RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 OR2K2Q8NGT1 345 aa8.11□□□□□ -1.11
HLA-DQA1-202ENST00000374949 LINC00477Q96M19 166 aa8.11□□□□□ -1.11
HLA-DQA1-202ENST00000374949 SPAG8Q99932 426 aaPredicted RBP8.11□□□□□ -1.11
HLA-DQA1-202ENST00000374949 SMCO4Q9NRQ5 59 aa8.11□□□□□ -1.11
HLA-DQA1-202ENST00000374949 TMEM242Q9NWH2 141 aa8.11□□□□□ -1.11
HLA-DQA1-202ENST00000374949 OR4C46A6NHA9 309 aa8.1□□□□□ -1.11
HLA-DQA1-202ENST00000374949 A8MZ25 164 aa8.1□□□□□ -1.11
HLA-DQA1-202ENST00000374949 ZNF138P52744 262 aa8.1□□□□□ -1.11
HLA-DQA1-202ENST00000374949 ERVFC1-1P60608 527 aa8.1□□□□□ -1.11
HLA-DQA1-202ENST00000374949 BTN1A1Q13410 526 aa8.1□□□□□ -1.11
HLA-DQA1-202ENST00000374949 PSMG4Q5JS54 123 aa8.1□□□□□ -1.11
HLA-DQA1-202ENST00000374949 FAM24BQ8N5W8 94 aa8.1□□□□□ -1.11
HLA-DQA1-202ENST00000374949 C15orf54Q8N8G6 183 aa8.1□□□□□ -1.11
HLA-DQA1-202ENST00000374949 OR10G8Q8NGN5 311 aa8.1□□□□□ -1.11
HLA-DQA1-202ENST00000374949 SFRP2Q96HF1 295 aa8.1□□□□□ -1.11
HLA-DQA1-202ENST00000374949 NDFIP1Q9BT67 221 aa8.1□□□□□ -1.11
HLA-DQA1-202ENST00000374949 OSTCQ9NRP0 149 aa8.1□□□□□ -1.11
HLA-DQA1-202ENST00000374949 PPP1R14DQ9NXH3 145 aa8.1□□□□□ -1.11
HLA-DQA1-202ENST00000374949 CXorf65A6NEN9 183 aa8.09□□□□□ -1.11
HLA-DQA1-202ENST00000374949 NPIPB6E9PJ23 425 aa8.09□□□□□ -1.11
HLA-DQA1-202ENST00000374949 ZNF688P0C7X2 276 aa8.09□□□□□ -1.11
HLA-DQA1-202ENST00000374949 CMC4P56277 68 aaPredicted RBP8.09□□□□□ -1.11
HLA-DQA1-202ENST00000374949 EBLN2Q6P2I7 272 aa8.09□□□□□ -1.11
HLA-DQA1-202ENST00000374949 FAM231DQ6ZW35 169 aa8.09□□□□□ -1.11
HLA-DQA1-202ENST00000374949 COX8CQ7Z4L0 72 aa8.09□□□□□ -1.11
HLA-DQA1-202ENST00000374949 OR8A1Q8NGG7 326 aa8.09□□□□□ -1.11
HLA-DQA1-202ENST00000374949 DAZAP1Q96EP5 407 aaKnown RBP8.09□□□□□ -1.11
HLA-DQA1-202ENST00000374949 FAM110AQ9BQ89 295 aa8.09□□□□□ -1.11
HLA-DQA1-202ENST00000374949 KRTAP17-1Q9BYP8 105 aa8.09□□□□□ -1.11
HLA-DQA1-202ENST00000374949 TUBA4BQ9H853 241 aa8.09□□□□□ -1.11
HLA-DQA1-202ENST00000374949 ZNF492Q9P255 531 aa8.09□□□□□ -1.11
HLA-DQA1-202ENST00000374949 LENEPQ9Y5L5 61 aa8.09□□□□□ -1.11
HLA-DQA1-202ENST00000374949 ALMS1Q8TCU4 4167 aa8.09□□□□□ -1.11
HLA-DQA1-202ENST00000374949 IZUMO1RA6ND01 250 aa8.08□□□□□ -1.12
HLA-DQA1-202ENST00000374949 F6UB75 175 aa8.08□□□□□ -1.12
HLA-DQA1-202ENST00000374949 H7BYZ3 331 aa8.08□□□□□ -1.12
HLA-DQA1-202ENST00000374949 GATCO43716 136 aaKnown RBP8.08□□□□□ -1.12
HLA-DQA1-202ENST00000374949 DUSP14O95147 198 aaKnown RBP8.08□□□□□ -1.12
HLA-DQA1-202ENST00000374949 ZNF705DP0CH99 300 aaPredicted RBP8.08□□□□□ -1.12
HLA-DQA1-202ENST00000374949 ZNF705BP0CI00 300 aaPredicted RBP8.08□□□□□ -1.12
HLA-DQA1-202ENST00000374949 CT45A10P0DMU9 189 aa8.08□□□□□ -1.12
HLA-DQA1-202ENST00000374949 HIST1H1AQ02539 215 aaPredicted RBP8.08□□□□□ -1.12
HLA-DQA1-202ENST00000374949 IBA57Q5T440 356 aaKnown RBP8.08□□□□□ -1.12
HLA-DQA1-202ENST00000374949 PRR27Q6MZM9 219 aa8.08□□□□□ -1.12
HLA-DQA1-202ENST00000374949 TMEM88Q6PEY1 159 aa8.08□□□□□ -1.12
HLA-DQA1-202ENST00000374949 NUDT10Q8NFP7 164 aa8.08□□□□□ -1.12
HLA-DQA1-202ENST00000374949 NUDT11Q96G61 164 aa8.08□□□□□ -1.12
HLA-DQA1-202ENST00000374949 ZC2HC1AQ96GY0 325 aa8.08□□□□□ -1.12
HLA-DQA1-202ENST00000374949 C8orf49Q96NF6 230 aa8.08□□□□□ -1.12
HLA-DQA1-202ENST00000374949 RNASE7Q9H1E1 156 aaKnown RBP8.08□□□□□ -1.12
HLA-DQA1-202ENST00000374949 A0A0J9YX75 114 aa8.07□□□□□ -1.12
HLA-DQA1-202ENST00000374949 DEFB131AP59861 70 aa8.07□□□□□ -1.12
HLA-DQA1-202ENST00000374949 DEFB1P60022 68 aa8.07□□□□□ -1.12
HLA-DQA1-202ENST00000374949 PLECQ15149 4684 aaKnown RBP8.07□□□□□ -1.12
HLA-DQA1-202ENST00000374949 SMUG1Q53HV7 270 aa8.07□□□□□ -1.12
HLA-DQA1-202ENST00000374949 FOXI2Q6ZQN5 318 aa8.07□□□□□ -1.12
HLA-DQA1-202ENST00000374949 CBLN2Q8IUK8 224 aa8.07□□□□□ -1.12
HLA-DQA1-202ENST00000374949 Q8TAT8 98 aa8.07□□□□□ -1.12
HLA-DQA1-202ENST00000374949 TRBV7-9A0A0J9YWB2 115 aa8.06□□□□□ -1.12
HLA-DQA1-202ENST00000374949 C19orf71A6NCJ1 209 aa8.06□□□□□ -1.12
HLA-DQA1-202ENST00000374949 ZNF705GA8MUZ8 300 aaPredicted RBP8.06□□□□□ -1.12
HLA-DQA1-202ENST00000374949 S100PP25815 95 aa8.06□□□□□ -1.12
HLA-DQA1-202ENST00000374949 CRIP1P50238 77 aa8.06□□□□□ -1.12
HLA-DQA1-202ENST00000374949 LINC00322Q6ZN03 302 aaPredicted RBP8.06□□□□□ -1.12
HLA-DQA1-202ENST00000374949 GTSCR1Q86UQ5 136 aa8.06□□□□□ -1.12
HLA-DQA1-202ENST00000374949 IMMP2LQ96T52 175 aa8.06□□□□□ -1.12
HLA-DQA1-202ENST00000374949 SAV1Q9H4B6 383 aaPredicted RBP8.06□□□□□ -1.12
HLA-DQA1-202ENST00000374949 V9GYV3 84 aa8.06□□□□□ -1.12
HLA-DQA1-202ENST00000374949 FABP5P3A8MUU1 101 aa8.05□□□□□ -1.12
HLA-DQA1-202ENST00000374949 P01737 135 aa8.05□□□□□ -1.12
HLA-DQA1-202ENST00000374949 FAM162BQ5T6X4 162 aa8.05□□□□□ -1.12
HLA-DQA1-202ENST00000374949 OR4B1Q8NGF8 309 aa8.05□□□□□ -1.12
HLA-DQA1-202ENST00000374949 FAM19A4Q96LR4 140 aa8.05□□□□□ -1.12
HLA-DQA1-202ENST00000374949 MAP6D1Q9H9H5 199 aa8.05□□□□□ -1.12
HLA-DQA1-202ENST00000374949 IL36BQ9NZH7 164 aa8.05□□□□□ -1.12
HLA-DQA1-202ENST00000374949 KNCNA6PVL3 124 aa8.04□□□□□ -1.12
HLA-DQA1-202ENST00000374949 OR11H12B2RN74 326 aa8.04□□□□□ -1.12
HLA-DQA1-202ENST00000374949 GPX1P07203 203 aa8.04□□□□□ -1.12
HLA-DQA1-202ENST00000374949 PFN1P07737 140 aaKnown RBP8.04□□□□□ -1.12
HLA-DQA1-202ENST00000374949 CRISP2P16562 243 aa8.04□□□□□ -1.12
HLA-DQA1-202ENST00000374949 LEPP41159 167 aa8.04□□□□□ -1.12
HLA-DQA1-202ENST00000374949 GDF5OSQ5U4N7 250 aa8.04□□□□□ -1.12
HLA-DQA1-202ENST00000374949 KCNIP4Q6PIL6 250 aa8.04□□□□□ -1.12
HLA-DQA1-202ENST00000374949 ODF3Q96PU9 254 aa8.04□□□□□ -1.12
HLA-DQA1-202ENST00000374949 RPP21Q9H633 154 aaKnown RBP8.04□□□□□ -1.12
HLA-DQA1-202ENST00000374949 COLCA2A8K830 154 aa8.03□□□□□ -1.12
HLA-DQA1-202ENST00000374949 A8MWL6 223 aa8.03□□□□□ -1.12
HLA-DQA1-202ENST00000374949 H3BMM0 161 aa8.03□□□□□ -1.12
HLA-DQA1-202ENST00000374949 SH2D1AO60880 128 aa8.03□□□□□ -1.12
HLA-DQA1-202ENST00000374949 HLA-DRB4P13762 266 aa8.03□□□□□ -1.12
HLA-DQA1-202ENST00000374949 TSPOP30536 169 aa8.03□□□□□ -1.12
HLA-DQA1-202ENST00000374949 ZNF80P51504 273 aaPredicted RBP8.03□□□□□ -1.12
HLA-DQA1-202ENST00000374949 ELOBQ15370 118 aa8.03□□□□□ -1.12
HLA-DQA1-202ENST00000374949 CT83Q5H943 113 aa8.03□□□□□ -1.12
HLA-DQA1-202ENST00000374949 ACTL10Q5JWF8 245 aa8.03□□□□□ -1.12
HLA-DQA1-202ENST00000374949 APRG1Q8IVJ8 170 aa8.03□□□□□ -1.12
HLA-DQA1-202ENST00000374949 IL17DQ8TAD2 202 aa8.03□□□□□ -1.12
HLA-DQA1-202ENST00000374949 WFDC10AQ9H1F0 79 aa8.03□□□□□ -1.12
HLA-DQA1-202ENST00000374949 URGCP-MRPS24S4R325 110 aa8.03□□□□□ -1.12
HLA-DQA1-202ENST00000374949 HLA-DRB4X5D2U9 266 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms