J3-201ENST00000379340 LINC00614P0C842 121 aa7.98□□□□□ -1.13
POLR2J3-201ENST00000379340 C3orf79P0CE67 100 aa7.98□□□□□ -1.13
POLR2J3-201ENST00000379340 PMCHL1Q16048 86 aa7.98□□□□□ -1.13
POLR2J3-201ENST00000379340 FAM104BQ5XKR9 115 aa7.98□□□□□ -1.13
POLR2J3-201ENST00000379340 IL17RELQ6ZVW7 336 aa7.98□□□□□ -1.13
POLR2J3-201ENST00000379340 FAM19A2Q8N3H0 131 aa7.98□□□□□ -1.13
POLR2J3-201ENST00000379340 ZNF738Q8NE65 137 aa7.98□□□□□ -1.13
POLR2J3-201ENST00000379340 URB1-AS1Q96HZ7 61 aa7.98□□□□□ -1.13
POLR2J3-201ENST00000379340 LINC00477Q96M19 166 aa7.98□□□□□ -1.13
POLR2J3-201ENST00000379340 NDUFAF3Q9BU61 184 aa7.98□□□□□ -1.13
POLR2J3-201ENST00000379340 VAMP8Q9BV40 100 aa7.98□□□□□ -1.13
POLR2J3-201ENST00000379340 UFC1Q9Y3C8 167 aa7.98□□□□□ -1.13
POLR2J3-201ENST00000379340 U3KQK5 164 aa7.98□□□□□ -1.13
POLR2J3-201ENST00000379340 ANK3Q12955 4377 aaKnown RBP7.98□□□□□ -1.13
POLR2J3-201ENST00000379340 TRBV7-9A0A0J9YWB2 115 aa7.97□□□□□ -1.13
POLR2J3-201ENST00000379340 ELANEP08246 267 aa7.97□□□□□ -1.13
POLR2J3-201ENST00000379340 PRB4P10163 310 aaPredicted RBP7.97□□□□□ -1.13
POLR2J3-201ENST00000379340 BTF3P20290 206 aaKnown RBP7.97□□□□□ -1.13
POLR2J3-201ENST00000379340 FOXE3Q13461 319 aa7.97□□□□□ -1.13
POLR2J3-201ENST00000379340 Q8N976 141 aa7.97□□□□□ -1.13
POLR2J3-201ENST00000379340 OR10J6PQ8NGY7 276 aa7.97□□□□□ -1.13
POLR2J3-201ENST00000379340 C14orf144Q96I85 54 aa7.97□□□□□ -1.13
POLR2J3-201ENST00000379340 TMEM191AQ9H0A3 160 aa7.97□□□□□ -1.13
POLR2J3-201ENST00000379340 CR1P17927 2039 aa7.97□□□□□ -1.13
POLR2J3-201ENST00000379340 WIPF1O43516 503 aa7.97□□□□□ -1.13
POLR2J3-201ENST00000379340 LBHQ53QV2 105 aaPredicted RBP7.97□□□□□ -1.13
POLR2J3-201ENST00000379340 RHPN1-AS1Q9BWJ2 59 aa7.97□□□□□ -1.13
POLR2J3-201ENST00000379340 SMPXQ9UHP9 88 aa7.97□□□□□ -1.13
POLR2J3-201ENST00000379340 RNF114Q9Y508 228 aa7.97□□□□□ -1.13
POLR2J3-201ENST00000379340 CD33P20138 364 aa7.96□□□□□ -1.14
POLR2J3-201ENST00000379340 ID1P41134 155 aa7.96□□□□□ -1.14
POLR2J3-201ENST00000379340 MRPL52Q86TS9 123 aaKnown RBP7.96□□□□□ -1.14
POLR2J3-201ENST00000379340 ORMDL3Q8N138 153 aa7.96□□□□□ -1.14
POLR2J3-201ENST00000379340 LAMTOR2Q9Y2Q5 125 aa7.96□□□□□ -1.14
POLR2J3-201ENST00000379340 IGHV1-24A0A0C4DH33 117 aa7.95□□□□□ -1.14
POLR2J3-201ENST00000379340 C20orf202A1L168 122 aa7.95□□□□□ -1.14
POLR2J3-201ENST00000379340 TMEM213A2RRL7 107 aa7.95□□□□□ -1.14
POLR2J3-201ENST00000379340 C2orf70A6NJV1 201 aa7.95□□□□□ -1.14
POLR2J3-201ENST00000379340 PPBPP02775 128 aa7.95□□□□□ -1.14
POLR2J3-201ENST00000379340 TWIST1Q15672 202 aa7.95□□□□□ -1.14
POLR2J3-201ENST00000379340 MAPK1IP1LQ8NDC0 245 aa7.95□□□□□ -1.14
POLR2J3-201ENST00000379340 MYOZ3Q8TDC0 251 aa7.95□□□□□ -1.14
POLR2J3-201ENST00000379340 C20orf173Q96LM9 149 aa7.95□□□□□ -1.14
POLR2J3-201ENST00000379340 PRELID3AQ96N28 172 aa7.95□□□□□ -1.14
POLR2J3-201ENST00000379340 TMEM70Q9BUB7 260 aa7.95□□□□□ -1.14
POLR2J3-201ENST00000379340 D6R8Y8 96 aa7.94□□□□□ -1.14
POLR2J3-201ENST00000379340 CRXO43186 299 aaPredicted RBP7.94□□□□□ -1.14
POLR2J3-201ENST00000379340 LEPROTL1O95214 131 aa7.94□□□□□ -1.14
POLR2J3-201ENST00000379340 LGALS1P09382 135 aaKnown RBP7.94□□□□□ -1.14
POLR2J3-201ENST00000379340 CACNG7P62955 275 aa7.94□□□□□ -1.14
POLR2J3-201ENST00000379340 TMEM95Q3KNT9 176 aa7.94□□□□□ -1.14
POLR2J3-201ENST00000379340 EBLN2Q6P2I7 272 aa7.94□□□□□ -1.14
POLR2J3-201ENST00000379340 FA2HQ7L5A8 372 aa7.94□□□□□ -1.14
POLR2J3-201ENST00000379340 RNF152Q8N8N0 203 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms