RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 CD7P09564 240 aa13.06□□□□□ -0.32
C9orf43-202ENST00000374165 TCL1AP56279 114 aa13.06□□□□□ -0.32
C9orf43-202ENST00000374165 SNRPEP62304 92 aaKnown RBP13.06□□□□□ -0.32
C9orf43-202ENST00000374165 PRR31Q5SQ13 230 aa13.06□□□□□ -0.32
C9orf43-202ENST00000374165 SAV1Q9H4B6 383 aaPredicted RBP13.06□□□□□ -0.32
C9orf43-202ENST00000374165 ZFP30Q9Y2G7 519 aa13.06□□□□□ -0.32
C9orf43-202ENST00000374165 SMIM27A0A1W2PRY6 76 aa13.05□□□□□ -0.32
C9orf43-202ENST00000374165 C19orf71A6NCJ1 209 aa13.05□□□□□ -0.32
C9orf43-202ENST00000374165 S100A6P06703 90 aa13.05□□□□□ -0.32
C9orf43-202ENST00000374165 ODF3L2Q3SX64 289 aa13.05□□□□□ -0.32
C9orf43-202ENST00000374165 GDF5OSQ5U4N7 250 aa13.05□□□□□ -0.32
C9orf43-202ENST00000374165 BEAN1Q3B7T3 259 aa13.05□□□□□ -0.32
C9orf43-202ENST00000374165 ZNF738Q8NE65 137 aa13.05□□□□□ -0.32
C9orf43-202ENST00000374165 OR2K2Q8NGT1 345 aa13.05□□□□□ -0.32
C9orf43-202ENST00000374165 ZC2HC1AQ96GY0 325 aa13.05□□□□□ -0.32
C9orf43-202ENST00000374165 ZNF492Q9P255 531 aa13.05□□□□□ -0.32
C9orf43-202ENST00000374165 TRAV2A0A0B4J234 112 aa13.04□□□□□ -0.32
C9orf43-202ENST00000374165 C5orf52A6NGY3 159 aa13.04□□□□□ -0.32
C9orf43-202ENST00000374165 OR4C46A6NHA9 309 aa13.04□□□□□ -0.32
C9orf43-202ENST00000374165 TRGC1P0CF51 173 aa13.04□□□□□ -0.32
C9orf43-202ENST00000374165 ID1P41134 155 aa13.04□□□□□ -0.32
C9orf43-202ENST00000374165 DEFB131AP59861 70 aa13.04□□□□□ -0.32
C9orf43-202ENST00000374165 SNRPD3P62318 126 aaKnown RBP13.04□□□□□ -0.32
C9orf43-202ENST00000374165 APRG1Q8IVJ8 170 aa13.04□□□□□ -0.32
C9orf43-202ENST00000374165 MAP6D1Q9H9H5 199 aa13.04□□□□□ -0.32
C9orf43-202ENST00000374165 G3V4G9 280 aa13.03□□□□□ -0.32
C9orf43-202ENST00000374165 ACTL10Q5JWF8 245 aa13.03□□□□□ -0.32
C9orf43-202ENST00000374165 VGLL1Q99990 258 aa13.03□□□□□ -0.32
C9orf43-202ENST00000374165 WFDC10AQ9H1F0 79 aa13.03□□□□□ -0.32
C9orf43-202ENST00000374165 P01737 135 aa13.03□□□□□ -0.32
C9orf43-202ENST00000374165 FRMD6-AS1P0C7T7 363 aa13.03□□□□□ -0.32
C9orf43-202ENST00000374165 SPINK4O60575 86 aa13.02□□□□□ -0.33
C9orf43-202ENST00000374165 ERCC8Q13216 396 aa13.02□□□□□ -0.33
C9orf43-202ENST00000374165 C8orf49Q96NF6 230 aa13.02□□□□□ -0.33
C9orf43-202ENST00000374165 RPP21Q9H633 154 aaKnown RBP13.02□□□□□ -0.33
C9orf43-202ENST00000374165 C19orf73Q9NVV2 129 aa13.02□□□□□ -0.33
C9orf43-202ENST00000374165 KRTAP10-11P60412 298 aa13.01□□□□□ -0.33
C9orf43-202ENST00000374165 FABP9Q0Z7S8 132 aa13.01□□□□□ -0.33
C9orf43-202ENST00000374165 SAMD13Q5VXD3 122 aa13.01□□□□□ -0.33
C9orf43-202ENST00000374165 Q8TAT8 98 aa13.01□□□□□ -0.33
C9orf43-202ENST00000374165 TSKUQ8WUA8 353 aa13.01□□□□□ -0.33
C9orf43-202ENST00000374165 DAZAP1Q96EP5 407 aaKnown RBP13.01□□□□□ -0.33
C9orf43-202ENST00000374165 NPIPB6E9PJ23 425 aa13.01□□□□□ -0.33
C9orf43-202ENST00000374165 CRIP1P50238 77 aa13.01□□□□□ -0.33
C9orf43-202ENST00000374165 MRPL53Q96EL3 112 aaKnown RBP13.01□□□□□ -0.33
C9orf43-202ENST00000374165 FBLL1A6NHQ2 334 aaKnown RBP13□□□□□ -0.33
C9orf43-202ENST00000374165 KNCNA6PVL3 124 aa13□□□□□ -0.33
C9orf43-202ENST00000374165 PRR25Q96S07 402 aa13□□□□□ -0.33
C9orf43-202ENST00000374165 NEU1Q99519 415 aa13□□□□□ -0.33
C9orf43-202ENST00000374165 CLEC5AQ9NY25 188 aa13□□□□□ -0.33
C9orf43-202ENST00000374165 TRAPPC1Q9Y5R8 145 aa13□□□□□ -0.33
C9orf43-202ENST00000374165 CT83Q5H943 113 aa13□□□□□ -0.33
C9orf43-202ENST00000374165 NUP35Q8NFH5 326 aa13□□□□□ -0.33
C9orf43-202ENST00000374165 OR8A1Q8NGG7 326 aa13□□□□□ -0.33
C9orf43-202ENST00000374165 AGPAT4-IT1Q9H0P7 198 aa13□□□□□ -0.33
C9orf43-202ENST00000374165 HIGD1CA8MV81 97 aa12.99□□□□□ -0.33
C9orf43-202ENST00000374165 UBE2CO00762 179 aa12.99□□□□□ -0.33
C9orf43-202ENST00000374165 NDUFA6P56556 154 aa12.99□□□□□ -0.33
C9orf43-202ENST00000374165 SAPCD1Q5SSQ6 148 aa12.99□□□□□ -0.33
C9orf43-202ENST00000374165 NAT8BQ9UHF3 227 aa12.99□□□□□ -0.33
C9orf43-202ENST00000374165 RBAKDNA6NC62 111 aa12.98□□□□□ -0.33
C9orf43-202ENST00000374165 HIST1H1AQ02539 215 aaPredicted RBP12.98□□□□□ -0.33
C9orf43-202ENST00000374165 MRPL54Q6P161 138 aaKnown RBP12.98□□□□□ -0.33
C9orf43-202ENST00000374165 COX8CQ7Z4L0 72 aa12.98□□□□□ -0.33
C9orf43-202ENST00000374165 GPR61Q9BZJ8 451 aa12.98□□□□□ -0.33
C9orf43-202ENST00000374165 A0A0J9YX75 114 aa12.98□□□□□ -0.33
C9orf43-202ENST00000374165 A8MWL6 223 aa12.98□□□□□ -0.33
C9orf43-202ENST00000374165 OR11H12B2RN74 326 aa12.98□□□□□ -0.33
C9orf43-202ENST00000374165 IGKV3-20P01619 116 aa12.98□□□□□ -0.33
C9orf43-202ENST00000374165 CT45A10P0DMU9 189 aa12.98□□□□□ -0.33
C9orf43-202ENST00000374165 EGFEM1PQ0D2K5 195 aa12.98□□□□□ -0.33
C9orf43-202ENST00000374165 GTSF1Q8WW33 167 aa12.98□□□□□ -0.33
C9orf43-202ENST00000374165 NBEAL2Q6ZNJ1 2754 aa12.97□□□□□ -0.33
C9orf43-202ENST00000374165 RPL19P84098 196 aaKnown RBP12.97□□□□□ -0.33
C9orf43-202ENST00000374165 SAMD5Q5TGI4 173 aa12.97□□□□□ -0.33
C9orf43-202ENST00000374165 Q8N1Y9 231 aa12.97□□□□□ -0.33
C9orf43-202ENST00000374165 OR4B1Q8NGF8 309 aa12.97□□□□□ -0.33
C9orf43-202ENST00000374165 OR2D3Q8NGH3 330 aa12.97□□□□□ -0.33
C9orf43-202ENST00000374165 SNURFLB1AK76 121 aa12.96□□□□□ -0.33
C9orf43-202ENST00000374165 C9orf47Q6ZRZ4 202 aa12.96□□□□□ -0.33
C9orf43-202ENST00000374165 DEFB125Q8N687 156 aa12.96□□□□□ -0.33
C9orf43-202ENST00000374165 DNAH3Q8TD57 4116 aa12.96□□□□□ -0.33
C9orf43-202ENST00000374165 GNB1LQ9BYB4 327 aa12.96□□□□□ -0.34
C9orf43-202ENST00000374165 H3BMM0 161 aa12.95□□□□□ -0.34
C9orf43-202ENST00000374165 GZMBP10144 247 aa12.95□□□□□ -0.34
C9orf43-202ENST00000374165 FOXI2Q6ZQN5 318 aa12.95□□□□□ -0.34
C9orf43-202ENST00000374165 OR10J6PQ8NGY7 276 aa12.95□□□□□ -0.34
C9orf43-202ENST00000374165 GFRA4Q9GZZ7 299 aa12.95□□□□□ -0.34
C9orf43-202ENST00000374165 MRPL18Q9H0U6 180 aaKnown RBP12.95□□□□□ -0.34
C9orf43-202ENST00000374165 HOXA5P20719 270 aa12.95□□□□□ -0.34
C9orf43-202ENST00000374165 ZNF80P51504 273 aaPredicted RBP12.95□□□□□ -0.34
C9orf43-202ENST00000374165 FAM162BQ5T6X4 162 aa12.95□□□□□ -0.34
C9orf43-202ENST00000374165 EBLN2Q6P2I7 272 aa12.95□□□□□ -0.34
C9orf43-202ENST00000374165 TMEM136Q6ZRR5 245 aa12.95□□□□□ -0.34
C9orf43-202ENST00000374165 GTSCR1Q86UQ5 136 aa12.95□□□□□ -0.34
C9orf43-202ENST00000374165 FAM110AQ9BQ89 295 aa12.95□□□□□ -0.34
C9orf43-202ENST00000374165 NDFIP1Q9BT67 221 aa12.95□□□□□ -0.34
C9orf43-202ENST00000374165 RBMY1BA6NDE4 496 aaKnown RBP12.94□□□□□ -0.34
C9orf43-202ENST00000374165 RBMY1EA6NEQ0 496 aaKnown RBP12.94□□□□□ -0.34
C9orf43-202ENST00000374165 SH2D1AO60880 128 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms