RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 DKK4Q9UBT3 224 aa10.9□□□□□ -0.67
COL4A1-201ENST00000375820 IGLV10-54A0A075B6I4 117 aa10.89□□□□□ -0.67
COL4A1-201ENST00000375820 H3BMG7 143 aa10.89□□□□□ -0.67
COL4A1-201ENST00000375820 RHODO00212 210 aa10.89□□□□□ -0.67
COL4A1-201ENST00000375820 ZNF134P52741 427 aa10.89□□□□□ -0.67
COL4A1-201ENST00000375820 WT1-ASQ06250 92 aa10.89□□□□□ -0.67
COL4A1-201ENST00000375820 FOXE3Q13461 319 aa10.89□□□□□ -0.67
COL4A1-201ENST00000375820 LOXP28300 417 aaPredicted RBP10.88□□□□□ -0.67
COL4A1-201ENST00000375820 K7ENP7 123 aa10.88□□□□□ -0.67
COL4A1-201ENST00000375820 SMIM2Q9BVW6 85 aa10.88□□□□□ -0.67
COL4A1-201ENST00000375820 C9orf118A6NHY6 69 aa10.88□□□□□ -0.67
COL4A1-201ENST00000375820 H3BRN7 92 aa10.88□□□□□ -0.67
COL4A1-201ENST00000375820 NPSP0C0P6 89 aa10.88□□□□□ -0.67
COL4A1-201ENST00000375820 ZNF492Q9P255 531 aa10.88□□□□□ -0.67
COL4A1-201ENST00000375820 K7EMI3 77 aa10.88□□□□□ -0.67
COL4A1-201ENST00000375820 LYL1P12980 280 aa10.88□□□□□ -0.67
COL4A1-201ENST00000375820 YPEL3P61236 119 aaPredicted RBP10.88□□□□□ -0.67
COL4A1-201ENST00000375820 CEND1Q8N111 149 aa10.88□□□□□ -0.67
COL4A1-201ENST00000375820 CFHR4Q92496 578 aa10.88□□□□□ -0.67
COL4A1-201ENST00000375820 V9GYV3 84 aa10.87□□□□□ -0.67
COL4A1-201ENST00000375820 TCF20Q9UGU0 1960 aaKnown RBP10.87□□□□□ -0.67
COL4A1-201ENST00000375820 IGLV3-9A0A075B6K5 115 aa10.87□□□□□ -0.67
COL4A1-201ENST00000375820 A8MWP6 167 aa10.87□□□□□ -0.67
COL4A1-201ENST00000375820 C15orf53Q8NAA6 179 aa10.87□□□□□ -0.67
COL4A1-201ENST00000375820 MRPL52Q86TS9 123 aaKnown RBP10.87□□□□□ -0.67
COL4A1-201ENST00000375820 IGLL1P15814 213 aa10.87□□□□□ -0.67
COL4A1-201ENST00000375820 Q0VG73 95 aa10.87□□□□□ -0.67
COL4A1-201ENST00000375820 U3KQE9 123 aa10.87□□□□□ -0.67
COL4A1-201ENST00000375820 DOCK8Q8NF50 2099 aa10.86□□□□□ -0.67
COL4A1-201ENST00000375820 NDUFA4O00483 81 aa10.86□□□□□ -0.67
COL4A1-201ENST00000375820 IGHV4-59P01825 116 aa10.86□□□□□ -0.67
COL4A1-201ENST00000375820 GRNP28799 593 aaKnown RBP10.86□□□□□ -0.67
COL4A1-201ENST00000375820 CRYBA4P53673 196 aa10.86□□□□□ -0.67
COL4A1-201ENST00000375820 FHL1Q13642 323 aa10.86□□□□□ -0.67
COL4A1-201ENST00000375820 C5orf38Q86SI9 138 aa10.86□□□□□ -0.67
COL4A1-201ENST00000375820 IGHV3-30P01768 117 aa10.86□□□□□ -0.67
COL4A1-201ENST00000375820 IGHV3-33P01772 117 aa10.86□□□□□ -0.67
COL4A1-201ENST00000375820 IGHV3-30-3P0DP02 117 aa10.86□□□□□ -0.67
COL4A1-201ENST00000375820 IGHV3-30-5P0DP03 117 aa10.86□□□□□ -0.67
COL4A1-201ENST00000375820 INAFM2P0DMQ5 153 aa10.86□□□□□ -0.67
COL4A1-201ENST00000375820 IGLC2P0DOY2 106 aa10.86□□□□□ -0.67
COL4A1-201ENST00000375820 IGLC3P0DOY3 106 aa10.86□□□□□ -0.67
COL4A1-201ENST00000375820 Q6ZVH6 145 aa10.86□□□□□ -0.67
COL4A1-201ENST00000375820 ZMAT4Q9H898 229 aa10.86□□□□□ -0.67
COL4A1-201ENST00000375820 NCOR1O75376 2440 aa10.85□□□□□ -0.67
COL4A1-201ENST00000375820 GATA1P15976 413 aaPredicted RBP10.85□□□□□ -0.67
COL4A1-201ENST00000375820 TIMM17AQ99595 171 aa10.85□□□□□ -0.67
COL4A1-201ENST00000375820 FNDC10F2Z333 226 aa10.85□□□□□ -0.67
COL4A1-201ENST00000375820 IGHV7-4-1A0A0J9YVY3 117 aa10.85□□□□□ -0.67
COL4A1-201ENST00000375820 SMIM27A0A1W2PRY6 76 aa10.85□□□□□ -0.67
COL4A1-201ENST00000375820 TRACP01848 142 aa10.85□□□□□ -0.67
COL4A1-201ENST00000375820 IFITM1P13164 125 aa10.85□□□□□ -0.67
COL4A1-201ENST00000375820 NBL1P41271 181 aa10.85□□□□□ -0.67
COL4A1-201ENST00000375820 BOD1L2Q8IYS8 172 aa10.85□□□□□ -0.67
COL4A1-201ENST00000375820 DYNAPQ8N1N2 210 aa10.85□□□□□ -0.67
COL4A1-201ENST00000375820 ZNF524Q96C55 264 aa10.84□□□□□ -0.67
COL4A1-201ENST00000375820 PRO1854Q9UHT4 67 aa10.84□□□□□ -0.67
COL4A1-201ENST00000375820 SHISA9B4DS77 424 aa10.84□□□□□ -0.67
COL4A1-201ENST00000375820 E9PQ18 207 aa10.84□□□□□ -0.67
COL4A1-201ENST00000375820 J3QQQ9 107 aa10.84□□□□□ -0.67
COL4A1-201ENST00000375820 SLURP1P55000 103 aa10.84□□□□□ -0.67
COL4A1-201ENST00000375820 BVES-AS1Q5T3Y7 98 aa10.84□□□□□ -0.67
COL4A1-201ENST00000375820 DEFB112Q30KQ8 113 aa10.84□□□□□ -0.67
COL4A1-201ENST00000375820 Q6ZS49 121 aa10.84□□□□□ -0.67
COL4A1-201ENST00000375820 DYSFO75923 2080 aa10.84□□□□□ -0.67
COL4A1-201ENST00000375820 GREB1LQ9C091 1923 aaPredicted RBP10.84□□□□□ -0.67
COL4A1-201ENST00000375820 VOPP1Q96AW1 172 aa10.84□□□□□ -0.67
COL4A1-201ENST00000375820 USF3Q68DE3 2245 aa10.84□□□□□ -0.67
COL4A1-201ENST00000375820 GATA3P23771 443 aa10.84□□□□□ -0.67
COL4A1-201ENST00000375820 FOXL2NBQ6ZUU3 175 aa10.84□□□□□ -0.67
COL4A1-201ENST00000375820 PPDPFLQ8WWR9 84 aa10.83□□□□□ -0.68
COL4A1-201ENST00000375820 FXYD5Q96DB9 178 aa10.83□□□□□ -0.68
COL4A1-201ENST00000375820 SPRNQ5BIV9 151 aa10.83□□□□□ -0.68
COL4A1-201ENST00000375820 Q9H8V8 135 aa10.83□□□□□ -0.68
COL4A1-201ENST00000375820 HOXB4P17483 251 aaPredicted RBP10.83□□□□□ -0.68
COL4A1-201ENST00000375820 KMT2EQ8IZD2 1858 aa10.83□□□□□ -0.68
COL4A1-201ENST00000375820 BUB3O43684 328 aa10.82□□□□□ -0.68
COL4A1-201ENST00000375820 OR11H6Q8NGC7 330 aa10.82□□□□□ -0.68
COL4A1-201ENST00000375820 NRGNQ92686 78 aa10.82□□□□□ -0.68
COL4A1-201ENST00000375820 MRPL53Q96EL3 112 aaKnown RBP10.82□□□□□ -0.68
COL4A1-201ENST00000375820 PROK2Q9HC23 129 aa10.82□□□□□ -0.68
COL4A1-201ENST00000375820 CNOT1A5YKK6 2376 aaKnown RBP10.82□□□□□ -0.68
COL4A1-201ENST00000375820 HERVK_113P63121 156 aa10.82□□□□□ -0.68
COL4A1-201ENST00000375820 COX8AP10176 69 aa10.82□□□□□ -0.68
COL4A1-201ENST00000375820 WIPF2Q8TF74 440 aaPredicted RBP10.82□□□□□ -0.68
COL4A1-201ENST00000375820 CACNA1BQ00975 2339 aa10.82□□□□□ -0.68
COL4A1-201ENST00000375820 TRPM7Q96QT4 1865 aa10.82□□□□□ -0.68
COL4A1-201ENST00000375820 A0A1W2PPM0 123 aa10.82□□□□□ -0.68
COL4A1-201ENST00000375820 J3QKU1 62 aa10.82□□□□□ -0.68
COL4A1-201ENST00000375820 K7EN84 100 aa10.82□□□□□ -0.68
COL4A1-201ENST00000375820 ROS1P08922 2347 aa10.81□□□□□ -0.68
COL4A1-201ENST00000375820 TRBV20-1A0A075B6N2 111 aa10.81□□□□□ -0.68
COL4A1-201ENST00000375820 K7EP13 123 aa10.81□□□□□ -0.68
COL4A1-201ENST00000375820 TMEM190Q8WZ59 177 aa10.81□□□□□ -0.68
COL4A1-201ENST00000375820 TRAV13-2A0A0B4J235 113 aa10.81□□□□□ -0.68
COL4A1-201ENST00000375820 K7EP34 96 aa10.81□□□□□ -0.68
COL4A1-201ENST00000375820 DEFB4AO15263 64 aa10.81□□□□□ -0.68
COL4A1-201ENST00000375820 RBM3P98179 157 aaKnown RBP10.81□□□□□ -0.68
COL4A1-201ENST00000375820 NTN5Q8WTR8 489 aaPredicted RBP10.81□□□□□ -0.68
COL4A1-201ENST00000375820 RMI2Q96E14 147 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms