RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 RIPPLY3P57055 190 aa10.4□□□□□ -0.75
NPHP4-203ENST00000378169 BLCAPP62952 87 aa10.4□□□□□ -0.75
NPHP4-203ENST00000378169 LAGE3Q14657 143 aa10.4□□□□□ -0.75
NPHP4-203ENST00000378169 SPINK13Q1W4C9 94 aa10.4□□□□□ -0.75
NPHP4-203ENST00000378169 ZNF876PQ49A33 203 aa10.4□□□□□ -0.75
NPHP4-203ENST00000378169 C1orf122Q6ZSJ8 110 aa10.4□□□□□ -0.75
NPHP4-203ENST00000378169 FAM231DQ6ZW35 169 aa10.4□□□□□ -0.75
NPHP4-203ENST00000378169 CENPVL3A0A0U1RRI6 287 aa10.39□□□□□ -0.75
NPHP4-203ENST00000378169 IGHV4-38-2P0DP08 117 aa10.39□□□□□ -0.75
NPHP4-203ENST00000378169 MRAP2Q96G30 205 aa10.39□□□□□ -0.75
NPHP4-203ENST00000378169 TMEM14CQ9P0S9 112 aa10.39□□□□□ -0.75
NPHP4-203ENST00000378169 PRSS57Q6UWY2 283 aa10.39□□□□□ -0.75
NPHP4-203ENST00000378169 Q6ZWC4 215 aa10.39□□□□□ -0.75
NPHP4-203ENST00000378169 Q8N7P7 452 aa10.39□□□□□ -0.75
NPHP4-203ENST00000378169 RCHY1Q96PM5 261 aa10.39□□□□□ -0.75
NPHP4-203ENST00000378169 MRPL16Q9NX20 251 aaKnown RBP10.39□□□□□ -0.75
NPHP4-203ENST00000378169 POLR3KQ9Y2Y1 108 aaPredicted RBP10.39□□□□□ -0.75
NPHP4-203ENST00000378169 HCFC1P51610 2035 aa10.39□□□□□ -0.75
NPHP4-203ENST00000378169 KIAA1549Q9HCM3 1950 aa10.39□□□□□ -0.75
NPHP4-203ENST00000378169 IGHV4-59P01825 116 aa10.39□□□□□ -0.75
NPHP4-203ENST00000378169 IGKCP01834 107 aa10.39□□□□□ -0.75
NPHP4-203ENST00000378169 GATA3P23771 443 aa10.39□□□□□ -0.75
NPHP4-203ENST00000378169 GFRA4Q9GZZ7 299 aa10.39□□□□□ -0.75
NPHP4-203ENST00000378169 DPH3P1Q9H4G8 78 aa10.39□□□□□ -0.75
NPHP4-203ENST00000378169 A0A087X0K7 114 aa10.38□□□□□ -0.75
NPHP4-203ENST00000378169 CDPF1Q6NVV7 123 aa10.38□□□□□ -0.75
NPHP4-203ENST00000378169 ALKBH7Q9BT30 221 aaPredicted RBP10.38□□□□□ -0.75
NPHP4-203ENST00000378169 F6UB75 175 aa10.38□□□□□ -0.75
NPHP4-203ENST00000378169 I3L2K1 104 aa10.38□□□□□ -0.75
NPHP4-203ENST00000378169 NDUFS6O75380 124 aaKnown RBP10.38□□□□□ -0.75
NPHP4-203ENST00000378169 IGHV3-53P01767 116 aa10.38□□□□□ -0.75
NPHP4-203ENST00000378169 COX6CP09669 75 aa10.38□□□□□ -0.75
NPHP4-203ENST00000378169 CT83Q5H943 113 aa10.38□□□□□ -0.75
NPHP4-203ENST00000378169 TRGV11A0A075B6L2 103 aa10.38□□□□□ -0.75
NPHP4-203ENST00000378169 SMIM27A0A1W2PRY6 76 aa10.38□□□□□ -0.75
NPHP4-203ENST00000378169 KNCNA6PVL3 124 aa10.38□□□□□ -0.75
NPHP4-203ENST00000378169 TNFRSF6BO95407 300 aa10.38□□□□□ -0.75
NPHP4-203ENST00000378169 P0C879 139 aa10.38□□□□□ -0.75
NPHP4-203ENST00000378169 CIRBPQ14011 172 aaKnown RBP10.38□□□□□ -0.75
NPHP4-203ENST00000378169 MPV17L2Q567V2 206 aa10.38□□□□□ -0.75
NPHP4-203ENST00000378169 STPG4Q8N801 248 aa10.38□□□□□ -0.75
NPHP4-203ENST00000378169 A0A0U1RRA0 63 aa10.38□□□□□ -0.75
NPHP4-203ENST00000378169 ZC2HC1BQ5TFG8 222 aa10.38□□□□□ -0.75
NPHP4-203ENST00000378169 REV3LO60673 3130 aa10.37□□□□□ -0.75
NPHP4-203ENST00000378169 TRAV12-2A0A075B6T6 113 aa10.37□□□□□ -0.75
NPHP4-203ENST00000378169 FAM231BA6NCW3 169 aa10.37□□□□□ -0.75
NPHP4-203ENST00000378169 IGLV2-23P01705 113 aa10.37□□□□□ -0.75
NPHP4-203ENST00000378169 FAM104BQ5XKR9 115 aa10.37□□□□□ -0.75
NPHP4-203ENST00000378169 CHTOPQ9Y3Y2 248 aaKnown RBP10.37□□□□□ -0.75
NPHP4-203ENST00000378169 PRRC2AP48634 2157 aaKnown RBP10.37□□□□□ -0.75
NPHP4-203ENST00000378169 SPRY2O43597 315 aa10.37□□□□□ -0.75
NPHP4-203ENST00000378169 DEFB112Q30KQ8 113 aa10.37□□□□□ -0.75
NPHP4-203ENST00000378169 FAM167A-AS1Q96KT0 104 aa10.37□□□□□ -0.75
NPHP4-203ENST00000378169 CSTL1Q9H114 145 aa10.37□□□□□ -0.75
NPHP4-203ENST00000378169 RPL35AP18077 110 aaKnown RBP10.37□□□□□ -0.75
NPHP4-203ENST00000378169 OR2K2Q8NGT1 345 aa10.37□□□□□ -0.75
NPHP4-203ENST00000378169 TRAV26-2A0A0B4J265 109 aa10.36□□□□□ -0.75
NPHP4-203ENST00000378169 Q71RC1 249 aaPredicted RBP10.36□□□□□ -0.75
NPHP4-203ENST00000378169 TMEM190Q8WZ59 177 aa10.36□□□□□ -0.75
NPHP4-203ENST00000378169 TRGV1A0A0A0MS02 117 aa10.36□□□□□ -0.75
NPHP4-203ENST00000378169 CD28P10747 220 aa10.36□□□□□ -0.75
NPHP4-203ENST00000378169 KLK9Q9UKQ9 250 aa10.36□□□□□ -0.75
NPHP4-203ENST00000378169 ZNF815PA8K554 130 aa10.35□□□□□ -0.75
NPHP4-203ENST00000378169 DYNAPQ8N1N2 210 aa10.35□□□□□ -0.75
NPHP4-203ENST00000378169 C2orf88Q9BSF0 95 aa10.35□□□□□ -0.75
NPHP4-203ENST00000378169 MS4A6AQ9H2W1 248 aa10.35□□□□□ -0.75
NPHP4-203ENST00000378169 SPCS1Q9Y6A9 102 aa10.35□□□□□ -0.75
NPHP4-203ENST00000378169 TRGV4A0A0C4DH28 118 aa10.35□□□□□ -0.75
NPHP4-203ENST00000378169 CTSGP08311 255 aa10.35□□□□□ -0.75
NPHP4-203ENST00000378169 DAZAP2Q15038 168 aaPredicted RBP10.35□□□□□ -0.75
NPHP4-203ENST00000378169 Q8N9W7 124 aa10.35□□□□□ -0.75
NPHP4-203ENST00000378169 TEX22C9J3V5 150 aa10.35□□□□□ -0.75
NPHP4-203ENST00000378169 NDUFA4O00483 81 aa10.35□□□□□ -0.75
NPHP4-203ENST00000378169 EREGO14944 169 aa10.35□□□□□ -0.75
NPHP4-203ENST00000378169 FRMD6-AS1P0C7T7 363 aa10.35□□□□□ -0.75
NPHP4-203ENST00000378169 GP9P14770 177 aa10.35□□□□□ -0.75
NPHP4-203ENST00000378169 MRPL51Q4U2R6 128 aaKnown RBP10.35□□□□□ -0.75
NPHP4-203ENST00000378169 TCTEX1D4Q5JR98 221 aa10.35□□□□□ -0.75
NPHP4-203ENST00000378169 XCL2Q9UBD3 114 aa10.35□□□□□ -0.75
NPHP4-203ENST00000378169 FBXL19-AS1Q494R0 122 aa10.34□□□□□ -0.75
NPHP4-203ENST00000378169 TMEM101Q96IK0 257 aa10.34□□□□□ -0.75
NPHP4-203ENST00000378169 IGLV11-55A0A075B6I3 123 aa10.34□□□□□ -0.75
NPHP4-203ENST00000378169 COTL1Q14019 142 aa10.34□□□□□ -0.75
NPHP4-203ENST00000378169 AGPAT4-IT1Q9H0P7 198 aa10.34□□□□□ -0.75
NPHP4-203ENST00000378169 PRSS46E5RG02 174 aa10.34□□□□□ -0.75
NPHP4-203ENST00000378169 HOXA3O43365 443 aaPredicted RBP10.34□□□□□ -0.75
NPHP4-203ENST00000378169 LTAP01374 205 aa10.34□□□□□ -0.75
NPHP4-203ENST00000378169 ANXA2RQ3ZCQ2 193 aa10.34□□□□□ -0.75
NPHP4-203ENST00000378169 LINC00469Q8N7U9 141 aa10.34□□□□□ -0.75
NPHP4-203ENST00000378169 CELSR3Q9NYQ7 3312 aa10.34□□□□□ -0.75
NPHP4-203ENST00000378169 NUPR1O60356 82 aa10.34□□□□□ -0.75
NPHP4-203ENST00000378169 PYGO2Q9BRQ0 406 aa10.34□□□□□ -0.75
NPHP4-203ENST00000378169 EGR2P11161 476 aaPredicted RBP10.33□□□□□ -0.76
NPHP4-203ENST00000378169 ORAOV1Q8WV07 137 aa10.33□□□□□ -0.76
NPHP4-203ENST00000378169 PHLDA1Q8WV24 401 aaPredicted RBP10.32□□□□□ -0.76
NPHP4-203ENST00000378169 DSCAML1Q8TD84 2053 aa10.32□□□□□ -0.76
NPHP4-203ENST00000378169 NPYP01303 97 aa10.32□□□□□ -0.76
NPHP4-203ENST00000378169 FOXE3Q13461 319 aa10.32□□□□□ -0.76
NPHP4-203ENST00000378169 DEFB136Q30KP8 78 aa10.32□□□□□ -0.76
NPHP4-203ENST00000378169 DTX2Q86UW9 622 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 569.3 ms