RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 APLNQ9ULZ1 77 aa11.32□□□□□ -0.6
C11orf88-202ENST00000375618 ZNF493Q6ZR52 646 aa11.31□□□□□ -0.6
C11orf88-202ENST00000375618 C11orf72Q8NBR9 251 aa11.31□□□□□ -0.6
C11orf88-202ENST00000375618 FAM213BQ8TBF2 198 aa11.31□□□□□ -0.6
C11orf88-202ENST00000375618 LINC00467Q9BRT7 94 aa11.31□□□□□ -0.6
C11orf88-202ENST00000375618 NOP10Q9NPE3 64 aaKnown RBP11.31□□□□□ -0.6
C11orf88-202ENST00000375618 EPDR1Q9UM22 224 aa11.31□□□□□ -0.6
C11orf88-202ENST00000375618 IGHV4-4A0A075B6R2 117 aa11.3□□□□□ -0.6
C11orf88-202ENST00000375618 TEX48A0A1B0GUV7 120 aa11.3□□□□□ -0.6
C11orf88-202ENST00000375618 A0A1W2PRE2 83 aa11.3□□□□□ -0.6
C11orf88-202ENST00000375618 FAM74A7A6NL05 159 aa11.3□□□□□ -0.6
C11orf88-202ENST00000375618 LYRM9A8MSI8 78 aa11.3□□□□□ -0.6
C11orf88-202ENST00000375618 F6UZH7 168 aa11.3□□□□□ -0.6
C11orf88-202ENST00000375618 DEFB130BP0DP73 79 aa11.3□□□□□ -0.6
C11orf88-202ENST00000375618 DEFB130AP0DP74 79 aa11.3□□□□□ -0.6
C11orf88-202ENST00000375618 TPT1P13693 172 aaKnown RBP11.3□□□□□ -0.6
C11orf88-202ENST00000375618 DAD1P61803 113 aa11.3□□□□□ -0.6
C11orf88-202ENST00000375618 C9orf62Q8N4C0 152 aa11.3□□□□□ -0.6
C11orf88-202ENST00000375618 MBD3L1Q8WWY6 194 aa11.3□□□□□ -0.6
C11orf88-202ENST00000375618 LINC00479Q96M42 142 aa11.3□□□□□ -0.6
C11orf88-202ENST00000375618 LENEPQ9Y5L5 61 aa11.3□□□□□ -0.6
C11orf88-202ENST00000375618 HTN3P15516 51 aa11.29□□□□□ -0.6
C11orf88-202ENST00000375618 Q6AWC8 147 aa11.29□□□□□ -0.6
C11orf88-202ENST00000375618 CCDC28AQ8IWP9 274 aa11.29□□□□□ -0.6
C11orf88-202ENST00000375618 LINC00612Q8N6U2 182 aa11.29□□□□□ -0.6
C11orf88-202ENST00000375618 TIMM8BQ9Y5J9 83 aaPredicted RBP11.29□□□□□ -0.6
C11orf88-202ENST00000375618 A0A1B0GV50 99 aa11.28□□□□□ -0.6
C11orf88-202ENST00000375618 UMAD1C9J7I0 102 aa11.28□□□□□ -0.6
C11orf88-202ENST00000375618 ANXA2RQ3ZCQ2 193 aa11.28□□□□□ -0.6
C11orf88-202ENST00000375618 MUC21Q5SSG8 566 aa11.28□□□□□ -0.6
C11orf88-202ENST00000375618 EIF4E3Q8N5X7 224 aaKnown RBP11.28□□□□□ -0.6
C11orf88-202ENST00000375618 SFT2D1Q8WV19 159 aa11.28□□□□□ -0.6
C11orf88-202ENST00000375618 C8orf49Q96NF6 230 aa11.28□□□□□ -0.6
C11orf88-202ENST00000375618 GSN-AS1Q9NRJ2 163 aa11.28□□□□□ -0.6
C11orf88-202ENST00000375618 PSG8Q9UQ74 426 aa11.28□□□□□ -0.6
C11orf88-202ENST00000375618 KLF12Q9Y4X4 402 aa11.28□□□□□ -0.6
C11orf88-202ENST00000375618 IGHV1OR15-1A0A075B7D0 117 aa11.27□□□□□ -0.61
C11orf88-202ENST00000375618 TRAV34A0A0B4J273 112 aa11.27□□□□□ -0.61
C11orf88-202ENST00000375618 CBY3A6NI87 242 aa11.27□□□□□ -0.61
C11orf88-202ENST00000375618 RGS13O14921 159 aa11.27□□□□□ -0.61
C11orf88-202ENST00000375618 LY6G6CO95867 125 aa11.27□□□□□ -0.61
C11orf88-202ENST00000375618 ATP5G3P48201 142 aa11.27□□□□□ -0.61
C11orf88-202ENST00000375618 ZNF80P51504 273 aaPredicted RBP11.27□□□□□ -0.61
C11orf88-202ENST00000375618 EIF5AP63241 154 aaKnown RBP11.27□□□□□ -0.61
C11orf88-202ENST00000375618 CYB561D1Q8N8Q1 229 aa11.27□□□□□ -0.61
C11orf88-202ENST00000375618 ATG101Q9BSB4 218 aa11.27□□□□□ -0.61
C11orf88-202ENST00000375618 TREM1Q9NP99 234 aa11.27□□□□□ -0.61
C11orf88-202ENST00000375618 SERTM2A0A1B0GWG4 89 aa11.26□□□□□ -0.61
C11orf88-202ENST00000375618 CCL20P78556 96 aa11.26□□□□□ -0.61
C11orf88-202ENST00000375618 Q6ZTI0 123 aa11.26□□□□□ -0.61
C11orf88-202ENST00000375618 GAGE12BA1L429 117 aa11.25□□□□□ -0.61
C11orf88-202ENST00000375618 PEX7O00628 323 aa11.25□□□□□ -0.61
C11orf88-202ENST00000375618 GAGE7O76087 117 aa11.25□□□□□ -0.61
C11orf88-202ENST00000375618 IFNA7P01567 189 aa11.25□□□□□ -0.61
C11orf88-202ENST00000375618 GAGE12FP0CL80 117 aa11.25□□□□□ -0.61
C11orf88-202ENST00000375618 GAGE12GP0CL81 117 aa11.25□□□□□ -0.61
C11orf88-202ENST00000375618 GAGE12IP0CL82 117 aa11.25□□□□□ -0.61
C11orf88-202ENST00000375618 NKX2-5P52952 324 aaPredicted RBP11.25□□□□□ -0.61
C11orf88-202ENST00000375618 FLI1Q01543 452 aaPredicted RBP11.25□□□□□ -0.61
C11orf88-202ENST00000375618 DAZ2Q13117 558 aaKnown RBP11.25□□□□□ -0.61
C11orf88-202ENST00000375618 DPPA3Q6W0C5 159 aa11.25□□□□□ -0.61
C11orf88-202ENST00000375618 PRNTQ86SH4 94 aa11.25□□□□□ -0.61
C11orf88-202ENST00000375618 TMEM75Q8N9X5 138 aa11.25□□□□□ -0.61
C11orf88-202ENST00000375618 MDFICQ9P1T7 246 aa11.25□□□□□ -0.61
C11orf88-202ENST00000375618 C11orf21Q9P2W6 132 aa11.25□□□□□ -0.61
C11orf88-202ENST00000375618 SNURFLB1AK76 121 aa11.24□□□□□ -0.61
C11orf88-202ENST00000375618 PAGE4O60829 102 aa11.24□□□□□ -0.61
C11orf88-202ENST00000375618 H2AFB1P0C5Y9 115 aa11.24□□□□□ -0.61
C11orf88-202ENST00000375618 TCL1AP56279 114 aa11.24□□□□□ -0.61
C11orf88-202ENST00000375618 TCTAP57738 103 aa11.24□□□□□ -0.61
C11orf88-202ENST00000375618 ZFP69Q49AA0 526 aa11.24□□□□□ -0.61
C11orf88-202ENST00000375618 TMEM88Q6PEY1 159 aa11.24□□□□□ -0.61
C11orf88-202ENST00000375618 SLC51BQ86UW2 128 aa11.24□□□□□ -0.61
C11orf88-202ENST00000375618 ZNF680Q8NEM1 530 aa11.24□□□□□ -0.61
C11orf88-202ENST00000375618 GNRH2O43555 120 aa11.23□□□□□ -0.61
C11orf88-202ENST00000375618 SULT1A2P50226 295 aa11.23□□□□□ -0.61
C11orf88-202ENST00000375618 IBA57Q5T440 356 aaKnown RBP11.23□□□□□ -0.61
C11orf88-202ENST00000375618 CST9LP1Q5W188 147 aa11.23□□□□□ -0.61
C11orf88-202ENST00000375618 LGALS9CQ6DKI2 356 aa11.23□□□□□ -0.61
C11orf88-202ENST00000375618 NAGKQ9UJ70 344 aa11.23□□□□□ -0.61
C11orf88-202ENST00000375618 VPS13DQ5THJ4 4388 aa11.23□□□□□ -0.61
C11orf88-202ENST00000375618 K7EQM0 130 aa11.22□□□□□ -0.61
C11orf88-202ENST00000375618 SPINK4O60575 86 aa11.22□□□□□ -0.61
C11orf88-202ENST00000375618 ATP5G1P05496 136 aa11.22□□□□□ -0.61
C11orf88-202ENST00000375618 HOXA5P20719 270 aa11.22□□□□□ -0.61
C11orf88-202ENST00000375618 TMEM183BQ1AE95 376 aa11.22□□□□□ -0.61
C11orf88-202ENST00000375618 Q86TA4 180 aa11.22□□□□□ -0.61
C11orf88-202ENST00000375618 TMEM183AQ8IXX5 376 aa11.22□□□□□ -0.61
C11orf88-202ENST00000375618 NDUFAF3Q9BU61 184 aa11.22□□□□□ -0.61
C11orf88-202ENST00000375618 MRPL16Q9NX20 251 aaKnown RBP11.22□□□□□ -0.61
C11orf88-202ENST00000375618 BOLA1Q9Y3E2 137 aa11.22□□□□□ -0.61
C11orf88-202ENST00000375618 ARL2-SNX15V9GYD0 113 aa11.22□□□□□ -0.61
C11orf88-202ENST00000375618 TRGV1A0A0A0MS02 117 aa11.21□□□□□ -0.61
C11orf88-202ENST00000375618 TRAV21A0A0B4J279 112 aa11.21□□□□□ -0.61
C11orf88-202ENST00000375618 F5H768 121 aa11.21□□□□□ -0.61
C11orf88-202ENST00000375618 GCGP01275 180 aa11.21□□□□□ -0.61
C11orf88-202ENST00000375618 TDRG1Q3Y452 100 aa11.21□□□□□ -0.61
C11orf88-202ENST00000375618 HIST1H2BAQ96A08 127 aa11.21□□□□□ -0.61
C11orf88-202ENST00000375618 NDFIP1Q9BT67 221 aa11.21□□□□□ -0.61
C11orf88-202ENST00000375618 NKX6-2Q9C056 277 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms