RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 IGKV2-29A2NJV5 120 aaPredicted RBP7.76□□□□□ -1.17
COL4A6-202ENST00000372216 DNAJC30Q96LL9 226 aa7.76□□□□□ -1.17
COL4A6-202ENST00000372216 C1orf194Q5T5A4 169 aa7.76□□□□□ -1.17
COL4A6-202ENST00000372216 C9orf153Q5TBE3 101 aa7.76□□□□□ -1.17
COL4A6-202ENST00000372216 STPG4Q8N801 248 aa7.76□□□□□ -1.17
COL4A6-202ENST00000372216 DSCR8Q96T75 97 aa7.76□□□□□ -1.17
COL4A6-202ENST00000372216 ESPL1Q14674 2120 aa7.76□□□□□ -1.17
COL4A6-202ENST00000372216 IGHV1OR15-1A0A075B7D0 117 aa7.76□□□□□ -1.17
COL4A6-202ENST00000372216 H3BRN7 92 aa7.76□□□□□ -1.17
COL4A6-202ENST00000372216 IGHV4-38-2P0DP08 117 aa7.76□□□□□ -1.17
COL4A6-202ENST00000372216 C1orf147Q96MC9 270 aaPredicted RBP7.76□□□□□ -1.17
COL4A6-202ENST00000372216 CHAC1Q9BUX1 264 aa7.76□□□□□ -1.17
COL4A6-202ENST00000372216 SMPXQ9UHP9 88 aa7.75□□□□□ -1.17
COL4A6-202ENST00000372216 MYO7BQ6PIF6 2116 aa7.75□□□□□ -1.17
COL4A6-202ENST00000372216 IGHV7-4-1A0A0J9YVY3 117 aa7.75□□□□□ -1.17
COL4A6-202ENST00000372216 HIST1H2BKO60814 126 aa7.75□□□□□ -1.17
COL4A6-202ENST00000372216 HIST1H2BJP06899 126 aa7.75□□□□□ -1.17
COL4A6-202ENST00000372216 GP9P14770 177 aa7.75□□□□□ -1.17
COL4A6-202ENST00000372216 HIST1H2BOP23527 126 aa7.75□□□□□ -1.17
COL4A6-202ENST00000372216 HIST1H2BBP33778 126 aa7.75□□□□□ -1.17
COL4A6-202ENST00000372216 HIST1H2BDP58876 126 aa7.75□□□□□ -1.17
COL4A6-202ENST00000372216 HIST1H2BCP62807 126 aa7.75□□□□□ -1.17
COL4A6-202ENST00000372216 SEC11AP67812 179 aa7.75□□□□□ -1.17
COL4A6-202ENST00000372216 HIST2H2BEQ16778 126 aa7.75□□□□□ -1.17
COL4A6-202ENST00000372216 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.75□□□□□ -1.17
COL4A6-202ENST00000372216 HIST1H2BHQ93079 126 aa7.75□□□□□ -1.17
COL4A6-202ENST00000372216 HIST1H2BNQ99877 126 aa7.75□□□□□ -1.17
COL4A6-202ENST00000372216 HIST1H2BMQ99879 126 aa7.75□□□□□ -1.17
COL4A6-202ENST00000372216 HEATR1Q9H583 2144 aaKnown RBP7.75□□□□□ -1.17
COL4A6-202ENST00000372216 TRBV19A0A075B6N1 114 aa7.75□□□□□ -1.17
COL4A6-202ENST00000372216 PFN1P07737 140 aaKnown RBP7.75□□□□□ -1.17
COL4A6-202ENST00000372216 C4orf48Q5BLP8 95 aa7.75□□□□□ -1.17
COL4A6-202ENST00000372216 GTSF1LQ9H1H1 148 aa7.75□□□□□ -1.17
COL4A6-202ENST00000372216 MRPL27Q9P0M9 148 aaKnown RBP7.75□□□□□ -1.17
COL4A6-202ENST00000372216 UBE2AP49459 152 aa7.75□□□□□ -1.17
COL4A6-202ENST00000372216 WT1-ASQ06250 92 aa7.75□□□□□ -1.17
COL4A6-202ENST00000372216 ZFAND6Q6FIF0 208 aa7.75□□□□□ -1.17
COL4A6-202ENST00000372216 NPBQ8NG41 125 aa7.75□□□□□ -1.17
COL4A6-202ENST00000372216 FAM186AA6NE01 2351 aa7.74□□□□□ -1.17
COL4A6-202ENST00000372216 FANCD2OSQ96PS1 177 aa7.74□□□□□ -1.17
COL4A6-202ENST00000372216 H3BUA1 57 aa7.74□□□□□ -1.17
COL4A6-202ENST00000372216 HIST2H2BDQ6DRA6 164 aa7.74□□□□□ -1.17
COL4A6-202ENST00000372216 SIGMAR1Q99720 223 aa7.74□□□□□ -1.17
COL4A6-202ENST00000372216 U3KQE9 123 aa7.74□□□□□ -1.17
COL4A6-202ENST00000372216 C2orf16Q68DN1 1984 aa7.74□□□□□ -1.17
COL4A6-202ENST00000372216 MPDZO75970 2070 aa7.74□□□□□ -1.17
COL4A6-202ENST00000372216 PLA2G5P39877 138 aa7.74□□□□□ -1.17
COL4A6-202ENST00000372216 C11orf53Q8IXP5 236 aa7.74□□□□□ -1.17
COL4A6-202ENST00000372216 RNF138Q8WVD3 245 aa7.74□□□□□ -1.17
COL4A6-202ENST00000372216 NCR3O14931 201 aa7.74□□□□□ -1.17
COL4A6-202ENST00000372216 PROP1O75360 226 aa7.74□□□□□ -1.17
COL4A6-202ENST00000372216 IGLV3-1P01715 115 aa7.74□□□□□ -1.17
COL4A6-202ENST00000372216 CDKN1BP46527 198 aa7.74□□□□□ -1.17
COL4A6-202ENST00000372216 CCL18P55774 89 aa7.74□□□□□ -1.17
COL4A6-202ENST00000372216 LINC01559Q495D7 138 aa7.74□□□□□ -1.17
COL4A6-202ENST00000372216 GFRA4Q9GZZ7 299 aa7.74□□□□□ -1.17
COL4A6-202ENST00000372216 SOCS3O14543 225 aa7.73□□□□□ -1.17
COL4A6-202ENST00000372216 HSD52Q0P140 79 aa7.73□□□□□ -1.17
COL4A6-202ENST00000372216 C9orf66Q5T8R8 295 aa7.73□□□□□ -1.17
COL4A6-202ENST00000372216 BAALCQ8WXS3 180 aa7.73□□□□□ -1.17
COL4A6-202ENST00000372216 LTBP2Q14767 1821 aa7.73□□□□□ -1.17
COL4A6-202ENST00000372216 HIST2H2BCQ6DN03 193 aa7.73□□□□□ -1.17
COL4A6-202ENST00000372216 GTSF1Q8WW33 167 aa7.73□□□□□ -1.17
COL4A6-202ENST00000372216 HLA-DMBP28068 263 aa7.73□□□□□ -1.17
COL4A6-202ENST00000372216 EP300Q09472 2414 aaPredicted RBP7.73□□□□□ -1.17
COL4A6-202ENST00000372216 C1orf43Q9BWL3 253 aa7.73□□□□□ -1.17
COL4A6-202ENST00000372216 GNRH2O43555 120 aa7.73□□□□□ -1.17
COL4A6-202ENST00000372216 TRBV24-1A0A075B6N3 115 aa7.72□□□□□ -1.17
COL4A6-202ENST00000372216 C10orf105Q8TEF2 133 aa7.72□□□□□ -1.17
COL4A6-202ENST00000372216 RHODO00212 210 aa7.72□□□□□ -1.17
COL4A6-202ENST00000372216 IGHG4P01861 327 aa7.72□□□□□ -1.17
COL4A6-202ENST00000372216 C5orf38Q86SI9 138 aa7.72□□□□□ -1.17
COL4A6-202ENST00000372216 GYPEP15421 78 aa7.72□□□□□ -1.17
COL4A6-202ENST00000372216 MPV17L2Q567V2 206 aa7.72□□□□□ -1.17
COL4A6-202ENST00000372216 C8orf31Q8N9H6 132 aa7.72□□□□□ -1.17
COL4A6-202ENST00000372216 CENPVL3A0A0U1RRI6 287 aa7.72□□□□□ -1.17
COL4A6-202ENST00000372216 NDUFAF3Q9BU61 184 aa7.72□□□□□ -1.17
COL4A6-202ENST00000372216 ADAMTS9Q9P2N4 1935 aa7.72□□□□□ -1.17
COL4A6-202ENST00000372216 SRSF2Q01130 221 aaKnown RBP7.72□□□□□ -1.17
COL4A6-202ENST00000372216 ZC2HC1BQ5TFG8 222 aa7.72□□□□□ -1.17
COL4A6-202ENST00000372216 OR11H6Q8NGC7 330 aa7.72□□□□□ -1.17
COL4A6-202ENST00000372216 COL4A4P53420 1690 aaPredicted RBP7.71□□□□□ -1.17
COL4A6-202ENST00000372216 PRORYQ9H606 182 aa7.71□□□□□ -1.17
COL4A6-202ENST00000372216 ZNF492Q9P255 531 aa7.71□□□□□ -1.17
COL4A6-202ENST00000372216 DENND4CQ5VZ89 1909 aa7.71□□□□□ -1.17
COL4A6-202ENST00000372216 IGHV1-24A0A0C4DH33 117 aa7.71□□□□□ -1.17
COL4A6-202ENST00000372216 ETDCA0A1B0GVM5 59 aa7.71□□□□□ -1.18
COL4A6-202ENST00000372216 C15orf53Q8NAA6 179 aa7.71□□□□□ -1.18
COL4A6-202ENST00000372216 TMEM14CQ9P0S9 112 aa7.71□□□□□ -1.18
COL4A6-202ENST00000372216 DAZAP2Q15038 168 aaPredicted RBP7.71□□□□□ -1.18
COL4A6-202ENST00000372216 PRSS46E5RG02 174 aa7.71□□□□□ -1.18
COL4A6-202ENST00000372216 OVOL2Q9BRP0 275 aa7.71□□□□□ -1.18
COL4A6-202ENST00000372216 LRRK1Q38SD2 2015 aa7.71□□□□□ -1.18
COL4A6-202ENST00000372216 PLXNB3Q9ULL4 1909 aa7.7□□□□□ -1.18
COL4A6-202ENST00000372216 DEFB135Q30KP9 77 aa7.7□□□□□ -1.18
COL4A6-202ENST00000372216 C9orf47Q6ZRZ4 202 aa7.7□□□□□ -1.18
COL4A6-202ENST00000372216 KIR3DS1Q14943 382 aa7.7□□□□□ -1.18
COL4A6-202ENST00000372216 CAMK2N2Q96S95 79 aa7.7□□□□□ -1.18
COL4A6-202ENST00000372216 WIPF3A6NGB9 483 aa7.7□□□□□ -1.18
COL4A6-202ENST00000372216 FOXE3Q13461 319 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms