RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 IL17RELQ6ZVW7 336 aa6.64□□□□□ -1.35
SNRNP40-202ENST00000373720 OR8A1Q8NGG7 326 aa6.64□□□□□ -1.35
SNRNP40-202ENST00000373720 PRELID3AQ96N28 172 aa6.64□□□□□ -1.35
SNRNP40-202ENST00000373720 C8orf49Q96NF6 230 aa6.64□□□□□ -1.35
SNRNP40-202ENST00000373720 BBC3Q96PG8 261 aaPredicted RBP6.64□□□□□ -1.35
SNRNP40-202ENST00000373720 RCHY1Q96PM5 261 aa6.64□□□□□ -1.35
SNRNP40-202ENST00000373720 PMCHL2Q9BQD1 86 aa6.64□□□□□ -1.35
SNRNP40-202ENST00000373720 C2orf88Q9BSF0 95 aa6.64□□□□□ -1.35
SNRNP40-202ENST00000373720 MAP1LC3AQ9H492 121 aa6.64□□□□□ -1.35
SNRNP40-202ENST00000373720 IGSF10Q6WRI0 2623 aa6.64□□□□□ -1.35
SNRNP40-202ENST00000373720 WNK2Q9Y3S1 2297 aa6.64□□□□□ -1.35
SNRNP40-202ENST00000373720 IGHV3OR16-10A0A075B7F0 116 aa6.63□□□□□ -1.35
SNRNP40-202ENST00000373720 C2orf70A6NJV1 201 aa6.63□□□□□ -1.35
SNRNP40-202ENST00000373720 M0R381 172 aa6.63□□□□□ -1.35
SNRNP40-202ENST00000373720 TCAPO15273 167 aa6.63□□□□□ -1.35
SNRNP40-202ENST00000373720 IGHV4-59P01825 116 aa6.63□□□□□ -1.35
SNRNP40-202ENST00000373720 CMC4P56277 68 aaPredicted RBP6.63□□□□□ -1.35
SNRNP40-202ENST00000373720 SRSF1Q07955 248 aaKnown RBP eCLIP6.63□□□□□ -1.35
SNRNP40-202ENST00000373720 C14orf144Q96I85 54 aa6.63□□□□□ -1.35
SNRNP40-202ENST00000373720 FOXC2Q99958 501 aa6.63□□□□□ -1.35
SNRNP40-202ENST00000373720 C20orf78Q9BR46 151 aa6.63□□□□□ -1.35
SNRNP40-202ENST00000373720 TMEM160Q9NX00 188 aa6.63□□□□□ -1.35
SNRNP40-202ENST00000373720 LRBAP50851 2863 aa6.63□□□□□ -1.35
SNRNP40-202ENST00000373720 ABCA1O95477 2261 aa6.62□□□□□ -1.35
SNRNP40-202ENST00000373720 IGHV1-24A0A0C4DH33 117 aa6.62□□□□□ -1.35
SNRNP40-202ENST00000373720 FAM229AH3BQW9 127 aa6.62□□□□□ -1.35
SNRNP40-202ENST00000373720 SYS1-DBNDD2H3BUS1 97 aa6.62□□□□□ -1.35
SNRNP40-202ENST00000373720 HBDP02042 147 aa6.62□□□□□ -1.35
SNRNP40-202ENST00000373720 RNF224P0DH78 156 aa6.62□□□□□ -1.35
SNRNP40-202ENST00000373720 ASIPP42127 132 aa6.62□□□□□ -1.35
SNRNP40-202ENST00000373720 RPL32P62910 135 aaKnown RBP6.62□□□□□ -1.35
SNRNP40-202ENST00000373720 TDRG1Q3Y452 100 aa6.62□□□□□ -1.35
SNRNP40-202ENST00000373720 TM4SF20Q53R12 229 aa6.62□□□□□ -1.35
SNRNP40-202ENST00000373720 PIK3CD-AS1Q5SR53 167 aa6.62□□□□□ -1.35
SNRNP40-202ENST00000373720 CLUHP3Q96NS8 147 aa6.62□□□□□ -1.35
SNRNP40-202ENST00000373720 KLK15Q9H2R5 256 aa6.62□□□□□ -1.35
SNRNP40-202ENST00000373720 MRPS16Q9Y3D3 137 aaKnown RBP6.62□□□□□ -1.35
SNRNP40-202ENST00000373720 CFAP46Q8IYW2 2715 aa6.62□□□□□ -1.35
SNRNP40-202ENST00000373720 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.61□□□□□ -1.354e-7■■■■□ 26.6
SNRNP40-202ENST00000373720 UBR5O95071 2799 aaPredicted RBP6.61□□□□□ -1.35
SNRNP40-202ENST00000373720 TRAV25A0A0B4J276 109 aa6.61□□□□□ -1.35
SNRNP40-202ENST00000373720 IGHV3-35A0A0C4DH35 117 aa6.61□□□□□ -1.35
SNRNP40-202ENST00000373720 OR4C46A6NHA9 309 aa6.61□□□□□ -1.35
SNRNP40-202ENST00000373720 A6NJY4 79 aa6.61□□□□□ -1.35
SNRNP40-202ENST00000373720 KLLNB2CW77 178 aa6.61□□□□□ -1.35
SNRNP40-202ENST00000373720 ZNF80P51504 273 aaPredicted RBP6.61□□□□□ -1.35
SNRNP40-202ENST00000373720 RPL11P62913 178 aaKnown RBP6.61□□□□□ -1.35
SNRNP40-202ENST00000373720 MRPL51Q4U2R6 128 aaKnown RBP6.61□□□□□ -1.35
SNRNP40-202ENST00000373720 SPANXN1Q5VSR9 72 aa6.61□□□□□ -1.35
SNRNP40-202ENST00000373720 EBLN2Q6P2I7 272 aa6.61□□□□□ -1.35
SNRNP40-202ENST00000373720 UNQ9165/PRO28630Q6UXU0 137 aa6.61□□□□□ -1.35
SNRNP40-202ENST00000373720 AMN1Q8IY45 258 aa6.61□□□□□ -1.35
SNRNP40-202ENST00000373720 OR1N2Q8NGR9 330 aa6.61□□□□□ -1.35
SNRNP40-202ENST00000373720 DCANP1Q8TF63 244 aa6.61□□□□□ -1.35
SNRNP40-202ENST00000373720 TPPP3Q9BW30 176 aa6.61□□□□□ -1.35
SNRNP40-202ENST00000373720 PRRC2AP48634 2157 aaKnown RBP6.61□□□□□ -1.35
SNRNP40-202ENST00000373720 SMG1Q96Q15 3661 aaKnown RBP6.6□□□□□ -1.35
SNRNP40-202ENST00000373720 IGKV3D-20A0A0C4DH25 116 aa6.6□□□□□ -1.35
SNRNP40-202ENST00000373720 A0A1B0GUS0 222 aa6.6□□□□□ -1.35
SNRNP40-202ENST00000373720 PRAC2D3DTV9 90 aa6.6□□□□□ -1.35
SNRNP40-202ENST00000373720 D6R8Y8 96 aa6.6□□□□□ -1.35
SNRNP40-202ENST00000373720 J3QKU1 62 aa6.6□□□□□ -1.35
SNRNP40-202ENST00000373720 SMAD7O15105 426 aaKnown RBP6.6□□□□□ -1.35
SNRNP40-202ENST00000373720 ATP5LO75964 103 aa6.6□□□□□ -1.35
SNRNP40-202ENST00000373720 S100A4P26447 101 aaKnown RBP6.6□□□□□ -1.35
SNRNP40-202ENST00000373720 KIR3DS1Q14943 382 aa6.6□□□□□ -1.35
SNRNP40-202ENST00000373720 LGALS9BQ3B8N2 356 aa6.6□□□□□ -1.35
SNRNP40-202ENST00000373720 LINC01545Q5VT33 79 aa6.6□□□□□ -1.35
SNRNP40-202ENST00000373720 LGALS9CQ6DKI2 356 aa6.6□□□□□ -1.35
SNRNP40-202ENST00000373720 ZNF705AQ6ZN79 300 aaPredicted RBP6.6□□□□□ -1.35
SNRNP40-202ENST00000373720 RNF182Q8N6D2 247 aa6.6□□□□□ -1.35
SNRNP40-202ENST00000373720 ZFAND2AQ8N6M9 145 aa6.6□□□□□ -1.35
SNRNP40-202ENST00000373720 POM121L12Q8N7R1 296 aa6.6□□□□□ -1.35
SNRNP40-202ENST00000373720 Q8N8P6 123 aa6.6□□□□□ -1.35
SNRNP40-202ENST00000373720 Q8N976 141 aa6.6□□□□□ -1.35
SNRNP40-202ENST00000373720 Q8TAT8 98 aa6.6□□□□□ -1.35
SNRNP40-202ENST00000373720 C4orf3Q8WVX3 66 aa6.6□□□□□ -1.35
SNRNP40-202ENST00000373720 URB1-AS1Q96HZ7 61 aa6.6□□□□□ -1.35
SNRNP40-202ENST00000373720 ZNF747Q9BV97 191 aa6.6□□□□□ -1.35
SNRNP40-202ENST00000373720 ZNF702PQ9H963 129 aa6.6□□□□□ -1.35
SNRNP40-202ENST00000373720 SCRT2Q9NQ03 307 aa6.6□□□□□ -1.35
SNRNP40-202ENST00000373720 SIGLEC8Q9NYZ4 499 aa6.6□□□□□ -1.35
SNRNP40-202ENST00000373720 LINC00527Q9UJ94 153 aa6.6□□□□□ -1.35
SNRNP40-202ENST00000373720 KMT2BQ9UMN6 2715 aaPredicted RBP6.6□□□□□ -1.35
SNRNP40-202ENST00000373720 MYO18BQ8IUG5 2567 aa6.59□□□□□ -1.35
SNRNP40-202ENST00000373720 LINC01619G3V211 115 aa6.59□□□□□ -1.35
SNRNP40-202ENST00000373720 K7EQG2 157 aa6.59□□□□□ -1.35
SNRNP40-202ENST00000373720 HOXA3O43365 443 aaPredicted RBP6.59□□□□□ -1.35
SNRNP40-202ENST00000373720 NXPH4O95158 308 aa6.59□□□□□ -1.35
SNRNP40-202ENST00000373720 IGHV3-11P01762 117 aa6.59□□□□□ -1.35
SNRNP40-202ENST00000373720 IGLC3P0DOY3 106 aa6.59□□□□□ -1.35
SNRNP40-202ENST00000373720 FCER1GP30273 86 aa6.59□□□□□ -1.35
SNRNP40-202ENST00000373720 SSTP61278 116 aa6.59□□□□□ -1.35
SNRNP40-202ENST00000373720 ERCC8Q13216 396 aa6.59□□□□□ -1.35
SNRNP40-202ENST00000373720 SPATA45Q537H7 98 aa6.59□□□□□ -1.35
SNRNP40-202ENST00000373720 ORMDL2Q53FV1 153 aa6.59□□□□□ -1.35
SNRNP40-202ENST00000373720 FAM159AQ6UWV7 190 aa6.59□□□□□ -1.35
SNRNP40-202ENST00000373720 FOXI2Q6ZQN5 318 aa6.59□□□□□ -1.35
SNRNP40-202ENST00000373720 FAM19A2Q8N3H0 131 aa6.59□□□□□ -1.35
SNRNP40-202ENST00000373720 SYT8Q8NBV8 401 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms