RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 LGALS9BQ3B8N2 356 aa14.98□□□□□ -0.01
SHROOM1-202ENST00000378676 LGALS9CQ6DKI2 356 aa14.98□□□□□ -0.01
SHROOM1-202ENST00000378676 C8orf86Q6ZUL3 223 aa14.98□□□□□ -0.01
SHROOM1-202ENST00000378676 WFDC3Q8IUB2 231 aa14.98□□□□□ -0.01
SHROOM1-202ENST00000378676 CHTOPQ9Y3Y2 248 aaKnown RBP14.98□□□□□ -0.01
SHROOM1-202ENST00000378676 CD5LO43866 347 aa14.97□□□□□ -0.01
SHROOM1-202ENST00000378676 FGF6P10767 208 aa14.97□□□□□ -0.01
SHROOM1-202ENST00000378676 TCTAP57738 103 aa14.97□□□□□ -0.01
SHROOM1-202ENST00000378676 METTL26Q96S19 204 aa14.97□□□□□ -0.01
SHROOM1-202ENST00000378676 TRBV7-1A0A0A6YYK4 115 aa14.97□□□□□ -0.01
SHROOM1-202ENST00000378676 AMMECR1LQ6DCA0 310 aa14.97□□□□□ -0.01
SHROOM1-202ENST00000378676 Q6ZQT7 251 aa14.97□□□□□ -0.01
SHROOM1-202ENST00000378676 CELSR1Q9NYQ6 3014 aa14.97□□□□□ -0.01
SHROOM1-202ENST00000378676 GATA1P15976 413 aaPredicted RBP14.96□□□□□ -0.01
SHROOM1-202ENST00000378676 EVI2AP22794 236 aa14.96□□□□□ -0.01
SHROOM1-202ENST00000378676 IFI27L1Q96BM0 104 aa14.96□□□□□ -0.01
SHROOM1-202ENST00000378676 U3KQE9 123 aa14.96□□□□□ -0.01
SHROOM1-202ENST00000378676 IGHV4-39P01824 125 aa14.96□□□□□ -0.02
SHROOM1-202ENST00000378676 MAP1LC3AQ9H492 121 aa14.96□□□□□ -0.02
SHROOM1-202ENST00000378676 C19orf54Q5BKX5 351 aa14.95□□□□□ -0.02
SHROOM1-202ENST00000378676 GAGE12BA1L429 117 aa14.95□□□□□ -0.02
SHROOM1-202ENST00000378676 TMEM238C9JI98 176 aa14.95□□□□□ -0.02
SHROOM1-202ENST00000378676 TRGV3P03979 118 aa14.95□□□□□ -0.02
SHROOM1-202ENST00000378676 ATP5G2Q06055 141 aa14.95□□□□□ -0.02
SHROOM1-202ENST00000378676 SPOCK3Q9BQ16 436 aa14.95□□□□□ -0.02
SHROOM1-202ENST00000378676 MOB4Q9Y3A3 225 aa14.95□□□□□ -0.02
SHROOM1-202ENST00000378676 TRAV41A0A0B4J266 112 aa14.94□□□□□ -0.02
SHROOM1-202ENST00000378676 BRD3OSQ6XYD6 125 aa14.94□□□□□ -0.02
SHROOM1-202ENST00000378676 PIFOQ8TCI5 191 aa14.94□□□□□ -0.02
SHROOM1-202ENST00000378676 VPS13CQ709C8 3753 aa14.94□□□□□ -0.02
SHROOM1-202ENST00000378676 TNFRSF6BO95407 300 aa14.93□□□□□ -0.02
SHROOM1-202ENST00000378676 TMEM78Q5T7P6 136 aa14.93□□□□□ -0.02
SHROOM1-202ENST00000378676 DPF1Q92782 380 aa14.93□□□□□ -0.02
SHROOM1-202ENST00000378676 C18orf15Q96N68 181 aa14.93□□□□□ -0.02
SHROOM1-202ENST00000378676 PEF1Q9UBV8 284 aaKnown RBP14.93□□□□□ -0.02
SHROOM1-202ENST00000378676 GNLYP22749 145 aa14.93□□□□□ -0.02
SHROOM1-202ENST00000378676 IGHV7-4-1A0A0J9YVY3 117 aa14.92□□□□□ -0.02
SHROOM1-202ENST00000378676 LINC01546A6NGU7 62 aa14.92□□□□□ -0.02
SHROOM1-202ENST00000378676 MRPL53Q96EL3 112 aaKnown RBP14.92□□□□□ -0.02
SHROOM1-202ENST00000378676 CIDEAO60543 219 aa14.92□□□□□ -0.02
SHROOM1-202ENST00000378676 DKK2Q9UBU2 259 aa14.92□□□□□ -0.02
SHROOM1-202ENST00000378676 TRAV40A0A0B4J280 105 aa14.91□□□□□ -0.02
SHROOM1-202ENST00000378676 TRBV12-3P01733 135 aa14.91□□□□□ -0.02
SHROOM1-202ENST00000378676 PRR9Q5T870 116 aa14.91□□□□□ -0.02
SHROOM1-202ENST00000378676 C20orf173Q96LM9 149 aa14.91□□□□□ -0.02
SHROOM1-202ENST00000378676 C9orf47Q6ZRZ4 202 aa14.91□□□□□ -0.02
SHROOM1-202ENST00000378676 GLMPQ8WWB7 406 aa14.91□□□□□ -0.02
SHROOM1-202ENST00000378676 IGHV1-69DA0A0B4J2H0 117 aa14.9□□□□□ -0.02
SHROOM1-202ENST00000378676 IGHV1-69P01742 117 aa14.9□□□□□ -0.02
SHROOM1-202ENST00000378676 LEPP41159 167 aa14.9□□□□□ -0.02
SHROOM1-202ENST00000378676 OR1N2Q8NGR9 330 aa14.9□□□□□ -0.02
SHROOM1-202ENST00000378676 NPFFR1Q9GZQ6 430 aa14.9□□□□□ -0.02
SHROOM1-202ENST00000378676 UNQ9165/PRO28630Q6UXU0 137 aa14.9□□□□□ -0.02
SHROOM1-202ENST00000378676 SMAD7O15105 426 aaKnown RBP14.89□□□□□ -0.03
SHROOM1-202ENST00000378676 ARL3P36405 182 aa14.89□□□□□ -0.03
SHROOM1-202ENST00000378676 BOD1L2Q8IYS8 172 aa14.89□□□□□ -0.03
SHROOM1-202ENST00000378676 C16orf92Q96LL3 132 aa14.89□□□□□ -0.03
SHROOM1-202ENST00000378676 MEGF9Q9H1U4 602 aa14.89□□□□□ -0.03
SHROOM1-202ENST00000378676 SPTAN1Q13813 2472 aaKnown RBP14.89□□□□□ -0.03
SHROOM1-202ENST00000378676 IGHV4-61A0A0C4DH41 118 aa14.89□□□□□ -0.03
SHROOM1-202ENST00000378676 FAM223BA6NKX1 122 aa14.89□□□□□ -0.03
SHROOM1-202ENST00000378676 CRIP2P52943 208 aaPredicted RBP14.89□□□□□ -0.03
SHROOM1-202ENST00000378676 FAM223AQ8IWN6 122 aa14.89□□□□□ -0.03
SHROOM1-202ENST00000378676 TRAV8-6A0A0B4J262 113 aa14.88□□□□□ -0.03
SHROOM1-202ENST00000378676 IGF1P05019 195 aa14.88□□□□□ -0.03
SHROOM1-202ENST00000378676 FCER1GP30273 86 aa14.88□□□□□ -0.03
SHROOM1-202ENST00000378676 TMEM97Q5BJF2 176 aa14.88□□□□□ -0.03
SHROOM1-202ENST00000378676 GPHB5Q86YW7 130 aa14.88□□□□□ -0.03
SHROOM1-202ENST00000378676 NXT2Q9NPJ8 142 aaKnown RBP14.88□□□□□ -0.03
SHROOM1-202ENST00000378676 HIF1ANQ9NWT6 349 aa14.88□□□□□ -0.03
SHROOM1-202ENST00000378676 IGLV2-18A0A075B6J9 118 aa14.88□□□□□ -0.03
SHROOM1-202ENST00000378676 TRAV26-2A0A0B4J265 109 aa14.88□□□□□ -0.03
SHROOM1-202ENST00000378676 IGHV4-38-2P0DP08 117 aa14.87□□□□□ -0.03
SHROOM1-202ENST00000378676 DEFB1P60022 68 aa14.87□□□□□ -0.03
SHROOM1-202ENST00000378676 SEC11AP67812 179 aa14.87□□□□□ -0.03
SHROOM1-202ENST00000378676 LY6EQ16553 131 aa14.87□□□□□ -0.03
SHROOM1-202ENST00000378676 PCP2Q8IVA1 136 aa14.87□□□□□ -0.03
SHROOM1-202ENST00000378676 UFC1Q9Y3C8 167 aa14.87□□□□□ -0.03
SHROOM1-202ENST00000378676 IGSF10Q6WRI0 2623 aa14.86□□□□□ -0.03
SHROOM1-202ENST00000378676 C9orf139Q6ZV77 190 aa14.86□□□□□ -0.03
SHROOM1-202ENST00000378676 OR2K2Q8NGT1 345 aa14.86□□□□□ -0.03
SHROOM1-202ENST00000378676 TMEM158Q8WZ71 300 aa14.86□□□□□ -0.03
SHROOM1-202ENST00000378676 H3BVH4 76 aa14.85□□□□□ -0.03
SHROOM1-202ENST00000378676 J3KRW8 73 aa14.85□□□□□ -0.03
SHROOM1-202ENST00000378676 ODF1Q14990 250 aa14.85□□□□□ -0.03
SHROOM1-202ENST00000378676 Q8N8P6 123 aa14.85□□□□□ -0.03
SHROOM1-202ENST00000378676 NRACQ8N912 160 aa14.85□□□□□ -0.03
SHROOM1-202ENST00000378676 NMUP48645 174 aa14.85□□□□□ -0.03
SHROOM1-202ENST00000378676 ATP6V0BQ99437 205 aa14.85□□□□□ -0.03
SHROOM1-202ENST00000378676 USP24Q9UPU5 2620 aa14.84□□□□□ -0.03
SHROOM1-202ENST00000378676 GAGE10A6NGK3 116 aa14.84□□□□□ -0.03
SHROOM1-202ENST00000378676 UFSP1Q6NVU6 142 aa14.84□□□□□ -0.03
SHROOM1-202ENST00000378676 GTF2H5Q6ZYL4 71 aa14.84□□□□□ -0.03
SHROOM1-202ENST00000378676 C7orf71A4D174 169 aa14.84□□□□□ -0.03
SHROOM1-202ENST00000378676 IGHV3-11P01762 117 aa14.84□□□□□ -0.03
SHROOM1-202ENST00000378676 PIMREGQ9BSJ6 248 aa14.83□□□□□ -0.03
SHROOM1-202ENST00000378676 G3V4G9 280 aa14.83□□□□□ -0.04
SHROOM1-202ENST00000378676 SOCS3O14543 225 aa14.83□□□□□ -0.04
SHROOM1-202ENST00000378676 SPANXN1Q5VSR9 72 aa14.83□□□□□ -0.04
SHROOM1-202ENST00000378676 ZMAT4Q9H898 229 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms