RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 F8W735 103 aaPredicted RBP8.59□□□□□ -1.03
CCDC40-203ENST00000374877 DPM3Q9P2X0 92 aa8.59□□□□□ -1.03
CCDC40-203ENST00000374877 ZNF207O43670 478 aaKnown RBP8.58□□□□□ -1.04
CCDC40-203ENST00000374877 C5orf64Q2M2E5 130 aa8.58□□□□□ -1.04
CCDC40-203ENST00000374877 COX8CQ7Z4L0 72 aa8.58□□□□□ -1.04
CCDC40-203ENST00000374877 CEND1Q8N111 149 aa8.58□□□□□ -1.04
CCDC40-203ENST00000374877 DYNAPQ8N1N2 210 aa8.58□□□□□ -1.04
CCDC40-203ENST00000374877 PIFOQ8TCI5 191 aa8.58□□□□□ -1.04
CCDC40-203ENST00000374877 ARPC1AQ92747 370 aa8.58□□□□□ -1.04
CCDC40-203ENST00000374877 ZMAT4Q9H898 229 aa8.58□□□□□ -1.04
CCDC40-203ENST00000374877 SMAD5-AS1Q9Y6J3 95 aa8.58□□□□□ -1.04
CCDC40-203ENST00000374877 MED13LQ71F56 2210 aa8.58□□□□□ -1.04
CCDC40-203ENST00000374877 NDPQ00604 133 aa8.58□□□□□ -1.04
CCDC40-203ENST00000374877 ZNF575Q86XF7 245 aa8.58□□□□□ -1.04
CCDC40-203ENST00000374877 MRPL35Q9NZE8 188 aaKnown RBP8.58□□□□□ -1.04
CCDC40-203ENST00000374877 PRAC2D3DTV9 90 aa8.58□□□□□ -1.04
CCDC40-203ENST00000374877 ATP5LO75964 103 aa8.58□□□□□ -1.04
CCDC40-203ENST00000374877 IGHG4P01861 327 aa8.58□□□□□ -1.04
CCDC40-203ENST00000374877 SRSF1Q07955 248 aaKnown RBP eCLIP8.58□□□□□ -1.04
CCDC40-203ENST00000374877 RNF182Q8N6D2 247 aa8.58□□□□□ -1.04
CCDC40-203ENST00000374877 UBTD1Q9HAC8 227 aa8.58□□□□□ -1.04
CCDC40-203ENST00000374877 UFC1Q9Y3C8 167 aa8.58□□□□□ -1.04
CCDC40-203ENST00000374877 AGRNO00468 2067 aa8.57□□□□□ -1.04
CCDC40-203ENST00000374877 SMAGPQ0VAQ4 97 aa8.57□□□□□ -1.04
CCDC40-203ENST00000374877 PSMG4Q5JS54 123 aa8.57□□□□□ -1.04
CCDC40-203ENST00000374877 TRAV26-2A0A0B4J265 109 aa8.57□□□□□ -1.04
CCDC40-203ENST00000374877 IGHV3-66A0A0C4DH42 116 aa8.57□□□□□ -1.04
CCDC40-203ENST00000374877 TRGV3P03979 118 aa8.57□□□□□ -1.04
CCDC40-203ENST00000374877 WFDC2Q14508 124 aa8.57□□□□□ -1.04
CCDC40-203ENST00000374877 IL17RELQ6ZVW7 336 aa8.57□□□□□ -1.04
CCDC40-203ENST00000374877 MYOZ3Q8TDC0 251 aa8.57□□□□□ -1.04
CCDC40-203ENST00000374877 PHLDA1Q8WV24 401 aaPredicted RBP8.57□□□□□ -1.04
CCDC40-203ENST00000374877 ZNF479Q96JC4 524 aa8.57□□□□□ -1.04
CCDC40-203ENST00000374877 CFAP46Q8IYW2 2715 aa8.57□□□□□ -1.04
CCDC40-203ENST00000374877 LY6HO94772 140 aa8.57□□□□□ -1.04
CCDC40-203ENST00000374877 MTURNQ8N3F0 131 aa8.57□□□□□ -1.04
CCDC40-203ENST00000374877 MAPKAPK5-AS1Q8N8E1 139 aa8.57□□□□□ -1.04
CCDC40-203ENST00000374877 Q8N8P6 123 aa8.57□□□□□ -1.04
CCDC40-203ENST00000374877 CFHR4Q92496 578 aa8.57□□□□□ -1.04
CCDC40-203ENST00000374877 IGHV3OR16-13A0A075B7E8 117 aa8.56□□□□□ -1.04
CCDC40-203ENST00000374877 IGHV3-74A0A0B4J1X5 117 aa8.56□□□□□ -1.04
CCDC40-203ENST00000374877 NDUFA3O95167 84 aa8.56□□□□□ -1.04
CCDC40-203ENST00000374877 AZU1P20160 251 aa8.56□□□□□ -1.04
CCDC40-203ENST00000374877 CEACAM3P40198 252 aa8.56□□□□□ -1.04
CCDC40-203ENST00000374877 CNFNQ9BYD5 112 aa8.56□□□□□ -1.04
CCDC40-203ENST00000374877 SMPXQ9UHP9 88 aa8.56□□□□□ -1.04
CCDC40-203ENST00000374877 TSSC4Q9Y5U2 329 aaPredicted RBP8.56□□□□□ -1.04
CCDC40-203ENST00000374877 H3BMG7 143 aa8.56□□□□□ -1.04
CCDC40-203ENST00000374877 CTSGP08311 255 aa8.56□□□□□ -1.04
CCDC40-203ENST00000374877 AMTNQ6UX39 209 aa8.56□□□□□ -1.04
CCDC40-203ENST00000374877 NPBQ8NG41 125 aa8.56□□□□□ -1.04
CCDC40-203ENST00000374877 TM2D2Q9BX73 214 aa8.56□□□□□ -1.04
CCDC40-203ENST00000374877 IGLL5B9A064 214 aa8.55□□□□□ -1.04
CCDC40-203ENST00000374877 SCGB2A1O75556 95 aa8.55□□□□□ -1.04
CCDC40-203ENST00000374877 TIMD4Q96H15 378 aa8.55□□□□□ -1.04
CCDC40-203ENST00000374877 HIST1H4GQ99525 98 aa8.55□□□□□ -1.04
CCDC40-203ENST00000374877 EFNA4P52798 201 aa8.55□□□□□ -1.04
CCDC40-203ENST00000374877 SIGMAR1Q99720 223 aa8.55□□□□□ -1.04
CCDC40-203ENST00000374877 LINC01546A6NGU7 62 aa8.55□□□□□ -1.04
CCDC40-203ENST00000374877 CIDEAO60543 219 aa8.55□□□□□ -1.04
CCDC40-203ENST00000374877 TMEM11P17152 192 aa8.55□□□□□ -1.04
CCDC40-203ENST00000374877 ETDBQ3ZM63 59 aa8.55□□□□□ -1.04
CCDC40-203ENST00000374877 LINC01559Q495D7 138 aa8.55□□□□□ -1.04
CCDC40-203ENST00000374877 SH2D6Q7Z4S9 175 aa8.55□□□□□ -1.04
CCDC40-203ENST00000374877 ZNF48Q96MX3 618 aaPredicted RBP8.55□□□□□ -1.04
CCDC40-203ENST00000374877 E9PLD3 99 aa8.54□□□□□ -1.04
CCDC40-203ENST00000374877 LAGE3Q14657 143 aa8.54□□□□□ -1.04
CCDC40-203ENST00000374877 FOXI2Q6ZQN5 318 aa8.54□□□□□ -1.04
CCDC40-203ENST00000374877 TTC9CQ8N5M4 171 aa8.54□□□□□ -1.04
CCDC40-203ENST00000374877 LRBAP50851 2863 aa8.54□□□□□ -1.04
CCDC40-203ENST00000374877 IGKV3D-20A0A0C4DH25 116 aa8.54□□□□□ -1.04
CCDC40-203ENST00000374877 J3QR89 54 aa8.54□□□□□ -1.04
CCDC40-203ENST00000374877 C12orf74Q32Q52 190 aa8.54□□□□□ -1.04
CCDC40-203ENST00000374877 KLK15Q9H2R5 256 aa8.54□□□□□ -1.04
CCDC40-203ENST00000374877 IGHV3-49A0A0A0MS15 119 aa8.54□□□□□ -1.04
CCDC40-203ENST00000374877 COX6B1P14854 86 aa8.54□□□□□ -1.04
CCDC40-203ENST00000374877 SRSF2Q01130 221 aaKnown RBP8.54□□□□□ -1.04
CCDC40-203ENST00000374877 C11orf21Q9P2W6 132 aa8.54□□□□□ -1.04
CCDC40-203ENST00000374877 IGLV2-18A0A075B6J9 118 aa8.53□□□□□ -1.04
CCDC40-203ENST00000374877 SPANXB1Q9NS25 103 aaPredicted RBP8.53□□□□□ -1.04
CCDC40-203ENST00000374877 EPG5Q9HCE0 2579 aa8.53□□□□□ -1.04
CCDC40-203ENST00000374877 GAGE12HA6NDE8 117 aa8.53□□□□□ -1.04
CCDC40-203ENST00000374877 F8W1H4 67 aa8.53□□□□□ -1.04
CCDC40-203ENST00000374877 SPANXN1Q5VSR9 72 aa8.53□□□□□ -1.04
CCDC40-203ENST00000374877 CLEC2AQ6UVW9 174 aa8.53□□□□□ -1.04
CCDC40-203ENST00000374877 OR11H6Q8NGC7 330 aa8.53□□□□□ -1.04
CCDC40-203ENST00000374877 DOPEY1Q5JWR5 2465 aa8.53□□□□□ -1.04
CCDC40-203ENST00000374877 PLA2G2AP14555 144 aa8.53□□□□□ -1.04
CCDC40-203ENST00000374877 LCNL1Q6ZST4 164 aa8.53□□□□□ -1.04
CCDC40-203ENST00000374877 A0A087WX48 190 aa8.52□□□□□ -1.05
CCDC40-203ENST00000374877 CD300EQ496F6 205 aaPredicted RBP8.52□□□□□ -1.05
CCDC40-203ENST00000374877 AGPAT4-IT1Q9H0P7 198 aa8.52□□□□□ -1.05
CCDC40-203ENST00000374877 SPTAN1Q13813 2472 aaKnown RBP8.52□□□□□ -1.05
CCDC40-203ENST00000374877 ECSCRQ19T08 205 aa8.52□□□□□ -1.05
CCDC40-203ENST00000374877 CHTOPQ9Y3Y2 248 aaKnown RBP8.52□□□□□ -1.05
CCDC40-203ENST00000374877 KMT2BQ9UMN6 2715 aaPredicted RBP8.52□□□□□ -1.05
CCDC40-203ENST00000374877 J3QKU1 62 aa8.51□□□□□ -1.05
CCDC40-203ENST00000374877 C15orf32Q32M92 178 aa8.51□□□□□ -1.05
CCDC40-203ENST00000374877 TMEM78Q5T7P6 136 aa8.51□□□□□ -1.05
CCDC40-203ENST00000374877 Q6ZQT7 251 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms