RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 NAA38Q9BRA0 125 aaKnown RBP5.07□□□□□ -1.6
PTPN3-202ENST00000374541 SHANK2-AS3Q9BTD1 123 aa5.07□□□□□ -1.6
PTPN3-202ENST00000374541 ZNF319Q9P2F9 582 aa5.07□□□□□ -1.6
PTPN3-202ENST00000374541 FAM231DQ6ZW35 169 aa5.07□□□□□ -1.6
PTPN3-202ENST00000374541 CCL24O00175 119 aa5.06□□□□□ -1.6
PTPN3-202ENST00000374541 DAD1P61803 113 aa5.06□□□□□ -1.6
PTPN3-202ENST00000374541 SCRT1Q9BWW7 348 aa5.06□□□□□ -1.6
PTPN3-202ENST00000374541 IGHV1-8P0DP01 117 aa5.06□□□□□ -1.6
PTPN3-202ENST00000374541 HLA-DMBP28068 263 aa5.06□□□□□ -1.6
PTPN3-202ENST00000374541 CFHR2P36980 270 aa5.06□□□□□ -1.6
PTPN3-202ENST00000374541 UBE2E1P51965 193 aa5.06□□□□□ -1.6
PTPN3-202ENST00000374541 NKAPP1Q8N9T2 125 aa5.06□□□□□ -1.6
PTPN3-202ENST00000374541 DSPP15924 2871 aaKnown RBP5.06□□□□□ -1.6
PTPN3-202ENST00000374541 IGHV1-3A0A0C4DH29 117 aa5.06□□□□□ -1.6
PTPN3-202ENST00000374541 I3L3M4 83 aa5.06□□□□□ -1.6
PTPN3-202ENST00000374541 NPC2P61916 151 aa5.06□□□□□ -1.6
PTPN3-202ENST00000374541 C5orf64Q2M2E5 130 aa5.06□□□□□ -1.6
PTPN3-202ENST00000374541 SUMO4Q6EEV6 95 aa5.06□□□□□ -1.6
PTPN3-202ENST00000374541 DSCR8Q96T75 97 aa5.06□□□□□ -1.6
PTPN3-202ENST00000374541 ANAPC1Q9H1A4 1944 aa5.06□□□□□ -1.6
PTPN3-202ENST00000374541 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.06□□□□□ -1.6
PTPN3-202ENST00000374541 SELENOKQ9Y6D0 94 aa5.06□□□□□ -1.6
PTPN3-202ENST00000374541 KIF26BQ2KJY2 2108 aa5.06□□□□□ -1.6
PTPN3-202ENST00000374541 DNAJC9-AS1A6NH13 148 aa5.06□□□□□ -1.6
PTPN3-202ENST00000374541 F5H768 121 aa5.06□□□□□ -1.6
PTPN3-202ENST00000374541 K7EMI3 77 aa5.06□□□□□ -1.6
PTPN3-202ENST00000374541 K7EP13 123 aa5.06□□□□□ -1.6
PTPN3-202ENST00000374541 COX8AP10176 69 aa5.06□□□□□ -1.6
PTPN3-202ENST00000374541 C2orf66Q6UXQ4 117 aa5.06□□□□□ -1.6
PTPN3-202ENST00000374541 C14orf178Q8N769 122 aaPredicted RBP5.06□□□□□ -1.6
PTPN3-202ENST00000374541 ROS1P08922 2347 aa5.06□□□□□ -1.6
PTPN3-202ENST00000374541 LYPD3O95274 346 aa5.05□□□□□ -1.6
PTPN3-202ENST00000374541 GP9P14770 177 aa5.05□□□□□ -1.6
PTPN3-202ENST00000374541 PRR31Q5SQ13 230 aa5.05□□□□□ -1.6
PTPN3-202ENST00000374541 FAM104BQ5XKR9 115 aa5.05□□□□□ -1.6
PTPN3-202ENST00000374541 GGNQ86UU5 652 aa5.05□□□□□ -1.6
PTPN3-202ENST00000374541 ZNF114Q8NC26 417 aa5.05□□□□□ -1.6
PTPN3-202ENST00000374541 DAZ1Q9NQZ3 744 aaKnown RBP5.05□□□□□ -1.6
PTPN3-202ENST00000374541 POLR3KQ9Y2Y1 108 aaPredicted RBP5.05□□□□□ -1.6
PTPN3-202ENST00000374541 FASNP49327 2511 aaKnown RBP5.05□□□□□ -1.6
PTPN3-202ENST00000374541 SNRNP200O75643 2136 aaKnown RBP5.05□□□□□ -1.6
PTPN3-202ENST00000374541 TRBV25-1A0A075B6N4 114 aa5.05□□□□□ -1.6
PTPN3-202ENST00000374541 A0A1W2PNU3 283 aaPredicted RBP5.05□□□□□ -1.6
PTPN3-202ENST00000374541 ZNF561-AS1K7EIQ3 104 aa5.05□□□□□ -1.6
PTPN3-202ENST00000374541 EXOC3-AS1Q8N2X6 119 aa5.05□□□□□ -1.6
PTPN3-202ENST00000374541 ANKRD29Q8N6D5 301 aa5.05□□□□□ -1.6
PTPN3-202ENST00000374541 ZNF625Q96I27 306 aaPredicted RBP5.05□□□□□ -1.6
PTPN3-202ENST00000374541 PRO1854Q9UHT4 67 aa5.05□□□□□ -1.6
PTPN3-202ENST00000374541 WNK2Q9Y3S1 2297 aa5.05□□□□□ -1.6
PTPN3-202ENST00000374541 IGKV1-5P01602 117 aa5.05□□□□□ -1.6
PTPN3-202ENST00000374541 IGLC2P0DOY2 106 aa5.05□□□□□ -1.6
PTPN3-202ENST00000374541 IGLC3P0DOY3 106 aa5.05□□□□□ -1.6
PTPN3-202ENST00000374541 YPEL3P61236 119 aaPredicted RBP5.05□□□□□ -1.6
PTPN3-202ENST00000374541 SPXQ9BT56 116 aa5.05□□□□□ -1.6
PTPN3-202ENST00000374541 A0A0A6YYD4 124 aa5.05□□□□□ -1.6
PTPN3-202ENST00000374541 TRAV13-1A0A0B4J241 112 aa5.05□□□□□ -1.6
PTPN3-202ENST00000374541 GAGE12HA6NDE8 117 aa5.05□□□□□ -1.6
PTPN3-202ENST00000374541 H0YJW9 148 aa5.05□□□□□ -1.6
PTPN3-202ENST00000374541 PFN1P07737 140 aaKnown RBP5.05□□□□□ -1.6
PTPN3-202ENST00000374541 SYNJ2BPP57105 145 aa5.05□□□□□ -1.6
PTPN3-202ENST00000374541 C18orf32Q8TCD1 76 aa5.05□□□□□ -1.6
PTPN3-202ENST00000374541 TP53TG1Q9Y2A0 90 aa5.05□□□□□ -1.6
PTPN3-202ENST00000374541 DMXL2Q8TDJ6 3036 aa5.05□□□□□ -1.6
PTPN3-202ENST00000374541 IGHV4-31P0DP07 118 aa5.05□□□□□ -1.6
PTPN3-202ENST00000374541 HAMPP81172 84 aa5.05□□□□□ -1.6
PTPN3-202ENST00000374541 SMIM20Q8N5G0 67 aa5.05□□□□□ -1.6
PTPN3-202ENST00000374541 STPG4Q8N801 248 aa5.05□□□□□ -1.6
PTPN3-202ENST00000374541 FLVCR1-AS1Q8TAF5 88 aa5.05□□□□□ -1.6
PTPN3-202ENST00000374541 A0A1W2PPM0 123 aa5.04□□□□□ -1.6
PTPN3-202ENST00000374541 HLA-DRB4P13762 266 aa5.04□□□□□ -1.6
PTPN3-202ENST00000374541 AMN1Q8IY45 258 aa5.04□□□□□ -1.6
PTPN3-202ENST00000374541 HLA-DRB4X5D2U9 266 aa5.04□□□□□ -1.6
PTPN3-202ENST00000374541 RPL15P61313 204 aaKnown RBP5.04□□□□□ -1.6
PTPN3-202ENST00000374541 HERVK_113P63121 156 aa5.04□□□□□ -1.6
PTPN3-202ENST00000374541 RBM3P98179 157 aaKnown RBP5.04□□□□□ -1.6
PTPN3-202ENST00000374541 MST1LQ2TV78 715 aa5.04□□□□□ -1.6
PTPN3-202ENST00000374541 GFI1Q99684 422 aa5.04□□□□□ -1.6
PTPN3-202ENST00000374541 PYGO2Q9BRQ0 406 aa5.04□□□□□ -1.6
PTPN3-202ENST00000374541 ABCA1O95477 2261 aa5.04□□□□□ -1.6
PTPN3-202ENST00000374541 IGKV1D-8A0A087WSZ0 117 aa5.04□□□□□ -1.6
PTPN3-202ENST00000374541 IGHV2-5P01817 119 aa5.04□□□□□ -1.6
PTPN3-202ENST00000374541 GAGE5Q13069 117 aa5.04□□□□□ -1.6
PTPN3-202ENST00000374541 GAGE6Q13070 117 aa5.04□□□□□ -1.6
PTPN3-202ENST00000374541 CARD19Q96LW7 228 aa5.04□□□□□ -1.6
PTPN3-202ENST00000374541 C20orf78Q9BR46 151 aa5.04□□□□□ -1.6
PTPN3-202ENST00000374541 DOCK10Q96BY6 2186 aa5.03□□□□□ -1.6
PTPN3-202ENST00000374541 RNASE2P10153 161 aaKnown RBP5.03□□□□□ -1.6
PTPN3-202ENST00000374541 FGF6P10767 208 aa5.03□□□□□ -1.6
PTPN3-202ENST00000374541 BVES-AS1Q5T3Y7 98 aa5.03□□□□□ -1.6
PTPN3-202ENST00000374541 NDUFA12Q9UI09 145 aa5.03□□□□□ -1.6
PTPN3-202ENST00000374541 RHPN1-AS1Q9BWJ2 59 aa5.03□□□□□ -1.6
PTPN3-202ENST00000374541 IGKV1-12A0A0C4DH73 117 aa5.03□□□□□ -1.6
PTPN3-202ENST00000374541 C15orf62A8K5M9 175 aa5.03□□□□□ -1.6
PTPN3-202ENST00000374541 IGKV1D-12P01611 117 aa5.03□□□□□ -1.6
PTPN3-202ENST00000374541 ARMS2P0C7Q2 107 aa5.03□□□□□ -1.6
PTPN3-202ENST00000374541 UBE2E2Q96LR5 201 aa5.03□□□□□ -1.6
PTPN3-202ENST00000374541 TMEM14CQ9P0S9 112 aa5.03□□□□□ -1.6
PTPN3-202ENST00000374541 SIGLEC9Q9Y336 463 aa5.03□□□□□ -1.6
PTPN3-202ENST00000374541 EFNA2O43921 213 aa5.03□□□□□ -1.6
PTPN3-202ENST00000374541 IL15RAQ13261 267 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms