RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 GTF2H5Q6ZYL4 71 aa11.73□□□□□ -0.53
MSH5-203ENST00000375750 SMIM15Q7Z3B0 74 aa11.73□□□□□ -0.53
MSH5-203ENST00000375750 DOPEY1Q5JWR5 2465 aa11.72□□□□□ -0.53
MSH5-203ENST00000375750 TRGV3P03979 118 aa11.72□□□□□ -0.53
MSH5-203ENST00000375750 ZNF843Q8N446 348 aa11.72□□□□□ -0.53
MSH5-203ENST00000375750 DPF1Q92782 380 aa11.72□□□□□ -0.53
MSH5-203ENST00000375750 PSMG3-AS1Q96PY0 264 aa11.72□□□□□ -0.53
MSH5-203ENST00000375750 BPESC1Q9GZL8 116 aa11.72□□□□□ -0.53
MSH5-203ENST00000375750 SPCS1Q9Y6A9 102 aa11.72□□□□□ -0.53
MSH5-203ENST00000375750 NDUFA3O95167 84 aa11.72□□□□□ -0.53
MSH5-203ENST00000375750 TNFRSF6BO95407 300 aa11.72□□□□□ -0.53
MSH5-203ENST00000375750 RNF5Q99942 180 aa11.72□□□□□ -0.53
MSH5-203ENST00000375750 C11orf21Q9P2W6 132 aa11.72□□□□□ -0.53
MSH5-203ENST00000375750 A0A1W2PPM0 123 aa11.71□□□□□ -0.53
MSH5-203ENST00000375750 ZNF207O43670 478 aaKnown RBP11.71□□□□□ -0.53
MSH5-203ENST00000375750 TMEM11P17152 192 aa11.71□□□□□ -0.53
MSH5-203ENST00000375750 ODF1Q14990 250 aa11.71□□□□□ -0.53
MSH5-203ENST00000375750 NPBQ8NG41 125 aa11.71□□□□□ -0.53
MSH5-203ENST00000375750 OR9G4Q8NGQ1 327 aa11.71□□□□□ -0.53
MSH5-203ENST00000375750 TMEM158Q8WZ71 300 aa11.71□□□□□ -0.53
MSH5-203ENST00000375750 FOXC2Q99958 501 aa11.71□□□□□ -0.53
MSH5-203ENST00000375750 MAP1LC3AQ9H492 121 aa11.71□□□□□ -0.53
MSH5-203ENST00000375750 HHLA3Q9XRX5 114 aa11.71□□□□□ -0.53
MSH5-203ENST00000375750 RPL7P18124 248 aaKnown RBP11.71□□□□□ -0.54
MSH5-203ENST00000375750 ZNF562Q6V9R5 426 aa11.71□□□□□ -0.54
MSH5-203ENST00000375750 SRSF8Q9BRL6 282 aaKnown RBP11.71□□□□□ -0.54
MSH5-203ENST00000375750 FBLL1A6NHQ2 334 aaKnown RBP11.7□□□□□ -0.54
MSH5-203ENST00000375750 IGHV4-39P01824 125 aa11.7□□□□□ -0.54
MSH5-203ENST00000375750 OR4X2Q8NGF9 303 aa11.7□□□□□ -0.54
MSH5-203ENST00000375750 CELSR1Q9NYQ6 3014 aa11.69□□□□□ -0.54
MSH5-203ENST00000375750 G3V4G9 280 aa11.69□□□□□ -0.54
MSH5-203ENST00000375750 TMEM160Q9NX00 188 aa11.69□□□□□ -0.54
MSH5-203ENST00000375750 BMI1P35226 326 aa11.68□□□□□ -0.54
MSH5-203ENST00000375750 OR11H6Q8NGC7 330 aa11.68□□□□□ -0.54
MSH5-203ENST00000375750 IGKV3D-20A0A0C4DH25 116 aa11.68□□□□□ -0.54
MSH5-203ENST00000375750 M0R1W7 72 aa11.68□□□□□ -0.54
MSH5-203ENST00000375750 SAMD5Q5TGI4 173 aa11.68□□□□□ -0.54
MSH5-203ENST00000375750 VMO1Q7Z5L0 202 aa11.68□□□□□ -0.54
MSH5-203ENST00000375750 TTC9CQ8N5M4 171 aa11.68□□□□□ -0.54
MSH5-203ENST00000375750 MAPKAPK5-AS1Q8N8E1 139 aa11.68□□□□□ -0.54
MSH5-203ENST00000375750 SPG11Q96JI7 2443 aa11.68□□□□□ -0.54
MSH5-203ENST00000375750 TRAV40A0A0B4J280 105 aa11.67□□□□□ -0.54
MSH5-203ENST00000375750 FABP5P3A8MUU1 101 aa11.67□□□□□ -0.54
MSH5-203ENST00000375750 PRTN3P24158 256 aa11.67□□□□□ -0.54
MSH5-203ENST00000375750 FCER1GP30273 86 aa11.67□□□□□ -0.54
MSH5-203ENST00000375750 ECSCRQ19T08 205 aa11.67□□□□□ -0.54
MSH5-203ENST00000375750 ZC2HC1BQ5TFG8 222 aa11.67□□□□□ -0.54
MSH5-203ENST00000375750 CCL19Q99731 98 aa11.67□□□□□ -0.54
MSH5-203ENST00000375750 CHAC1Q9BUX1 264 aa11.67□□□□□ -0.54
MSH5-203ENST00000375750 NPFFR1Q9GZQ6 430 aa11.67□□□□□ -0.54
MSH5-203ENST00000375750 AGRNO00468 2067 aa11.67□□□□□ -0.54
MSH5-203ENST00000375750 J3KRW8 73 aa11.67□□□□□ -0.54
MSH5-203ENST00000375750 MAP1AP78559 2803 aaPredicted RBP11.67□□□□□ -0.54
MSH5-203ENST00000375750 LINC01548A6NM66 108 aa11.67□□□□□ -0.54
MSH5-203ENST00000375750 SIVA1O15304 175 aa11.67□□□□□ -0.54
MSH5-203ENST00000375750 GOSR1O95249 250 aa11.67□□□□□ -0.54
MSH5-203ENST00000375750 SMIM13P0DJ93 91 aa11.67□□□□□ -0.54
MSH5-203ENST00000375750 LMO4P61968 165 aa11.67□□□□□ -0.54
MSH5-203ENST00000375750 RPL24P83731 157 aaKnown RBP11.67□□□□□ -0.54
MSH5-203ENST00000375750 COX8CQ7Z4L0 72 aa11.67□□□□□ -0.54
MSH5-203ENST00000375750 NHP2Q9NX24 153 aaKnown RBP11.67□□□□□ -0.54
MSH5-203ENST00000375750 TRBV25-1A0A075B6N4 114 aa11.66□□□□□ -0.54
MSH5-203ENST00000375750 IGHV7-81A0A0B4J1V7 117 aa11.66□□□□□ -0.54
MSH5-203ENST00000375750 IGKCP01834 107 aa11.66□□□□□ -0.54
MSH5-203ENST00000375750 CLEC3BP05452 202 aa11.66□□□□□ -0.54
MSH5-203ENST00000375750 SRSF1Q07955 248 aaKnown RBP eCLIP11.66□□□□□ -0.547e-7■■■□□ 15.3
MSH5-203ENST00000375750 NEGR1Q7Z3B1 354 aa11.66□□□□□ -0.54
MSH5-203ENST00000375750 NRGNQ92686 78 aa11.66□□□□□ -0.54
MSH5-203ENST00000375750 UFC1Q9Y3C8 167 aa11.66□□□□□ -0.54
MSH5-203ENST00000375750 C15orf32Q32M92 178 aa11.66□□□□□ -0.54
MSH5-203ENST00000375750 AGPAT4-IT1Q9H0P7 198 aa11.66□□□□□ -0.54
MSH5-203ENST00000375750 MRPL35Q9NZE8 188 aaKnown RBP11.66□□□□□ -0.54
MSH5-203ENST00000375750 CELSR2Q9HCU4 2923 aa11.65□□□□□ -0.54
MSH5-203ENST00000375750 ODF3BA8MYP8 253 aa11.65□□□□□ -0.54
MSH5-203ENST00000375750 FABP2P12104 132 aa11.65□□□□□ -0.54
MSH5-203ENST00000375750 CEACAM3P40198 252 aa11.65□□□□□ -0.54
MSH5-203ENST00000375750 MTURNQ8N3F0 131 aa11.65□□□□□ -0.54
MSH5-203ENST00000375750 ZMAT4Q9H898 229 aa11.65□□□□□ -0.54
MSH5-203ENST00000375750 SMIM17P0DL12 118 aa11.65□□□□□ -0.54
MSH5-203ENST00000375750 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.65□□□□□ -0.54
MSH5-203ENST00000375750 G3V318 75 aa11.64□□□□□ -0.55
MSH5-203ENST00000375750 IGF1P05019 195 aa11.64□□□□□ -0.55
MSH5-203ENST00000375750 KLK15Q9H2R5 256 aa11.64□□□□□ -0.55
MSH5-203ENST00000375750 IGLV2-18A0A075B6J9 118 aa11.63□□□□□ -0.55
MSH5-203ENST00000375750 TEX48A0A1B0GUV7 120 aa11.63□□□□□ -0.55
MSH5-203ENST00000375750 DEFB1P60022 68 aa11.63□□□□□ -0.55
MSH5-203ENST00000375750 CLEC19AQ6UXS0 136 aa11.63□□□□□ -0.55
MSH5-203ENST00000375750 LCNL1Q6ZST4 164 aa11.63□□□□□ -0.55
MSH5-203ENST00000375750 S100A7AQ86SG5 101 aa11.63□□□□□ -0.55
MSH5-203ENST00000375750 DEFB104AQ8WTQ1 72 aa11.63□□□□□ -0.55
MSH5-203ENST00000375750 SPOCK3Q9BQ16 436 aa11.63□□□□□ -0.55
MSH5-203ENST00000375750 FAM208BQ5VWN6 2430 aa11.63□□□□□ -0.55
MSH5-203ENST00000375750 TMEM238C9JI98 176 aa11.63□□□□□ -0.55
MSH5-203ENST00000375750 C1orf122Q6ZSJ8 110 aa11.63□□□□□ -0.55
MSH5-203ENST00000375750 ZNF48Q96MX3 618 aaPredicted RBP11.63□□□□□ -0.55
MSH5-203ENST00000375750 SIRPDQ9H106 197 aa11.63□□□□□ -0.55
MSH5-203ENST00000375750 BUB3O43684 328 aa11.62□□□□□ -0.55
MSH5-203ENST00000375750 PHLDA1Q8WV24 401 aaPredicted RBP11.62□□□□□ -0.55
MSH5-203ENST00000375750 NXT2Q9NPJ8 142 aaKnown RBP11.62□□□□□ -0.55
MSH5-203ENST00000375750 CLPSL1A2RUU4 121 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms