RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 ZNF56Q15929 161 aa9.19□□□□□ -0.94
PACSIN1-202ENST00000374043 WIPF2Q8TF74 440 aaPredicted RBP9.19□□□□□ -0.94
PACSIN1-202ENST00000374043 ZNF492Q9P255 531 aa9.19□□□□□ -0.94
PACSIN1-202ENST00000374043 ANKRD17O75179 2603 aaKnown RBP9.19□□□□□ -0.94
PACSIN1-202ENST00000374043 TRBV7-1A0A0A6YYK4 115 aa9.19□□□□□ -0.94
PACSIN1-202ENST00000374043 NDUFA3O95167 84 aa9.19□□□□□ -0.94
PACSIN1-202ENST00000374043 IGLL1P15814 213 aa9.19□□□□□ -0.94
PACSIN1-202ENST00000374043 AGPAT4-IT1Q9H0P7 198 aa9.19□□□□□ -0.94
PACSIN1-202ENST00000374043 SIRPDQ9H106 197 aa9.19□□□□□ -0.94
PACSIN1-202ENST00000374043 MPV17L2Q567V2 206 aa9.18□□□□□ -0.94
PACSIN1-202ENST00000374043 PTPRBP23467 1997 aa9.18□□□□□ -0.94
PACSIN1-202ENST00000374043 INS-IGF2F8WCM5 200 aa9.18□□□□□ -0.94
PACSIN1-202ENST00000374043 PAX1P15863 534 aa9.18□□□□□ -0.94
PACSIN1-202ENST00000374043 PDE6HQ13956 83 aa9.18□□□□□ -0.94
PACSIN1-202ENST00000374043 SCGB1D4Q6XE38 83 aa9.18□□□□□ -0.94
PACSIN1-202ENST00000374043 LY6LH3BQJ8 138 aa9.18□□□□□ -0.94
PACSIN1-202ENST00000374043 RASL11AQ6T310 242 aa9.18□□□□□ -0.94
PACSIN1-202ENST00000374043 IFI27L1Q96BM0 104 aa9.18□□□□□ -0.94
PACSIN1-202ENST00000374043 IGHV3-73A0A0B4J1V6 119 aa9.17□□□□□ -0.94
PACSIN1-202ENST00000374043 TSPOP30536 169 aa9.17□□□□□ -0.94
PACSIN1-202ENST00000374043 MRPL51Q4U2R6 128 aaKnown RBP9.17□□□□□ -0.94
PACSIN1-202ENST00000374043 NPYP01303 97 aa9.17□□□□□ -0.94
PACSIN1-202ENST00000374043 HBDP02042 147 aa9.17□□□□□ -0.94
PACSIN1-202ENST00000374043 TRAV12-2A0A075B6T6 113 aa9.17□□□□□ -0.94
PACSIN1-202ENST00000374043 SNRPD3P62318 126 aaKnown RBP9.17□□□□□ -0.94
PACSIN1-202ENST00000374043 CHCHD1Q96BP2 118 aaKnown RBP9.17□□□□□ -0.94
PACSIN1-202ENST00000374043 LINC00477Q96M19 166 aa9.17□□□□□ -0.94
PACSIN1-202ENST00000374043 A0A087WWL8 130 aa9.16□□□□□ -0.94
PACSIN1-202ENST00000374043 IGLC2P0DOY2 106 aa9.16□□□□□ -0.94
PACSIN1-202ENST00000374043 C11orf71Q6IPW1 123 aa9.16□□□□□ -0.94
PACSIN1-202ENST00000374043 UNQ9165/PRO28630Q6UXU0 137 aa9.16□□□□□ -0.94
PACSIN1-202ENST00000374043 VWC2LB2RUY7 222 aa9.16□□□□□ -0.94
PACSIN1-202ENST00000374043 EMP1P54849 157 aa9.16□□□□□ -0.94
PACSIN1-202ENST00000374043 NUTF2P61970 127 aaKnown RBP9.16□□□□□ -0.94
PACSIN1-202ENST00000374043 C21orf62-AS1Q17RA5 79 aa9.16□□□□□ -0.94
PACSIN1-202ENST00000374043 DEFB112Q30KQ8 113 aa9.16□□□□□ -0.94
PACSIN1-202ENST00000374043 TMEM97Q5BJF2 176 aa9.16□□□□□ -0.94
PACSIN1-202ENST00000374043 C1orf122Q6ZSJ8 110 aa9.16□□□□□ -0.94
PACSIN1-202ENST00000374043 NEGR1Q7Z3B1 354 aa9.16□□□□□ -0.94
PACSIN1-202ENST00000374043 ZNF80P51504 273 aaPredicted RBP9.16□□□□□ -0.94
PACSIN1-202ENST00000374043 PLP1P60201 277 aa9.16□□□□□ -0.94
PACSIN1-202ENST00000374043 LBHQ53QV2 105 aaPredicted RBP9.16□□□□□ -0.94
PACSIN1-202ENST00000374043 FAM104BQ5XKR9 115 aa9.16□□□□□ -0.94
PACSIN1-202ENST00000374043 VPS25Q9BRG1 176 aa9.16□□□□□ -0.94
PACSIN1-202ENST00000374043 ODF3BA8MYP8 253 aa9.16□□□□□ -0.94
PACSIN1-202ENST00000374043 DEFB136Q30KP8 78 aa9.16□□□□□ -0.94
PACSIN1-202ENST00000374043 SIGLEC8Q9NYZ4 499 aa9.16□□□□□ -0.94
PACSIN1-202ENST00000374043 IGLC3P0DOY3 106 aa9.15□□□□□ -0.94
PACSIN1-202ENST00000374043 KLF12Q9Y4X4 402 aa9.15□□□□□ -0.94
PACSIN1-202ENST00000374043 BUB3O43684 328 aa9.15□□□□□ -0.94
PACSIN1-202ENST00000374043 SFTA2Q6UW10 78 aa9.15□□□□□ -0.94
PACSIN1-202ENST00000374043 GTSCR1Q86UQ5 136 aa9.15□□□□□ -0.94
PACSIN1-202ENST00000374043 TMEM158Q8WZ71 300 aa9.15□□□□□ -0.94
PACSIN1-202ENST00000374043 TRAV21A0A0B4J279 112 aa9.14□□□□□ -0.95
PACSIN1-202ENST00000374043 CT83Q5H943 113 aa9.14□□□□□ -0.95
PACSIN1-202ENST00000374043 C5orf56Q8N8D9 126 aa9.14□□□□□ -0.95
PACSIN1-202ENST00000374043 GFRA4Q9GZZ7 299 aa9.14□□□□□ -0.95
PACSIN1-202ENST00000374043 A0A1B0GW15 77 aa9.14□□□□□ -0.95
PACSIN1-202ENST00000374043 WI2-2373I1.2A0A1W2PRP0 233 aa9.14□□□□□ -0.95
PACSIN1-202ENST00000374043 SCGB3A1Q96QR1 104 aa9.14□□□□□ -0.95
PACSIN1-202ENST00000374043 MRGPRG-AS1Q2M3A8 158 aa9.14□□□□□ -0.95
PACSIN1-202ENST00000374043 TEX43Q6ZNM6 134 aa9.14□□□□□ -0.95
PACSIN1-202ENST00000374043 PRSS22Q9GZN4 317 aa9.14□□□□□ -0.95
PACSIN1-202ENST00000374043 TNFRSF6BO95407 300 aa9.13□□□□□ -0.95
PACSIN1-202ENST00000374043 SRSF9Q13242 221 aaKnown RBP eCLIP9.13□□□□□ -0.95
PACSIN1-202ENST00000374043 ARL6IP6Q8N6S5 226 aa9.13□□□□□ -0.95
PACSIN1-202ENST00000374043 C20orf144Q9BQM9 153 aa9.13□□□□□ -0.95
PACSIN1-202ENST00000374043 C2orf88Q9BSF0 95 aa9.13□□□□□ -0.95
PACSIN1-202ENST00000374043 LINC00310P59036 64 aa9.13□□□□□ -0.95
PACSIN1-202ENST00000374043 LOXL1Q08397 574 aaPredicted RBP9.13□□□□□ -0.95
PACSIN1-202ENST00000374043 DNLZQ5SXM8 178 aa9.13□□□□□ -0.95
PACSIN1-202ENST00000374043 PET117Q6UWS5 81 aa9.13□□□□□ -0.95
PACSIN1-202ENST00000374043 C12orf54Q6X4T0 127 aa9.13□□□□□ -0.95
PACSIN1-202ENST00000374043 Q6ZS46 218 aa9.13□□□□□ -0.95
PACSIN1-202ENST00000374043 MBD6Q96DN6 1003 aa9.13□□□□□ -0.95
PACSIN1-202ENST00000374043 JMJD8Q96S16 334 aa9.13□□□□□ -0.95
PACSIN1-202ENST00000374043 MLST8Q9BVC4 326 aa9.13□□□□□ -0.95
PACSIN1-202ENST00000374043 PEF1Q9UBV8 284 aaKnown RBP9.13□□□□□ -0.95
PACSIN1-202ENST00000374043 IGF1P05019 195 aa9.13□□□□□ -0.95
PACSIN1-202ENST00000374043 CRIP1P50238 77 aa9.13□□□□□ -0.95
PACSIN1-202ENST00000374043 C10orf99Q6UWK7 81 aa9.13□□□□□ -0.95
PACSIN1-202ENST00000374043 SMIM12Q96EX1 92 aa9.13□□□□□ -0.95
PACSIN1-202ENST00000374043 CCDC140Q96MF4 163 aa9.13□□□□□ -0.95
PACSIN1-202ENST00000374043 KLK9Q9UKQ9 250 aa9.13□□□□□ -0.95
PACSIN1-202ENST00000374043 C19orf71A6NCJ1 209 aa9.13□□□□□ -0.95
PACSIN1-202ENST00000374043 GNRH2O43555 120 aa9.13□□□□□ -0.95
PACSIN1-202ENST00000374043 SPINK13Q1W4C9 94 aa9.13□□□□□ -0.95
PACSIN1-202ENST00000374043 HIST2H2BCQ6DN03 193 aa9.13□□□□□ -0.95
PACSIN1-202ENST00000374043 C9orf139Q6ZV77 190 aa9.13□□□□□ -0.95
PACSIN1-202ENST00000374043 C10orf105Q8TEF2 133 aa9.13□□□□□ -0.95
PACSIN1-202ENST00000374043 DAZ1Q9NQZ3 744 aaKnown RBP9.13□□□□□ -0.95
PACSIN1-202ENST00000374043 RPL24P83731 157 aaKnown RBP9.12□□□□□ -0.95
PACSIN1-202ENST00000374043 ANXA2RQ3ZCQ2 193 aa9.12□□□□□ -0.95
PACSIN1-202ENST00000374043 Q5PR19 223 aa9.12□□□□□ -0.95
PACSIN1-202ENST00000374043 FAM223BA6NKX1 122 aa9.11□□□□□ -0.95
PACSIN1-202ENST00000374043 KNCNA6PVL3 124 aa9.11□□□□□ -0.95
PACSIN1-202ENST00000374043 Q6ZQT7 251 aa9.11□□□□□ -0.95
PACSIN1-202ENST00000374043 FAM223AQ8IWN6 122 aa9.11□□□□□ -0.95
PACSIN1-202ENST00000374043 LINC01356Q8N9X3 169 aa9.11□□□□□ -0.95
PACSIN1-202ENST00000374043 Q96MF0 132 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms