RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 ZNF524Q96C55 264 aa11.72□□□□□ -0.53
NOTCH4-201ENST00000375023 TMEM243Q9BU79 118 aa11.72□□□□□ -0.53
NOTCH4-201ENST00000375023 NACAE9PAV3 2078 aa11.72□□□□□ -0.53
NOTCH4-201ENST00000375023 K7EM74 188 aa11.71□□□□□ -0.53
NOTCH4-201ENST00000375023 WDR81Q562E7 1941 aa11.71□□□□□ -0.53
NOTCH4-201ENST00000375023 ACACAQ13085 2346 aa11.71□□□□□ -0.53
NOTCH4-201ENST00000375023 SDHAF1A6NFY7 115 aa11.71□□□□□ -0.53
NOTCH4-201ENST00000375023 CCL18P55774 89 aa11.71□□□□□ -0.53
NOTCH4-201ENST00000375023 GP9P14770 177 aa11.71□□□□□ -0.54
NOTCH4-201ENST00000375023 NCOR1O75376 2440 aa11.71□□□□□ -0.54
NOTCH4-201ENST00000375023 K7ERJ3 54 aa11.71□□□□□ -0.54
NOTCH4-201ENST00000375023 RNF138Q8WVD3 245 aa11.71□□□□□ -0.54
NOTCH4-201ENST00000375023 FNDC1Q4ZHG4 1894 aaPredicted RBP11.71□□□□□ -0.54
NOTCH4-201ENST00000375023 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.71□□□□□ -0.54
NOTCH4-201ENST00000375023 IGKV2-29A2NJV5 120 aaPredicted RBP11.71□□□□□ -0.54
NOTCH4-201ENST00000375023 NDUFA4L2Q9NRX3 87 aa11.71□□□□□ -0.54
NOTCH4-201ENST00000375023 LYPD1Q8N2G4 141 aa11.7□□□□□ -0.54
NOTCH4-201ENST00000375023 FANCD2OSQ96PS1 177 aa11.7□□□□□ -0.54
NOTCH4-201ENST00000375023 ZNF134P52741 427 aa11.7□□□□□ -0.54
NOTCH4-201ENST00000375023 SPRNQ5BIV9 151 aa11.7□□□□□ -0.54
NOTCH4-201ENST00000375023 TMEM14BQ9NUH8 114 aa11.7□□□□□ -0.54
NOTCH4-201ENST00000375023 IGLV10-54A0A075B6I4 117 aa11.7□□□□□ -0.54
NOTCH4-201ENST00000375023 IGLV3-9A0A075B6K5 115 aa11.7□□□□□ -0.54
NOTCH4-201ENST00000375023 CDKN1BP46527 198 aa11.7□□□□□ -0.54
NOTCH4-201ENST00000375023 DNAJC30Q96LL9 226 aa11.7□□□□□ -0.54
NOTCH4-201ENST00000375023 TRAV1-1A0A0B4J248 108 aa11.69□□□□□ -0.54
NOTCH4-201ENST00000375023 CRLF1O75462 422 aa11.69□□□□□ -0.54
NOTCH4-201ENST00000375023 LOXP28300 417 aaPredicted RBP11.69□□□□□ -0.54
NOTCH4-201ENST00000375023 C9orf66Q5T8R8 295 aa11.69□□□□□ -0.54
NOTCH4-201ENST00000375023 FAM231BA6NCW3 169 aa11.69□□□□□ -0.54
NOTCH4-201ENST00000375023 SLURP1P55000 103 aa11.69□□□□□ -0.54
NOTCH4-201ENST00000375023 IGHV4-30-2A0A087WSY4 118 aa11.69□□□□□ -0.54
NOTCH4-201ENST00000375023 H3BMM0 161 aa11.69□□□□□ -0.54
NOTCH4-201ENST00000375023 SLAQ13239 276 aa11.69□□□□□ -0.54
NOTCH4-201ENST00000375023 UBE2WQ96B02 151 aa11.69□□□□□ -0.54
NOTCH4-201ENST00000375023 TRBV19A0A075B6N1 114 aa11.68□□□□□ -0.54
NOTCH4-201ENST00000375023 IGHV4-28A0A0C4DH34 117 aa11.68□□□□□ -0.54
NOTCH4-201ENST00000375023 ZNF833PQ6ZTB9 187 aa11.68□□□□□ -0.54
NOTCH4-201ENST00000375023 WFDC11Q8NEX6 87 aa11.68□□□□□ -0.54
NOTCH4-201ENST00000375023 CRYGCP07315 174 aa11.68□□□□□ -0.54
NOTCH4-201ENST00000375023 ZC2HC1AQ96GY0 325 aa11.68□□□□□ -0.54
NOTCH4-201ENST00000375023 PROK2Q9HC23 129 aa11.68□□□□□ -0.54
NOTCH4-201ENST00000375023 POLR3KQ9Y2Y1 108 aaPredicted RBP11.68□□□□□ -0.54
NOTCH4-201ENST00000375023 TRBV6-6A0A0A6YYG2 114 aa11.67□□□□□ -0.54
NOTCH4-201ENST00000375023 LINC01549A6NIU2 74 aa11.67□□□□□ -0.54
NOTCH4-201ENST00000375023 FOXE3Q13461 319 aa11.67□□□□□ -0.54
NOTCH4-201ENST00000375023 WT1-ASQ06250 92 aa11.67□□□□□ -0.54
NOTCH4-201ENST00000375023 Q8NFD4 153 aa11.67□□□□□ -0.54
NOTCH4-201ENST00000375023 CD5LO43866 347 aa11.67□□□□□ -0.54
NOTCH4-201ENST00000375023 LY6G6EA0A0G2JKS1 128 aa11.67□□□□□ -0.54
NOTCH4-201ENST00000375023 SOCS3O14543 225 aa11.67□□□□□ -0.54
NOTCH4-201ENST00000375023 GPHB5Q86YW7 130 aa11.67□□□□□ -0.54
NOTCH4-201ENST00000375023 U3KQA8 63 aa11.67□□□□□ -0.54
NOTCH4-201ENST00000375023 FGF6P10767 208 aa11.67□□□□□ -0.54
NOTCH4-201ENST00000375023 NBL1P41271 181 aa11.67□□□□□ -0.54
NOTCH4-201ENST00000375023 DLEU1O43261 78 aa11.66□□□□□ -0.54
NOTCH4-201ENST00000375023 ZNF726P1Q15940 193 aa11.66□□□□□ -0.54
NOTCH4-201ENST00000375023 FHL1Q13642 323 aa11.66□□□□□ -0.54
NOTCH4-201ENST00000375023 C18orf32Q8TCD1 76 aa11.66□□□□□ -0.54
NOTCH4-201ENST00000375023 IGHV1-24A0A0C4DH33 117 aa11.66□□□□□ -0.54
NOTCH4-201ENST00000375023 PRSS46E5RG02 174 aa11.66□□□□□ -0.54
NOTCH4-201ENST00000375023 ZNF124Q15973 351 aa11.66□□□□□ -0.54
NOTCH4-201ENST00000375023 FAM104BQ5XKR9 115 aa11.66□□□□□ -0.54
NOTCH4-201ENST00000375023 FAM110AQ9BQ89 295 aa11.66□□□□□ -0.54
NOTCH4-201ENST00000375023 IGLV2-18A0A075B6J9 118 aa11.66□□□□□ -0.54
NOTCH4-201ENST00000375023 HOXB4P17483 251 aaPredicted RBP11.66□□□□□ -0.54
NOTCH4-201ENST00000375023 FRMPD3Q5JV73 1810 aa11.66□□□□□ -0.54
NOTCH4-201ENST00000375023 MAJINQ3KP22 176 aa11.65□□□□□ -0.54
NOTCH4-201ENST00000375023 NPYP01303 97 aa11.65□□□□□ -0.54
NOTCH4-201ENST00000375023 TIRAPP58753 221 aa11.65□□□□□ -0.54
NOTCH4-201ENST00000375023 GATA3P23771 443 aa11.65□□□□□ -0.54
NOTCH4-201ENST00000375023 KLF2Q9Y5W3 355 aaPredicted RBP11.65□□□□□ -0.54
NOTCH4-201ENST00000375023 U3KQE9 123 aa11.65□□□□□ -0.54
NOTCH4-201ENST00000375023 SMIM2Q9BVW6 85 aa11.65□□□□□ -0.55
NOTCH4-201ENST00000375023 A0A1B0GW64 132 aa11.64□□□□□ -0.55
NOTCH4-201ENST00000375023 Q8N8P6 123 aa11.64□□□□□ -0.55
NOTCH4-201ENST00000375023 ZNF503Q96F45 646 aa11.64□□□□□ -0.55
NOTCH4-201ENST00000375023 NDUFA12Q9UI09 145 aa11.64□□□□□ -0.55
NOTCH4-201ENST00000375023 NOTCH3Q9UM47 2321 aa11.64□□□□□ -0.55
NOTCH4-201ENST00000375023 HEATR5AQ86XA9 2040 aa11.64□□□□□ -0.55
NOTCH4-201ENST00000375023 K7EMI3 77 aa11.64□□□□□ -0.55
NOTCH4-201ENST00000375023 PRR25Q96S07 402 aa11.64□□□□□ -0.55
NOTCH4-201ENST00000375023 MRPL27Q9P0M9 148 aaKnown RBP11.64□□□□□ -0.55
NOTCH4-201ENST00000375023 C9orf153Q5TBE3 101 aa11.64□□□□□ -0.55
NOTCH4-201ENST00000375023 IGHV4-38-2P0DP08 117 aa11.64□□□□□ -0.55
NOTCH4-201ENST00000375023 MRPL35Q9NZE8 188 aaKnown RBP11.64□□□□□ -0.55
NOTCH4-201ENST00000375023 PDE6HQ13956 83 aa11.63□□□□□ -0.55
NOTCH4-201ENST00000375023 SIGLEC8Q9NYZ4 499 aa11.63□□□□□ -0.55
NOTCH4-201ENST00000375023 H3BRN7 92 aa11.63□□□□□ -0.55
NOTCH4-201ENST00000375023 C5orf38Q86SI9 138 aa11.63□□□□□ -0.55
NOTCH4-201ENST00000375023 SRSF8Q9BRL6 282 aaKnown RBP11.63□□□□□ -0.55
NOTCH4-201ENST00000375023 NDUFA4O00483 81 aa11.63□□□□□ -0.55
NOTCH4-201ENST00000375023 DEFB135Q30KP9 77 aa11.63□□□□□ -0.55
NOTCH4-201ENST00000375023 DSCR8Q96T75 97 aa11.63□□□□□ -0.55
NOTCH4-201ENST00000375023 UBE2V1Q13404 147 aa11.63□□□□□ -0.55
NOTCH4-201ENST00000375023 RITA1Q96K30 269 aa11.63□□□□□ -0.55
NOTCH4-201ENST00000375023 IGHV7-4-1A0A0J9YVY3 117 aa11.62□□□□□ -0.55
NOTCH4-201ENST00000375023 CFHR4Q92496 578 aa11.62□□□□□ -0.55
NOTCH4-201ENST00000375023 OVOL2Q9BRP0 275 aa11.62□□□□□ -0.55
NOTCH4-201ENST00000375023 DKK2Q9UBU2 259 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms