RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 TRAV13-1A0A0B4J241 112 aa14.09□□□□□ -0.15
CLSTN1-202ENST00000377298 CFHR3Q02985 330 aa14.09□□□□□ -0.15
CLSTN1-202ENST00000377298 Q0VG73 95 aa14.09□□□□□ -0.15
CLSTN1-202ENST00000377298 TRAV12-2A0A075B6T6 113 aa14.08□□□□□ -0.16
CLSTN1-202ENST00000377298 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.08□□□□□ -0.16
CLSTN1-202ENST00000377298 C20orf144Q9BQM9 153 aa14.08□□□□□ -0.16
CLSTN1-202ENST00000377298 CCL24O00175 119 aa14.08□□□□□ -0.16
CLSTN1-202ENST00000377298 PAX4O43316 350 aa14.08□□□□□ -0.16
CLSTN1-202ENST00000377298 PLA2G5P39877 138 aa14.08□□□□□ -0.16
CLSTN1-202ENST00000377298 FOXI2Q6ZQN5 318 aa14.08□□□□□ -0.16
CLSTN1-202ENST00000377298 ADAMTS9Q9P2N4 1935 aa14.08□□□□□ -0.16
CLSTN1-202ENST00000377298 GAGE12JA6NER3 117 aa14.08□□□□□ -0.16
CLSTN1-202ENST00000377298 GAGE1Q13065 139 aa14.08□□□□□ -0.16
CLSTN1-202ENST00000377298 GAGE4Q13068 117 aa14.08□□□□□ -0.16
CLSTN1-202ENST00000377298 GAGE5Q13069 117 aa14.08□□□□□ -0.16
CLSTN1-202ENST00000377298 GAGE13Q4V321 117 aa14.08□□□□□ -0.16
CLSTN1-202ENST00000377298 MRPL53Q96EL3 112 aaKnown RBP14.08□□□□□ -0.16
CLSTN1-202ENST00000377298 COL4A3Q01955 1670 aa14.07□□□□□ -0.16
CLSTN1-202ENST00000377298 LYPD6BQ8NI32 183 aa14.07□□□□□ -0.16
CLSTN1-202ENST00000377298 A0A1B0GUS0 222 aa14.07□□□□□ -0.16
CLSTN1-202ENST00000377298 SPXQ9BT56 116 aa14.07□□□□□ -0.16
CLSTN1-202ENST00000377298 hDV102S1A0JD36 115 aa14.07□□□□□ -0.16
CLSTN1-202ENST00000377298 SSBP2P81877 361 aaPredicted RBP14.07□□□□□ -0.16
CLSTN1-202ENST00000377298 SNHG12Q9BXW3 62 aa14.07□□□□□ -0.16
CLSTN1-202ENST00000377298 MPV17L2Q567V2 206 aa14.06□□□□□ -0.16
CLSTN1-202ENST00000377298 V9GYV3 84 aa14.06□□□□□ -0.16
CLSTN1-202ENST00000377298 UBE2V1Q13404 147 aa14.06□□□□□ -0.16
CLSTN1-202ENST00000377298 GUSBP1Q15486 140 aa14.06□□□□□ -0.16
CLSTN1-202ENST00000377298 ZC2HC1BQ5TFG8 222 aa14.06□□□□□ -0.16
CLSTN1-202ENST00000377298 GAGE12BA1L429 117 aa14.06□□□□□ -0.16
CLSTN1-202ENST00000377298 I3L3M4 83 aa14.06□□□□□ -0.16
CLSTN1-202ENST00000377298 M0R2P5 195 aa14.06□□□□□ -0.16
CLSTN1-202ENST00000377298 GAGE7O76087 117 aa14.06□□□□□ -0.16
CLSTN1-202ENST00000377298 GAGE12FP0CL80 117 aa14.06□□□□□ -0.16
CLSTN1-202ENST00000377298 GAGE12GP0CL81 117 aa14.06□□□□□ -0.16
CLSTN1-202ENST00000377298 GAGE12IP0CL82 117 aa14.06□□□□□ -0.16
CLSTN1-202ENST00000377298 NRGNQ92686 78 aa14.06□□□□□ -0.16
CLSTN1-202ENST00000377298 ANKHD1Q8IWZ3 2542 aaKnown RBP14.06□□□□□ -0.16
CLSTN1-202ENST00000377298 MYMXA0A1B0GTQ4 84 aa14.06□□□□□ -0.16
CLSTN1-202ENST00000377298 ERG28Q9UKR5 140 aa14.06□□□□□ -0.16
CLSTN1-202ENST00000377298 TRBV25-1A0A075B6N4 114 aa14.05□□□□□ -0.16
CLSTN1-202ENST00000377298 TSPAN13O95857 204 aa14.05□□□□□ -0.16
CLSTN1-202ENST00000377298 Q8N8P6 123 aa14.05□□□□□ -0.16
CLSTN1-202ENST00000377298 MRAPQ8TCY5 172 aa14.05□□□□□ -0.16
CLSTN1-202ENST00000377298 LENEPQ9Y5L5 61 aa14.05□□□□□ -0.16
CLSTN1-202ENST00000377298 ZC2HC1AQ96GY0 325 aa14.05□□□□□ -0.16
CLSTN1-202ENST00000377298 TIMM21Q9BVV7 248 aa14.05□□□□□ -0.16
CLSTN1-202ENST00000377298 IGLV11-55A0A075B6I3 123 aa14.05□□□□□ -0.16
CLSTN1-202ENST00000377298 IGLV1-47P01700 117 aa14.05□□□□□ -0.16
CLSTN1-202ENST00000377298 BLCAPP62952 87 aa14.05□□□□□ -0.16
CLSTN1-202ENST00000377298 SPG11Q96JI7 2443 aa14.04□□□□□ -0.16
CLSTN1-202ENST00000377298 SRSF2Q01130 221 aaKnown RBP14.04□□□□□ -0.16
CLSTN1-202ENST00000377298 OTOGLQ3ZCN5 2332 aa14.04□□□□□ -0.16
CLSTN1-202ENST00000377298 OBSL1O75147 1896 aa14.04□□□□□ -0.16
CLSTN1-202ENST00000377298 I3L2K1 104 aa14.04□□□□□ -0.16
CLSTN1-202ENST00000377298 TMEM95Q3KNT9 176 aa14.04□□□□□ -0.16
CLSTN1-202ENST00000377298 Q8N9W7 124 aa14.04□□□□□ -0.16
CLSTN1-202ENST00000377298 C18orf32Q8TCD1 76 aa14.04□□□□□ -0.16
CLSTN1-202ENST00000377298 CACNA1AO00555 2505 aa14.04□□□□□ -0.16
CLSTN1-202ENST00000377298 IGHV3-16A0A0C4DH30 117 aa14.04□□□□□ -0.16
CLSTN1-202ENST00000377298 SMIM27A0A1W2PRY6 76 aa14.04□□□□□ -0.16
CLSTN1-202ENST00000377298 SFTA2Q6UW10 78 aa14.04□□□□□ -0.16
CLSTN1-202ENST00000377298 TMEM141Q96I45 108 aa14.04□□□□□ -0.16
CLSTN1-202ENST00000377298 MSMPQ1L6U9 139 aa14.04□□□□□ -0.16
CLSTN1-202ENST00000377298 C2orf66Q6UXQ4 117 aa14.04□□□□□ -0.16
CLSTN1-202ENST00000377298 TP53TG1Q9Y2A0 90 aa14.03□□□□□ -0.16
CLSTN1-202ENST00000377298 DOCK11Q5JSL3 2073 aa14.03□□□□□ -0.16
CLSTN1-202ENST00000377298 SDHAF1A6NFY7 115 aa14.03□□□□□ -0.16
CLSTN1-202ENST00000377298 K7EIM0 57 aa14.03□□□□□ -0.16
CLSTN1-202ENST00000377298 ZFP36P26651 326 aaKnown RBP14.03□□□□□ -0.16
CLSTN1-202ENST00000377298 ZNF479Q96JC4 524 aa14.03□□□□□ -0.16
CLSTN1-202ENST00000377298 RBAKDNA6NC62 111 aa14.03□□□□□ -0.16
CLSTN1-202ENST00000377298 C5orf56Q8N8D9 126 aa14.02□□□□□ -0.16
CLSTN1-202ENST00000377298 A0A087X0K7 114 aa14.02□□□□□ -0.16
CLSTN1-202ENST00000377298 MRPL51Q4U2R6 128 aaKnown RBP14.02□□□□□ -0.16
CLSTN1-202ENST00000377298 SAMD5Q5TGI4 173 aa14.02□□□□□ -0.16
CLSTN1-202ENST00000377298 LTAP01374 205 aa14.02□□□□□ -0.17
CLSTN1-202ENST00000377298 PRIMA1Q86XR5 153 aa14.02□□□□□ -0.17
CLSTN1-202ENST00000377298 Q8N7P7 452 aa14.02□□□□□ -0.17
CLSTN1-202ENST00000377298 SPAG8Q99932 426 aaPredicted RBP14.02□□□□□ -0.17
CLSTN1-202ENST00000377298 BCL6BQ8N143 479 aaPredicted RBP14.01□□□□□ -0.17
CLSTN1-202ENST00000377298 IGFBPL1Q8WX77 278 aa14.01□□□□□ -0.17
CLSTN1-202ENST00000377298 ZNF561-AS1K7EIQ3 104 aa14.01□□□□□ -0.17
CLSTN1-202ENST00000377298 ZNRF2Q8NHG8 242 aa14.01□□□□□ -0.17
CLSTN1-202ENST00000377298 RITA1Q96K30 269 aa14.01□□□□□ -0.17
CLSTN1-202ENST00000377298 C17orf77Q96MU5 243 aa14.01□□□□□ -0.17
CLSTN1-202ENST00000377298 AGPAT4-IT1Q9H0P7 198 aa14.01□□□□□ -0.17
CLSTN1-202ENST00000377298 COL4A4P53420 1690 aaPredicted RBP14.01□□□□□ -0.17
CLSTN1-202ENST00000377298 PRSS57Q6UWY2 283 aa14□□□□□ -0.17
CLSTN1-202ENST00000377298 DEFB136Q30KP8 78 aa14□□□□□ -0.17
CLSTN1-202ENST00000377298 AJUBAQ96IF1 538 aa14□□□□□ -0.17
CLSTN1-202ENST00000377298 IGKV1-17P01599 117 aa14□□□□□ -0.17
CLSTN1-202ENST00000377298 DYNAPQ8N1N2 210 aa14□□□□□ -0.17
CLSTN1-202ENST00000377298 NAA38Q9BRA0 125 aaKnown RBP14□□□□□ -0.17
CLSTN1-202ENST00000377298 TMEM243Q9BU79 118 aa14□□□□□ -0.17
CLSTN1-202ENST00000377298 PYGO2Q9BRQ0 406 aa13.99□□□□□ -0.17
CLSTN1-202ENST00000377298 SLAQ13239 276 aa13.99□□□□□ -0.17
CLSTN1-202ENST00000377298 C9orf66Q5T8R8 295 aa13.99□□□□□ -0.17
CLSTN1-202ENST00000377298 SIRPDQ9H106 197 aa13.99□□□□□ -0.17
CLSTN1-202ENST00000377298 RMI2Q96E14 147 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms