RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 IGLV2-18A0A075B6J9 118 aa8.97□□□□□ -0.97
TNFRSF9-201ENST00000377507 IGHV3-49A0A0A0MS15 119 aa8.97□□□□□ -0.97
TNFRSF9-201ENST00000377507 SNAI2O43623 268 aa8.97□□□□□ -0.97
TNFRSF9-201ENST00000377507 ZNF207O43670 478 aaKnown RBP8.97□□□□□ -0.97
TNFRSF9-201ENST00000377507 C9orf139Q6ZV77 190 aa8.97□□□□□ -0.97
TNFRSF9-201ENST00000377507 ZMAT4Q9H898 229 aa8.97□□□□□ -0.97
TNFRSF9-201ENST00000377507 COL6A6A6NMZ7 2263 aa8.97□□□□□ -0.97
TNFRSF9-201ENST00000377507 H3BUA1 57 aa8.97□□□□□ -0.97
TNFRSF9-201ENST00000377507 SIVA1O15304 175 aa8.97□□□□□ -0.97
TNFRSF9-201ENST00000377507 TRGV3P03979 118 aa8.97□□□□□ -0.97
TNFRSF9-201ENST00000377507 GNLYP22749 145 aa8.97□□□□□ -0.97
TNFRSF9-201ENST00000377507 PPIFP30405 207 aaKnown RBP8.97□□□□□ -0.97
TNFRSF9-201ENST00000377507 PSMG4Q5JS54 123 aa8.97□□□□□ -0.97
TNFRSF9-201ENST00000377507 NDUFA4O00483 81 aa8.96□□□□□ -0.97
TNFRSF9-201ENST00000377507 ARL3P36405 182 aa8.96□□□□□ -0.97
TNFRSF9-201ENST00000377507 LEPP41159 167 aa8.96□□□□□ -0.97
TNFRSF9-201ENST00000377507 GPHB5Q86YW7 130 aa8.96□□□□□ -0.97
TNFRSF9-201ENST00000377507 Q8N8P6 123 aa8.96□□□□□ -0.97
TNFRSF9-201ENST00000377507 SPTBN1Q01082 2364 aaKnown RBP8.96□□□□□ -0.98
TNFRSF9-201ENST00000377507 SVEP1Q4LDE5 3571 aa8.96□□□□□ -0.98
TNFRSF9-201ENST00000377507 IGHV4-61A0A0C4DH41 118 aa8.95□□□□□ -0.98
TNFRSF9-201ENST00000377507 K7EP13 123 aa8.95□□□□□ -0.98
TNFRSF9-201ENST00000377507 SOCS3O14543 225 aa8.95□□□□□ -0.98
TNFRSF9-201ENST00000377507 IGHG2P01859 326 aa8.95□□□□□ -0.98
TNFRSF9-201ENST00000377507 EVI2AP22794 236 aa8.95□□□□□ -0.98
TNFRSF9-201ENST00000377507 SEC11AP67812 179 aa8.95□□□□□ -0.98
TNFRSF9-201ENST00000377507 TMEM97Q5BJF2 176 aa8.95□□□□□ -0.98
TNFRSF9-201ENST00000377507 NRACQ8N912 160 aa8.95□□□□□ -0.98
TNFRSF9-201ENST00000377507 OR9G4Q8NGQ1 327 aa8.95□□□□□ -0.98
TNFRSF9-201ENST00000377507 USMG5Q96IX5 58 aa8.95□□□□□ -0.98
TNFRSF9-201ENST00000377507 C16orf92Q96LL3 132 aa8.95□□□□□ -0.98
TNFRSF9-201ENST00000377507 C20orf173Q96LM9 149 aa8.95□□□□□ -0.98
TNFRSF9-201ENST00000377507 IGHV3OR16-10A0A075B7F0 116 aa8.95□□□□□ -0.98
TNFRSF9-201ENST00000377507 SMAD7O15105 426 aaKnown RBP8.95□□□□□ -0.98
TNFRSF9-201ENST00000377507 GATA1P15976 413 aaPredicted RBP8.95□□□□□ -0.98
TNFRSF9-201ENST00000377507 UNQ9165/PRO28630Q6UXU0 137 aa8.95□□□□□ -0.98
TNFRSF9-201ENST00000377507 BRD3OSQ6XYD6 125 aa8.95□□□□□ -0.98
TNFRSF9-201ENST00000377507 OR2K2Q8NGT1 345 aa8.95□□□□□ -0.98
TNFRSF9-201ENST00000377507 C10orf105Q8TEF2 133 aa8.95□□□□□ -0.98
TNFRSF9-201ENST00000377507 LINC00477Q96M19 166 aa8.95□□□□□ -0.98
TNFRSF9-201ENST00000377507 PIMREGQ9BSJ6 248 aa8.95□□□□□ -0.98
TNFRSF9-201ENST00000377507 DKK2Q9UBU2 259 aa8.95□□□□□ -0.98
TNFRSF9-201ENST00000377507 LINC00527Q9UJ94 153 aa8.95□□□□□ -0.98
TNFRSF9-201ENST00000377507 TRAV40A0A0B4J280 105 aa8.94□□□□□ -0.98
TNFRSF9-201ENST00000377507 A6NDX4 124 aa8.94□□□□□ -0.98
TNFRSF9-201ENST00000377507 NDUFS8O00217 210 aa8.94□□□□□ -0.98
TNFRSF9-201ENST00000377507 ODF1Q14990 250 aa8.94□□□□□ -0.98
TNFRSF9-201ENST00000377507 PRR9Q5T870 116 aa8.94□□□□□ -0.98
TNFRSF9-201ENST00000377507 Q6ZQT7 251 aa8.94□□□□□ -0.98
TNFRSF9-201ENST00000377507 HHLA3Q9XRX5 114 aa8.94□□□□□ -0.98
TNFRSF9-201ENST00000377507 TRBV12-3P01733 135 aa8.93□□□□□ -0.98
TNFRSF9-201ENST00000377507 VAMP3Q15836 100 aa8.93□□□□□ -0.98
TNFRSF9-201ENST00000377507 ADAMTSL5Q6ZMM2 481 aa8.93□□□□□ -0.98
TNFRSF9-201ENST00000377507 SMIM15Q7Z3B0 74 aa8.93□□□□□ -0.98
TNFRSF9-201ENST00000377507 ZFAND2AQ8N6M9 145 aa8.93□□□□□ -0.98
TNFRSF9-201ENST00000377507 FAM19A4Q96LR4 140 aa8.93□□□□□ -0.98
TNFRSF9-201ENST00000377507 OVOL1O14753 267 aa8.93□□□□□ -0.98
TNFRSF9-201ENST00000377507 KIR3DS1Q14943 382 aa8.93□□□□□ -0.98
TNFRSF9-201ENST00000377507 APRG1Q8IVJ8 170 aa8.93□□□□□ -0.98
TNFRSF9-201ENST00000377507 A1L4Q6 167 aa8.92□□□□□ -0.98
TNFRSF9-201ENST00000377507 CBY3A6NI87 242 aa8.92□□□□□ -0.98
TNFRSF9-201ENST00000377507 IGHV4-38-2P0DP08 117 aa8.92□□□□□ -0.98
TNFRSF9-201ENST00000377507 WFDC3Q8IUB2 231 aa8.92□□□□□ -0.98
TNFRSF9-201ENST00000377507 OR4X2Q8NGF9 303 aa8.92□□□□□ -0.98
TNFRSF9-201ENST00000377507 TMEM158Q8WZ71 300 aa8.92□□□□□ -0.98
TNFRSF9-201ENST00000377507 C18orf15Q96N68 181 aa8.92□□□□□ -0.98
TNFRSF9-201ENST00000377507 SMPXQ9UHP9 88 aa8.92□□□□□ -0.98
TNFRSF9-201ENST00000377507 ASH1LQ9NR48 2969 aaKnown RBP8.92□□□□□ -0.98
TNFRSF9-201ENST00000377507 TRBV7-9A0A0J9YWB2 115 aa8.92□□□□□ -0.98
TNFRSF9-201ENST00000377507 ATP5LO75964 103 aa8.92□□□□□ -0.98
TNFRSF9-201ENST00000377507 IGLV1-40P01703 118 aa8.92□□□□□ -0.98
TNFRSF9-201ENST00000377507 HSD52Q0P140 79 aa8.92□□□□□ -0.98
TNFRSF9-201ENST00000377507 MRAP2Q96G30 205 aa8.92□□□□□ -0.98
TNFRSF9-201ENST00000377507 ABCA2Q9BZC7 2435 aa8.91□□□□□ -0.98
TNFRSF9-201ENST00000377507 SMIM17P0DL12 118 aa8.91□□□□□ -0.98
TNFRSF9-201ENST00000377507 LAGE3Q14657 143 aa8.91□□□□□ -0.98
TNFRSF9-201ENST00000377507 SPANXN1Q5VSR9 72 aa8.91□□□□□ -0.98
TNFRSF9-201ENST00000377507 PCP2Q8IVA1 136 aa8.91□□□□□ -0.98
TNFRSF9-201ENST00000377507 OR4C5Q8NGB2 326 aa8.91□□□□□ -0.98
TNFRSF9-201ENST00000377507 OR10J6PQ8NGY7 276 aa8.91□□□□□ -0.98
TNFRSF9-201ENST00000377507 CCL19Q99731 98 aa8.91□□□□□ -0.98
TNFRSF9-201ENST00000377507 KLK15Q9H2R5 256 aa8.91□□□□□ -0.98
TNFRSF9-201ENST00000377507 PEF1Q9UBV8 284 aaKnown RBP8.91□□□□□ -0.98
TNFRSF9-201ENST00000377507 PIEZO1Q92508 2521 aa8.91□□□□□ -0.98
TNFRSF9-201ENST00000377507 TRAV21A0A0B4J279 112 aa8.9□□□□□ -0.98
TNFRSF9-201ENST00000377507 C7orf71A4D174 169 aa8.9□□□□□ -0.98
TNFRSF9-201ENST00000377507 MED14OSP0DP75 135 aa8.9□□□□□ -0.98
TNFRSF9-201ENST00000377507 CFHR3Q02985 330 aa8.9□□□□□ -0.98
TNFRSF9-201ENST00000377507 AMMECR1LQ6DCA0 310 aa8.9□□□□□ -0.98
TNFRSF9-201ENST00000377507 ZNF580Q9UK33 172 aa8.9□□□□□ -0.98
TNFRSF9-201ENST00000377507 CACNA1BQ00975 2339 aa8.9□□□□□ -0.98
TNFRSF9-201ENST00000377507 TRAV8-6A0A0B4J262 113 aa8.9□□□□□ -0.99
TNFRSF9-201ENST00000377507 TRAV26-2A0A0B4J265 109 aa8.9□□□□□ -0.99
TNFRSF9-201ENST00000377507 H3BRM9 83 aa8.9□□□□□ -0.99
TNFRSF9-201ENST00000377507 H3BUX3 64 aa8.9□□□□□ -0.99
TNFRSF9-201ENST00000377507 H3BVH4 76 aa8.9□□□□□ -0.99
TNFRSF9-201ENST00000377507 PRSS1P07477 247 aa8.9□□□□□ -0.99
TNFRSF9-201ENST00000377507 SRSF1Q07955 248 aaKnown RBP eCLIP8.9□□□□□ -0.99
TNFRSF9-201ENST00000377507 HIGD1BQ9P298 99 aa8.9□□□□□ -0.99
TNFRSF9-201ENST00000377507 CBY1Q9Y3M2 126 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms