RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 J3KRW8 73 aa7.09□□□□□ -1.27
SHROOM4-202ENST00000376020 CTRLP40313 264 aa7.09□□□□□ -1.27
SHROOM4-202ENST00000376020 HERVK_113P63121 156 aa7.09□□□□□ -1.27
SHROOM4-202ENST00000376020 C12orf74Q32Q52 190 aa7.09□□□□□ -1.27
SHROOM4-202ENST00000376020 VMO1Q7Z5L0 202 aa7.09□□□□□ -1.27
SHROOM4-202ENST00000376020 HERV-K104P63124 156 aa7.09□□□□□ -1.28
SHROOM4-202ENST00000376020 TMEM200BQ69YZ2 307 aa7.09□□□□□ -1.28
SHROOM4-202ENST00000376020 POLQO75417 2590 aa7.09□□□□□ -1.28
SHROOM4-202ENST00000376020 C15orf65H3BRN8 121 aa7.08□□□□□ -1.28
SHROOM4-202ENST00000376020 MED14OSP0DP75 135 aa7.08□□□□□ -1.28
SHROOM4-202ENST00000376020 JPT2Q9H910 190 aa7.08□□□□□ -1.28
SHROOM4-202ENST00000376020 J3QQQ9 107 aa7.08□□□□□ -1.28
SHROOM4-202ENST00000376020 IGKV1-16P04430 117 aa7.08□□□□□ -1.28
SHROOM4-202ENST00000376020 ERCC8Q13216 396 aa7.08□□□□□ -1.28
SHROOM4-202ENST00000376020 MDS2Q8NDY4 140 aa7.08□□□□□ -1.28
SHROOM4-202ENST00000376020 PRTN3P24158 256 aa7.08□□□□□ -1.28
SHROOM4-202ENST00000376020 TRAV40A0A0B4J280 105 aa7.08□□□□□ -1.28
SHROOM4-202ENST00000376020 CRYBA4P53673 196 aa7.08□□□□□ -1.28
SHROOM4-202ENST00000376020 CLEC19AQ6UXS0 136 aa7.08□□□□□ -1.28
SHROOM4-202ENST00000376020 VWC2LB2RUY7 222 aa7.08□□□□□ -1.28
SHROOM4-202ENST00000376020 FGF6P10767 208 aa7.08□□□□□ -1.28
SHROOM4-202ENST00000376020 MNX1P50219 401 aaPredicted RBP7.08□□□□□ -1.28
SHROOM4-202ENST00000376020 IGKV3-7A0A075B6H7 116 aa7.08□□□□□ -1.28
SHROOM4-202ENST00000376020 IGKV1-39P01597 117 aa7.07□□□□□ -1.28
SHROOM4-202ENST00000376020 IGKV1D-39P04432 117 aa7.07□□□□□ -1.28
SHROOM4-202ENST00000376020 CD59P13987 128 aa7.07□□□□□ -1.28
SHROOM4-202ENST00000376020 RCHY1Q96PM5 261 aa7.07□□□□□ -1.28
SHROOM4-202ENST00000376020 ATP5EP2Q5VTU8 51 aa7.07□□□□□ -1.28
SHROOM4-202ENST00000376020 PRADC1Q9BSG0 188 aa7.07□□□□□ -1.28
SHROOM4-202ENST00000376020 C11orf1Q9H5F2 150 aa7.07□□□□□ -1.28
SHROOM4-202ENST00000376020 EDA2RQ9HAV5 297 aa7.07□□□□□ -1.28
SHROOM4-202ENST00000376020 FDCSPQ8NFU4 85 aa7.07□□□□□ -1.28
SHROOM4-202ENST00000376020 GAFA1Q96PS6 74 aa7.07□□□□□ -1.28
SHROOM4-202ENST00000376020 NDUFS7O75251 213 aa7.07□□□□□ -1.28
SHROOM4-202ENST00000376020 SPANXB1Q9NS25 103 aaPredicted RBP7.07□□□□□ -1.28
SHROOM4-202ENST00000376020 MRPL35Q9NZE8 188 aaKnown RBP7.07□□□□□ -1.28
SHROOM4-202ENST00000376020 TEX48A0A1B0GUV7 120 aa7.07□□□□□ -1.28
SHROOM4-202ENST00000376020 CCL3L1P16619 93 aa7.07□□□□□ -1.28
SHROOM4-202ENST00000376020 DEFB124Q8NES8 71 aa7.07□□□□□ -1.28
SHROOM4-202ENST00000376020 YPEL4Q96NS1 127 aa7.07□□□□□ -1.28
SHROOM4-202ENST00000376020 ANKRD39Q53RE8 183 aa7.07□□□□□ -1.28
SHROOM4-202ENST00000376020 STPG1Q5TH74 334 aa7.07□□□□□ -1.28
SHROOM4-202ENST00000376020 FAM110DQ8TAY7 271 aaPredicted RBP7.07□□□□□ -1.28
SHROOM4-202ENST00000376020 NCR2O95944 276 aa7.07□□□□□ -1.28
SHROOM4-202ENST00000376020 PRIMA1Q86XR5 153 aa7.07□□□□□ -1.28
SHROOM4-202ENST00000376020 CARD19Q96LW7 228 aa7.07□□□□□ -1.28
SHROOM4-202ENST00000376020 IGLV3-9A0A075B6K5 115 aa7.06□□□□□ -1.28
SHROOM4-202ENST00000376020 C9orf106Q8NAJ2 232 aa7.06□□□□□ -1.28
SHROOM4-202ENST00000376020 ZNF784Q8NCA9 323 aaPredicted RBP7.06□□□□□ -1.28
SHROOM4-202ENST00000376020 BMPERQ8N8U9 685 aa7.06□□□□□ -1.28
SHROOM4-202ENST00000376020 PRSS22Q9GZN4 317 aa7.06□□□□□ -1.28
SHROOM4-202ENST00000376020 IGLV1-44P01699 117 aa7.06□□□□□ -1.28
SHROOM4-202ENST00000376020 CFC1BP0CG36 223 aa7.06□□□□□ -1.28
SHROOM4-202ENST00000376020 CFC1P0CG37 223 aa7.06□□□□□ -1.28
SHROOM4-202ENST00000376020 IGF2BP2-AS1Q96M15 143 aa7.06□□□□□ -1.28
SHROOM4-202ENST00000376020 TM2D2Q9BX73 214 aa7.06□□□□□ -1.28
SHROOM4-202ENST00000376020 TP53TG1Q9Y2A0 90 aa7.06□□□□□ -1.28
SHROOM4-202ENST00000376020 SDHAF1A6NFY7 115 aa7.06□□□□□ -1.28
SHROOM4-202ENST00000376020 K7EN84 100 aa7.06□□□□□ -1.28
SHROOM4-202ENST00000376020 CR1LQ2VPA4 569 aa7.06□□□□□ -1.28
SHROOM4-202ENST00000376020 PRSS57Q6UWY2 283 aa7.06□□□□□ -1.28
SHROOM4-202ENST00000376020 TIMM17AQ99595 171 aa7.06□□□□□ -1.28
SHROOM4-202ENST00000376020 CITED2Q99967 270 aaPredicted RBP7.06□□□□□ -1.28
SHROOM4-202ENST00000376020 LINC01619G3V211 115 aa7.05□□□□□ -1.28
SHROOM4-202ENST00000376020 NDUFC2O95298 119 aa7.05□□□□□ -1.28
SHROOM4-202ENST00000376020 CELA3AP09093 270 aa7.05□□□□□ -1.28
SHROOM4-202ENST00000376020 CEACAM8P31997 349 aaPredicted RBP7.05□□□□□ -1.28
SHROOM4-202ENST00000376020 TRGV2A0A075B6R0 118 aa7.05□□□□□ -1.28
SHROOM4-202ENST00000376020 TRAV3A0A0B4J244 114 aa7.05□□□□□ -1.28
SHROOM4-202ENST00000376020 ADARB2-AS1A8MUL3 147 aa7.05□□□□□ -1.28
SHROOM4-202ENST00000376020 FAM168AQ92567 244 aa7.05□□□□□ -1.28
SHROOM4-202ENST00000376020 RNF166Q96A37 237 aaPredicted RBP7.05□□□□□ -1.28
SHROOM4-202ENST00000376020 IGKV2-40A0A087WW87 121 aaPredicted RBP7.05□□□□□ -1.28
SHROOM4-202ENST00000376020 IGKV2D-40P01614 121 aaPredicted RBP7.05□□□□□ -1.28
SHROOM4-202ENST00000376020 FGFBP3Q8TAT2 258 aa7.05□□□□□ -1.28
SHROOM4-202ENST00000376020 LINC01587Q99440 93 aa7.05□□□□□ -1.28
SHROOM4-202ENST00000376020 NDUFA4O00483 81 aa7.05□□□□□ -1.28
SHROOM4-202ENST00000376020 RNASE8Q8TDE3 154 aaKnown RBP7.05□□□□□ -1.28
SHROOM4-202ENST00000376020 ATP5J2P56134 94 aa7.05□□□□□ -1.28
SHROOM4-202ENST00000376020 CHD8Q9HCK8 2581 aa7.05□□□□□ -1.28
SHROOM4-202ENST00000376020 WFDC3Q8IUB2 231 aa7.05□□□□□ -1.28
SHROOM4-202ENST00000376020 C14orf178Q8N769 122 aaPredicted RBP7.05□□□□□ -1.28
SHROOM4-202ENST00000376020 ATP5EP56381 51 aaPredicted RBP7.04□□□□□ -1.28
SHROOM4-202ENST00000376020 FOXI1Q12951 378 aa7.04□□□□□ -1.28
SHROOM4-202ENST00000376020 ZC2HC1AQ96GY0 325 aa7.04□□□□□ -1.28
SHROOM4-202ENST00000376020 MUC22E2RYF6 1773 aaPredicted RBP7.04□□□□□ -1.28
SHROOM4-202ENST00000376020 IGLL5B9A064 214 aa7.04□□□□□ -1.28
SHROOM4-202ENST00000376020 WT1-ASQ06250 92 aa7.04□□□□□ -1.28
SHROOM4-202ENST00000376020 PAX4O43316 350 aa7.04□□□□□ -1.28
SHROOM4-202ENST00000376020 IGFL3Q6UXB1 125 aa7.04□□□□□ -1.28
SHROOM4-202ENST00000376020 WIPF3A6NGB9 483 aa7.04□□□□□ -1.28
SHROOM4-202ENST00000376020 PKIGQ9Y2B9 76 aa7.04□□□□□ -1.28
SHROOM4-202ENST00000376020 P0C879 139 aa7.04□□□□□ -1.28
SHROOM4-202ENST00000376020 ZNF876PQ49A33 203 aa7.04□□□□□ -1.28
SHROOM4-202ENST00000376020 NDUFA12Q9UI09 145 aa7.04□□□□□ -1.28
SHROOM4-202ENST00000376020 A0A1B0GXF2 115 aa7.03□□□□□ -1.28
SHROOM4-202ENST00000376020 TAX1BP3O14907 124 aa7.03□□□□□ -1.28
SHROOM4-202ENST00000376020 RNASE1P07998 156 aaKnown RBP7.03□□□□□ -1.28
SHROOM4-202ENST00000376020 SPAG8Q99932 426 aaPredicted RBP7.03□□□□□ -1.28
SHROOM4-202ENST00000376020 SPRR3Q9UBC9 169 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms