RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 IGHV4-39P01824 125 aa10.74□□□□□ -0.69
C9orf47-203ENST00000375851 IGHV4-59P01825 116 aa10.74□□□□□ -0.69
C9orf47-203ENST00000375851 TRPT1Q86TN4 253 aaKnown RBP10.74□□□□□ -0.69
C9orf47-203ENST00000375851 MEGF9Q9H1U4 602 aa10.74□□□□□ -0.69
C9orf47-203ENST00000375851 IGHV1OR15-1A0A075B7D0 117 aa10.74□□□□□ -0.69
C9orf47-203ENST00000375851 IGHV7-4-1A0A0J9YVY3 117 aa10.74□□□□□ -0.69
C9orf47-203ENST00000375851 CDKN1BP46527 198 aa10.74□□□□□ -0.69
C9orf47-203ENST00000375851 TRAV12-2A0A075B6T6 113 aa10.74□□□□□ -0.69
C9orf47-203ENST00000375851 TRAV13-1A0A0B4J241 112 aa10.74□□□□□ -0.69
C9orf47-203ENST00000375851 HLA-DMBP28068 263 aa10.74□□□□□ -0.69
C9orf47-203ENST00000375851 TMEM86BQ8N661 226 aa10.74□□□□□ -0.69
C9orf47-203ENST00000375851 ERG28Q9UKR5 140 aa10.74□□□□□ -0.69
C9orf47-203ENST00000375851 PCP4P48539 62 aa10.74□□□□□ -0.69
C9orf47-203ENST00000375851 C2orf66Q6UXQ4 117 aa10.74□□□□□ -0.69
C9orf47-203ENST00000375851 RITA1Q96K30 269 aa10.74□□□□□ -0.69
C9orf47-203ENST00000375851 MED12LQ86YW9 2145 aa10.74□□□□□ -0.69
C9orf47-203ENST00000375851 ZNF106Q9H2Y7 1883 aaKnown RBP10.73□□□□□ -0.69
C9orf47-203ENST00000375851 ABCA2Q9BZC7 2435 aa10.73□□□□□ -0.69
C9orf47-203ENST00000375851 RHODO00212 210 aa10.73□□□□□ -0.69
C9orf47-203ENST00000375851 K7EN84 100 aa10.73□□□□□ -0.69
C9orf47-203ENST00000375851 IGKV1-17P01599 117 aa10.73□□□□□ -0.69
C9orf47-203ENST00000375851 PLA2G2EQ9NZK7 142 aa10.73□□□□□ -0.69
C9orf47-203ENST00000375851 POLR3KQ9Y2Y1 108 aaPredicted RBP10.73□□□□□ -0.69
C9orf47-203ENST00000375851 HIVEP3Q5T1R4 2406 aa10.73□□□□□ -0.69
C9orf47-203ENST00000375851 IGHV7-81A0A0B4J1V7 117 aa10.73□□□□□ -0.69
C9orf47-203ENST00000375851 Q8NA96 180 aa10.73□□□□□ -0.69
C9orf47-203ENST00000375851 LY6G5BQ8NDX9 201 aa10.73□□□□□ -0.69
C9orf47-203ENST00000375851 IGHV4-30-2A0A087WSY4 118 aa10.72□□□□□ -0.69
C9orf47-203ENST00000375851 K7EIM0 57 aa10.72□□□□□ -0.69
C9orf47-203ENST00000375851 CKS1BP61024 79 aa10.72□□□□□ -0.69
C9orf47-203ENST00000375851 NPC2P61916 151 aa10.72□□□□□ -0.69
C9orf47-203ENST00000375851 Q8N8P6 123 aa10.72□□□□□ -0.69
C9orf47-203ENST00000375851 RASL10AQ92737 203 aa10.72□□□□□ -0.69
C9orf47-203ENST00000375851 SPXQ9BT56 116 aa10.72□□□□□ -0.69
C9orf47-203ENST00000375851 TP53TG1Q9Y2A0 90 aa10.72□□□□□ -0.69
C9orf47-203ENST00000375851 H3BUA1 57 aa10.72□□□□□ -0.69
C9orf47-203ENST00000375851 M0R2P5 195 aa10.71□□□□□ -0.69
C9orf47-203ENST00000375851 LTAP01374 205 aa10.71□□□□□ -0.69
C9orf47-203ENST00000375851 AGPAT4-IT1Q9H0P7 198 aa10.71□□□□□ -0.69
C9orf47-203ENST00000375851 SDHAF1A6NFY7 115 aa10.71□□□□□ -0.69
C9orf47-203ENST00000375851 C3orf56Q8N813 242 aa10.71□□□□□ -0.69
C9orf47-203ENST00000375851 C20orf144Q9BQM9 153 aa10.71□□□□□ -0.69
C9orf47-203ENST00000375851 NAV3Q8IVL0 2385 aa10.71□□□□□ -0.7
C9orf47-203ENST00000375851 C2CD3Q4AC94 2353 aa10.71□□□□□ -0.7
C9orf47-203ENST00000375851 TRAV8-2A0A0B4J237 113 aa10.71□□□□□ -0.7
C9orf47-203ENST00000375851 TRAV26-2A0A0B4J265 109 aa10.71□□□□□ -0.7
C9orf47-203ENST00000375851 I3L2K1 104 aa10.71□□□□□ -0.7
C9orf47-203ENST00000375851 IGLV1-47P01700 117 aa10.71□□□□□ -0.7
C9orf47-203ENST00000375851 PRB1P04280 392 aa10.71□□□□□ -0.7
C9orf47-203ENST00000375851 Q6ZWC4 215 aa10.71□□□□□ -0.7
C9orf47-203ENST00000375851 IGHV3-16A0A0C4DH30 117 aa10.7□□□□□ -0.7
C9orf47-203ENST00000375851 Q71RC1 249 aaPredicted RBP10.7□□□□□ -0.7
C9orf47-203ENST00000375851 NPBQ8NG41 125 aa10.7□□□□□ -0.7
C9orf47-203ENST00000375851 VPREB3Q9UKI3 123 aa10.7□□□□□ -0.7
C9orf47-203ENST00000375851 TMEM131Q92545 1883 aa10.7□□□□□ -0.7
C9orf47-203ENST00000375851 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.7□□□□□ -0.7
C9orf47-203ENST00000375851 NDUFS6O75380 124 aaKnown RBP10.7□□□□□ -0.7
C9orf47-203ENST00000375851 TSPAN13O95857 204 aa10.7□□□□□ -0.7
C9orf47-203ENST00000375851 IGLV2-14P01704 120 aa10.7□□□□□ -0.7
C9orf47-203ENST00000375851 IGHV4-38-2P0DP08 117 aa10.7□□□□□ -0.7
C9orf47-203ENST00000375851 DYNAPQ8N1N2 210 aa10.7□□□□□ -0.7
C9orf47-203ENST00000375851 C11orf68Q9H3H3 251 aaKnown RBP10.7□□□□□ -0.7
C9orf47-203ENST00000375851 F6UB75 175 aa10.7□□□□□ -0.7
C9orf47-203ENST00000375851 DEFB121Q5J5C9 76 aa10.7□□□□□ -0.7
C9orf47-203ENST00000375851 BLCAPP62952 87 aa10.7□□□□□ -0.7
C9orf47-203ENST00000375851 PATE2Q6UY27 113 aa10.7□□□□□ -0.7
C9orf47-203ENST00000375851 NPYP01303 97 aa10.69□□□□□ -0.7
C9orf47-203ENST00000375851 C6orf226Q5I0X4 101 aa10.69□□□□□ -0.7
C9orf47-203ENST00000375851 MORN5Q5VZ52 161 aa10.69□□□□□ -0.7
C9orf47-203ENST00000375851 TIMM21Q9BVV7 248 aa10.69□□□□□ -0.7
C9orf47-203ENST00000375851 SIGLEC8Q9NYZ4 499 aa10.69□□□□□ -0.7
C9orf47-203ENST00000375851 A8MWV9 139 aa10.69□□□□□ -0.7
C9orf47-203ENST00000375851 IGLV11-55A0A075B6I3 123 aa10.69□□□□□ -0.7
C9orf47-203ENST00000375851 PAX4O43316 350 aa10.69□□□□□ -0.7
C9orf47-203ENST00000375851 SLC25A20O43772 301 aa10.69□□□□□ -0.7
C9orf47-203ENST00000375851 TMEM95Q3KNT9 176 aa10.69□□□□□ -0.7
C9orf47-203ENST00000375851 GAGE13Q4V321 117 aa10.69□□□□□ -0.7
C9orf47-203ENST00000375851 GAGE12JA6NER3 117 aa10.69□□□□□ -0.7
C9orf47-203ENST00000375851 ESDP10768 282 aa10.69□□□□□ -0.7
C9orf47-203ENST00000375851 GAGE1Q13065 139 aa10.69□□□□□ -0.7
C9orf47-203ENST00000375851 GAGE4Q13068 117 aa10.69□□□□□ -0.7
C9orf47-203ENST00000375851 GAGE5Q13069 117 aa10.69□□□□□ -0.7
C9orf47-203ENST00000375851 SORL1Q92673 2214 aa10.69□□□□□ -0.7
C9orf47-203ENST00000375851 IGHV1-24A0A0C4DH33 117 aa10.68□□□□□ -0.7
C9orf47-203ENST00000375851 CFHR3Q02985 330 aa10.68□□□□□ -0.7
C9orf47-203ENST00000375851 FBXL19-AS1Q494R0 122 aa10.68□□□□□ -0.7
C9orf47-203ENST00000375851 CHAC1Q9BUX1 264 aa10.68□□□□□ -0.7
C9orf47-203ENST00000375851 DLEU1O43261 78 aa10.68□□□□□ -0.7
C9orf47-203ENST00000375851 ODF3L1Q8IXM7 274 aa10.68□□□□□ -0.7
C9orf47-203ENST00000375851 NACAE9PAV3 2078 aa10.68□□□□□ -0.7
C9orf47-203ENST00000375851 COL4A4P53420 1690 aaPredicted RBP10.68□□□□□ -0.7
C9orf47-203ENST00000375851 CTSGP08311 255 aa10.68□□□□□ -0.7
C9orf47-203ENST00000375851 KIR3DS1Q14943 382 aa10.68□□□□□ -0.7
C9orf47-203ENST00000375851 PRIMA1Q86XR5 153 aa10.68□□□□□ -0.7
C9orf47-203ENST00000375851 C10orf105Q8TEF2 133 aa10.68□□□□□ -0.7
C9orf47-203ENST00000375851 NCKAP5O14513 1909 aa10.68□□□□□ -0.7
C9orf47-203ENST00000375851 EGR2P11161 476 aaPredicted RBP10.68□□□□□ -0.7
C9orf47-203ENST00000375851 Q8N9W7 124 aa10.68□□□□□ -0.7
C9orf47-203ENST00000375851 ARHGAP21Q5T5U3 1957 aa10.67□□□□□ -0.7
C9orf47-203ENST00000375851 CHD3Q12873 2000 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms