RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 PKIGQ9Y2B9 76 aa8.13□□□□□ -1.11
CD28-202ENST00000374481 TRAV41A0A0B4J266 112 aa8.13□□□□□ -1.11
CD28-202ENST00000374481 DUSP14O95147 198 aaKnown RBP8.13□□□□□ -1.11
CD28-202ENST00000374481 ATP5G1P05496 136 aa8.13□□□□□ -1.11
CD28-202ENST00000374481 RNASE4P34096 147 aaKnown RBP8.13□□□□□ -1.11
CD28-202ENST00000374481 PATE2Q6UY27 113 aa8.13□□□□□ -1.11
CD28-202ENST00000374481 FGF23Q9GZV9 251 aaPredicted RBP8.13□□□□□ -1.11
CD28-202ENST00000374481 APC2O95996 2303 aa8.13□□□□□ -1.11
CD28-202ENST00000374481 KIAA1671Q9BY89 1806 aa8.12□□□□□ -1.11
CD28-202ENST00000374481 VWCEQ96DN2 955 aa8.12□□□□□ -1.11
CD28-202ENST00000374481 TMEM14CQ9P0S9 112 aa8.12□□□□□ -1.11
CD28-202ENST00000374481 CADP27708 2225 aa8.12□□□□□ -1.11
CD28-202ENST00000374481 RBM3P98179 157 aaKnown RBP8.12□□□□□ -1.11
CD28-202ENST00000374481 WDR86Q86TI4 376 aa8.12□□□□□ -1.11
CD28-202ENST00000374481 Q8TCH9 128 aa8.12□□□□□ -1.11
CD28-202ENST00000374481 URB1-AS1Q96HZ7 61 aa8.12□□□□□ -1.11
CD28-202ENST00000374481 CACNA1EQ15878 2313 aa8.12□□□□□ -1.11
CD28-202ENST00000374481 IGKV1D-17A0A075B6S4 117 aa8.12□□□□□ -1.11
CD28-202ENST00000374481 TRAV17A0A0B4J275 112 aa8.12□□□□□ -1.11
CD28-202ENST00000374481 P0C879 139 aa8.12□□□□□ -1.11
CD28-202ENST00000374481 SRD5A1P18405 259 aa8.12□□□□□ -1.11
CD28-202ENST00000374481 ZNF134P52741 427 aa8.12□□□□□ -1.11
CD28-202ENST00000374481 H3BT86 120 aa8.11□□□□□ -1.11
CD28-202ENST00000374481 IGHV1-2P23083 117 aa8.11□□□□□ -1.11
CD28-202ENST00000374481 Q6ZS92 163 aa8.11□□□□□ -1.11
CD28-202ENST00000374481 MAPKAPK5-AS1Q8N8E1 139 aa8.11□□□□□ -1.11
CD28-202ENST00000374481 THAP8Q8NA92 274 aa8.11□□□□□ -1.11
CD28-202ENST00000374481 MSRB1Q9NZV6 116 aa8.11□□□□□ -1.11
CD28-202ENST00000374481 MOB4Q9Y3A3 225 aa8.11□□□□□ -1.11
CD28-202ENST00000374481 RBMY1BA6NDE4 496 aaKnown RBP8.11□□□□□ -1.11
CD28-202ENST00000374481 RBMY1EA6NEQ0 496 aaKnown RBP8.11□□□□□ -1.11
CD28-202ENST00000374481 RBMY1DP0C7P1 496 aaKnown RBP8.11□□□□□ -1.11
CD28-202ENST00000374481 RBMY1A1P0DJD3 496 aaKnown RBP8.11□□□□□ -1.11
CD28-202ENST00000374481 RBMY1CP0DJD4 496 aa8.11□□□□□ -1.11
CD28-202ENST00000374481 EGR2P11161 476 aaPredicted RBP8.11□□□□□ -1.11
CD28-202ENST00000374481 RBMY1FQ15415 496 aaKnown RBP8.11□□□□□ -1.11
CD28-202ENST00000374481 C15orf65H3BRN8 121 aa8.11□□□□□ -1.11
CD28-202ENST00000374481 ERCC8Q13216 396 aa8.11□□□□□ -1.11
CD28-202ENST00000374481 LRRC75A-AS1Q8N1F1 130 aa8.11□□□□□ -1.11
CD28-202ENST00000374481 PROK2Q9HC23 129 aa8.11□□□□□ -1.11
CD28-202ENST00000374481 EML6Q6ZMW3 1958 aa8.11□□□□□ -1.11
CD28-202ENST00000374481 PIFOQ8TCI5 191 aa8.11□□□□□ -1.11
CD28-202ENST00000374481 TMEM243Q9BU79 118 aa8.11□□□□□ -1.11
CD28-202ENST00000374481 ZNRD1Q9P1U0 126 aa8.1□□□□□ -1.11
CD28-202ENST00000374481 ANAPC1Q9H1A4 1944 aa8.1□□□□□ -1.11
CD28-202ENST00000374481 A0A0B4J2C4 111 aa8.1□□□□□ -1.11
CD28-202ENST00000374481 MRPL14Q6P1L8 145 aaKnown RBP8.1□□□□□ -1.11
CD28-202ENST00000374481 LINC00643Q86TS7 51 aa8.1□□□□□ -1.11
CD28-202ENST00000374481 TMEM141Q96I45 108 aa8.1□□□□□ -1.11
CD28-202ENST00000374481 SRRM4A7MD48 611 aaKnown RBP8.1□□□□□ -1.11
CD28-202ENST00000374481 K7EM74 188 aa8.1□□□□□ -1.11
CD28-202ENST00000374481 SRSF2Q01130 221 aaKnown RBP8.1□□□□□ -1.11
CD28-202ENST00000374481 CSDC2Q9Y534 153 aaKnown RBP8.1□□□□□ -1.11
CD28-202ENST00000374481 SOCS3O14543 225 aa8.1□□□□□ -1.11
CD28-202ENST00000374481 THBDP07204 575 aa8.1□□□□□ -1.11
CD28-202ENST00000374481 IGLC6P0CF74 106 aa8.1□□□□□ -1.11
CD28-202ENST00000374481 Q6Q795 121 aa8.1□□□□□ -1.11
CD28-202ENST00000374481 TMEM219Q86XT9 240 aa8.1□□□□□ -1.11
CD28-202ENST00000374481 DDB2Q92466 427 aa8.1□□□□□ -1.11
CD28-202ENST00000374481 C17orf77Q96MU5 243 aa8.1□□□□□ -1.11
CD28-202ENST00000374481 CDIP1Q9H305 208 aa8.09□□□□□ -1.11
CD28-202ENST00000374481 KIF26AQ9ULI4 1882 aaPredicted RBP8.09□□□□□ -1.11
CD28-202ENST00000374481 TIMM23O14925 209 aa8.09□□□□□ -1.11
CD28-202ENST00000374481 CRPP02741 224 aa8.09□□□□□ -1.11
CD28-202ENST00000374481 MUSTN1Q8IVN3 82 aa8.09□□□□□ -1.11
CD28-202ENST00000374481 TOMM7Q9P0U1 55 aa8.09□□□□□ -1.11
CD28-202ENST00000374481 NDUFC2O95298 119 aa8.09□□□□□ -1.11
CD28-202ENST00000374481 GP9P14770 177 aa8.09□□□□□ -1.11
CD28-202ENST00000374481 MLST8Q9BVC4 326 aa8.09□□□□□ -1.11
CD28-202ENST00000374481 TRAV12-1A0A0B4J245 112 aa8.08□□□□□ -1.12
CD28-202ENST00000374481 hADV29S1A0JD25 119 aa8.08□□□□□ -1.12
CD28-202ENST00000374481 CFHR1Q03591 330 aa8.08□□□□□ -1.12
CD28-202ENST00000374481 MUC6Q6W4X9 2439 aa8.08□□□□□ -1.12
CD28-202ENST00000374481 NDUFA12Q9UI09 145 aa8.08□□□□□ -1.12
CD28-202ENST00000374481 V9GYY9 64 aa8.08□□□□□ -1.12
CD28-202ENST00000374481 OOSP1A8MZH6 123 aa8.08□□□□□ -1.12
CD28-202ENST00000374481 IGKV3-20P01619 116 aa8.08□□□□□ -1.12
CD28-202ENST00000374481 LTBRP36941 435 aa8.08□□□□□ -1.12
CD28-202ENST00000374481 ZNF876PQ49A33 203 aa8.08□□□□□ -1.12
CD28-202ENST00000374481 LY6G5BQ8NDX9 201 aa8.08□□□□□ -1.12
CD28-202ENST00000374481 OVOL2Q9BRP0 275 aa8.08□□□□□ -1.12
CD28-202ENST00000374481 IGKV3D-7A0A0C4DH55 119 aa8.08□□□□□ -1.12
CD28-202ENST00000374481 ADARB2-AS1A8MUL3 147 aa8.08□□□□□ -1.12
CD28-202ENST00000374481 PRB3Q04118 309 aaPredicted RBP8.08□□□□□ -1.12
CD28-202ENST00000374481 FAM19A5Q7Z5A7 132 aaPredicted RBP8.08□□□□□ -1.12
CD28-202ENST00000374481 SPRY4Q9C004 299 aa8.08□□□□□ -1.12
CD28-202ENST00000374481 ICOSQ9Y6W8 199 aa8.08□□□□□ -1.12
CD28-202ENST00000374481 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.08□□□□□ -1.12
CD28-202ENST00000374481 THSD7BQ9C0I4 1608 aa8.07□□□□□ -1.12
CD28-202ENST00000374481 CACNA1BQ00975 2339 aa8.07□□□□□ -1.12
CD28-202ENST00000374481 NTN3O00634 580 aaPredicted RBP8.07□□□□□ -1.12
CD28-202ENST00000374481 BAALC-AS2P0C853 105 aa8.07□□□□□ -1.12
CD28-202ENST00000374481 B3GALT5-AS1P59052 145 aa8.07□□□□□ -1.12
CD28-202ENST00000374481 BRK1Q8WUW1 75 aa8.07□□□□□ -1.12
CD28-202ENST00000374481 TMEM258P61165 79 aa8.07□□□□□ -1.12
CD28-202ENST00000374481 MED13Q9UHV7 2174 aa8.07□□□□□ -1.12
CD28-202ENST00000374481 EEF1AKMT3Q96AZ1 226 aa8.07□□□□□ -1.12
CD28-202ENST00000374481 SIGLEC9Q9Y336 463 aa8.07□□□□□ -1.12
CD28-202ENST00000374481 SPTAN1Q13813 2472 aaKnown RBP8.07□□□□□ -1.12
CD28-202ENST00000374481 VWC2LB2RUY7 222 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms