RNA–Protein interactions for RNA: ENST00000373382.5

VPS26A-202, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26A, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-202ENST00000373382 FAM90A27PA6NNH2 459 aa13.79□□□□□ -0.2
VPS26A-202ENST00000373382 AZU1P20160 251 aa13.79□□□□□ -0.2
VPS26A-202ENST00000373382 PIP4P1Q86T03 277 aa13.79□□□□□ -0.2
VPS26A-202ENST00000373382 IGLC6P0CF74 106 aa13.78□□□□□ -0.2
VPS26A-202ENST00000373382 ZNF479Q96JC4 524 aa13.78□□□□□ -0.2
VPS26A-202ENST00000373382 NXT2Q9NPJ8 142 aaKnown RBP13.78□□□□□ -0.2
VPS26A-202ENST00000373382 SPANXN1Q5VSR9 72 aa13.78□□□□□ -0.2
VPS26A-202ENST00000373382 F8W735 103 aaPredicted RBP13.77□□□□□ -0.2
VPS26A-202ENST00000373382 HIF1ANQ9NWT6 349 aa13.77□□□□□ -0.2
VPS26A-202ENST00000373382 IGLV11-55A0A075B6I3 123 aa13.77□□□□□ -0.21
VPS26A-202ENST00000373382 ZNF672Q499Z4 452 aaPredicted RBP13.77□□□□□ -0.21
VPS26A-202ENST00000373382 CTSGP08311 255 aa13.77□□□□□ -0.21
VPS26A-202ENST00000373382 SCGB2A2Q13296 93 aa13.77□□□□□ -0.21
VPS26A-202ENST00000373382 CEND1Q8N111 149 aa13.77□□□□□ -0.21
VPS26A-202ENST00000373382 B9A039 149 aa13.76□□□□□ -0.21
VPS26A-202ENST00000373382 GRNP28799 593 aaKnown RBP13.76□□□□□ -0.21
VPS26A-202ENST00000373382 IGHG4P01861 327 aa13.76□□□□□ -0.21
VPS26A-202ENST00000373382 CLEC3BP05452 202 aa13.75□□□□□ -0.21
VPS26A-202ENST00000373382 Q5PR19 223 aa13.75□□□□□ -0.21
VPS26A-202ENST00000373382 MAP1AP78559 2803 aaPredicted RBP13.75□□□□□ -0.21
VPS26A-202ENST00000373382 CEACAM3P40198 252 aa13.75□□□□□ -0.21
VPS26A-202ENST00000373382 LY6LH3BQJ8 138 aa13.75□□□□□ -0.21
VPS26A-202ENST00000373382 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.74□□□□□ -0.21
VPS26A-202ENST00000373382 C11orf21Q9P2W6 132 aa13.74□□□□□ -0.21
VPS26A-202ENST00000373382 CYSLTR1Q9Y271 337 aa13.74□□□□□ -0.21
VPS26A-202ENST00000373382 C15orf32Q32M92 178 aa13.74□□□□□ -0.21
VPS26A-202ENST00000373382 RNF5Q99942 180 aa13.74□□□□□ -0.21
VPS26A-202ENST00000373382 ZNF292O60281 2723 aa13.73□□□□□ -0.21
VPS26A-202ENST00000373382 IGKV3D-20A0A0C4DH25 116 aa13.73□□□□□ -0.21
VPS26A-202ENST00000373382 IGLL5B9A064 214 aa13.73□□□□□ -0.21
VPS26A-202ENST00000373382 ZNF575Q86XF7 245 aa13.73□□□□□ -0.21
VPS26A-202ENST00000373382 SIGMAR1Q99720 223 aa13.73□□□□□ -0.21
VPS26A-202ENST00000373382 TTC9CQ8N5M4 171 aa13.73□□□□□ -0.21
VPS26A-202ENST00000373382 BSNQ9UPA5 3926 aa13.73□□□□□ -0.21
VPS26A-202ENST00000373382 H3BVH4 76 aa13.73□□□□□ -0.21
VPS26A-202ENST00000373382 M0R381 172 aa13.73□□□□□ -0.21
VPS26A-202ENST00000373382 ATP5LO75964 103 aa13.73□□□□□ -0.21
VPS26A-202ENST00000373382 CLEC19AQ6UXS0 136 aa13.73□□□□□ -0.21
VPS26A-202ENST00000373382 LAGE3Q14657 143 aa13.72□□□□□ -0.21
VPS26A-202ENST00000373382 AGPAT4-IT1Q9H0P7 198 aa13.72□□□□□ -0.21
VPS26A-202ENST00000373382 IGKV3-7A0A075B6H7 116 aa13.72□□□□□ -0.21
VPS26A-202ENST00000373382 C12orf74Q32Q52 190 aa13.72□□□□□ -0.21
VPS26A-202ENST00000373382 TMEM78Q5T7P6 136 aa13.72□□□□□ -0.21
VPS26A-202ENST00000373382 Q8N8P6 123 aa13.72□□□□□ -0.21
VPS26A-202ENST00000373382 SRSF8Q9BRL6 282 aaKnown RBP13.72□□□□□ -0.21
VPS26A-202ENST00000373382 SCGB2A1O75556 95 aa13.71□□□□□ -0.21
VPS26A-202ENST00000373382 INSL3P51460 131 aa13.71□□□□□ -0.21
VPS26A-202ENST00000373382 WFDC12Q8WWY7 111 aa13.71□□□□□ -0.22
VPS26A-202ENST00000373382 GAGE12HA6NDE8 117 aa13.7□□□□□ -0.22
VPS26A-202ENST00000373382 A0A1B0GWB2 263 aa13.69□□□□□ -0.22
VPS26A-202ENST00000373382 DEFB1P60022 68 aa13.69□□□□□ -0.22
VPS26A-202ENST00000373382 ATP5G2Q06055 141 aa13.69□□□□□ -0.22
VPS26A-202ENST00000373382 FOXI2Q6ZQN5 318 aa13.69□□□□□ -0.22
VPS26A-202ENST00000373382 PHLDA1Q8WV24 401 aaPredicted RBP13.69□□□□□ -0.22
VPS26A-202ENST00000373382 HIGD1BQ9P298 99 aa13.69□□□□□ -0.22
VPS26A-202ENST00000373382 LINC00527Q9UJ94 153 aa13.69□□□□□ -0.22
VPS26A-202ENST00000373382 J3QR89 54 aa13.69□□□□□ -0.22
VPS26A-202ENST00000373382 SVIPQ8NHG7 77 aa13.69□□□□□ -0.22
VPS26A-202ENST00000373382 OR11H12B2RN74 326 aa13.69□□□□□ -0.22
VPS26A-202ENST00000373382 G3V318 75 aa13.69□□□□□ -0.22
VPS26A-202ENST00000373382 EMP1P54849 157 aa13.69□□□□□ -0.22
VPS26A-202ENST00000373382 OR11H1Q8NG94 326 aa13.69□□□□□ -0.22
VPS26A-202ENST00000373382 OR11H2Q8NH07 326 aa13.69□□□□□ -0.22
VPS26A-202ENST00000373382 ZMAT4Q9H898 229 aa13.69□□□□□ -0.22
VPS26A-202ENST00000373382 MGPP08493 103 aa13.68□□□□□ -0.22
VPS26A-202ENST00000373382 GAGE13Q4V321 117 aa13.68□□□□□ -0.22
VPS26A-202ENST00000373382 LOC107984156A0A0G2JMH3 177 aa13.68□□□□□ -0.22
VPS26A-202ENST00000373382 TGFAP01135 160 aa13.68□□□□□ -0.22
VPS26A-202ENST00000373382 S100A4P26447 101 aaKnown RBP13.68□□□□□ -0.22
VPS26A-202ENST00000373382 SCGB1D4Q6XE38 83 aa13.68□□□□□ -0.22
VPS26A-202ENST00000373382 VMO1Q7Z5L0 202 aa13.68□□□□□ -0.22
VPS26A-202ENST00000373382 ARL17AQ8IVW1 177 aa13.68□□□□□ -0.22
VPS26A-202ENST00000373382 NPBQ8NG41 125 aa13.68□□□□□ -0.22
VPS26A-202ENST00000373382 SCGB3A1Q96QR1 104 aa13.68□□□□□ -0.22
VPS26A-202ENST00000373382 VKORC1Q9BQB6 163 aa13.68□□□□□ -0.22
VPS26A-202ENST00000373382 TIMD4Q96H15 378 aa13.68□□□□□ -0.22
VPS26A-202ENST00000373382 SPAG8Q99932 426 aaPredicted RBP13.68□□□□□ -0.22
VPS26A-202ENST00000373382 IGF1P05019 195 aa13.67□□□□□ -0.22
VPS26A-202ENST00000373382 TM2D2Q9BX73 214 aa13.67□□□□□ -0.22
VPS26A-202ENST00000373382 SPANXB1Q9NS25 103 aaPredicted RBP13.67□□□□□ -0.22
VPS26A-202ENST00000373382 PTPRQQ9UMZ3 2332 aa13.67□□□□□ -0.22
VPS26A-202ENST00000373382 E9PLD3 99 aa13.67□□□□□ -0.22
VPS26A-202ENST00000373382 SMPXQ9UHP9 88 aa13.67□□□□□ -0.22
VPS26A-202ENST00000373382 CIDEAO60543 219 aa13.66□□□□□ -0.22
VPS26A-202ENST00000373382 SRSF1Q07955 248 aaKnown RBP eCLIP13.66□□□□□ -0.22
VPS26A-202ENST00000373382 LINC01559Q495D7 138 aa13.66□□□□□ -0.22
VPS26A-202ENST00000373382 CD300EQ496F6 205 aaPredicted RBP13.66□□□□□ -0.22
VPS26A-202ENST00000373382 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.66□□□□□ -0.22
VPS26A-202ENST00000373382 Q8NA96 180 aa13.66□□□□□ -0.22
VPS26A-202ENST00000373382 ZNF502Q8TBZ5 544 aa13.66□□□□□ -0.22
VPS26A-202ENST00000373382 IGHV7-81A0A0B4J1V7 117 aa13.66□□□□□ -0.22
VPS26A-202ENST00000373382 RPL11P62913 178 aaKnown RBP13.66□□□□□ -0.22
VPS26A-202ENST00000373382 SRSF9Q13242 221 aaKnown RBP eCLIP13.66□□□□□ -0.22
VPS26A-202ENST00000373382 A0A087WX48 190 aa13.66□□□□□ -0.22
VPS26A-202ENST00000373382 BUB3O43684 328 aa13.66□□□□□ -0.22
VPS26A-202ENST00000373382 MRPL16Q9NX20 251 aaKnown RBP13.66□□□□□ -0.22
VPS26A-202ENST00000373382 IGF2RP11717 2491 aa13.65□□□□□ -0.22
VPS26A-202ENST00000373382 C14orf178Q8N769 122 aaPredicted RBP13.65□□□□□ -0.22
VPS26A-202ENST00000373382 ZNF418Q8TF45 676 aaPredicted RBP13.65□□□□□ -0.22
VPS26A-202ENST00000373382 GLMPQ8WWB7 406 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms