RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 FAM240AA0A1B0GVK7 77 aa12.39□□□□□ -0.43
GTF3C4-201ENST00000372146 FAM27E3Q08E93 113 aa12.39□□□□□ -0.43
GTF3C4-201ENST00000372146 CHCHD2Q9Y6H1 151 aaPredicted RBP12.39□□□□□ -0.43
GTF3C4-201ENST00000372146 PTPRBP23467 1997 aa12.39□□□□□ -0.43
GTF3C4-201ENST00000372146 TRBV19A0A075B6N1 114 aa12.39□□□□□ -0.43
GTF3C4-201ENST00000372146 SDHAF1A6NFY7 115 aa12.39□□□□□ -0.43
GTF3C4-201ENST00000372146 LYPD6BQ8NI32 183 aa12.39□□□□□ -0.43
GTF3C4-201ENST00000372146 NRXN2Q9P2S2 1712 aa12.39□□□□□ -0.43
GTF3C4-201ENST00000372146 PRR19A6NJB7 356 aa12.39□□□□□ -0.43
GTF3C4-201ENST00000372146 TFF2Q03403 129 aa12.39□□□□□ -0.43
GTF3C4-201ENST00000372146 VSIG2Q96IQ7 327 aa12.39□□□□□ -0.43
GTF3C4-201ENST00000372146 IGHV3-38A0A0C4DH36 116 aa12.39□□□□□ -0.43
GTF3C4-201ENST00000372146 NDUFS7O75251 213 aa12.38□□□□□ -0.43
GTF3C4-201ENST00000372146 EFNA4P52798 201 aa12.38□□□□□ -0.43
GTF3C4-201ENST00000372146 ASPHD1Q5U4P2 390 aa12.38□□□□□ -0.43
GTF3C4-201ENST00000372146 COX7B2Q8TF08 81 aa12.38□□□□□ -0.43
GTF3C4-201ENST00000372146 WBP1Q96G27 269 aa12.38□□□□□ -0.43
GTF3C4-201ENST00000372146 VWC2Q2TAL6 325 aa12.38□□□□□ -0.43
GTF3C4-201ENST00000372146 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.38□□□□□ -0.43
GTF3C4-201ENST00000372146 DEFB125Q8N687 156 aa12.38□□□□□ -0.43
GTF3C4-201ENST00000372146 C22orf46C9J442 243 aa12.38□□□□□ -0.43
GTF3C4-201ENST00000372146 C9JQL5 133 aa12.38□□□□□ -0.43
GTF3C4-201ENST00000372146 IGKV1-5P01602 117 aa12.38□□□□□ -0.43
GTF3C4-201ENST00000372146 NDUFV3P56181 108 aaKnown RBP12.38□□□□□ -0.43
GTF3C4-201ENST00000372146 MLST8Q9BVC4 326 aa12.38□□□□□ -0.43
GTF3C4-201ENST00000372146 CGB7P0DN87 165 aa12.38□□□□□ -0.43
GTF3C4-201ENST00000372146 VMO1Q7Z5L0 202 aa12.38□□□□□ -0.43
GTF3C4-201ENST00000372146 CMC4P56277 68 aaPredicted RBP12.38□□□□□ -0.43
GTF3C4-201ENST00000372146 CEP192Q8TEP8 1941 aa12.37□□□□□ -0.43
GTF3C4-201ENST00000372146 HS3ST6Q96QI5 342 aa12.37□□□□□ -0.43
GTF3C4-201ENST00000372146 KLK9Q9UKQ9 250 aa12.37□□□□□ -0.43
GTF3C4-201ENST00000372146 TGFBR3LH3BV60 316 aa12.37□□□□□ -0.43
GTF3C4-201ENST00000372146 FOXI1Q12951 378 aa12.37□□□□□ -0.43
GTF3C4-201ENST00000372146 V9GYV3 84 aa12.37□□□□□ -0.43
GTF3C4-201ENST00000372146 WFDC2Q14508 124 aa12.37□□□□□ -0.43
GTF3C4-201ENST00000372146 DSCAMO60469 2012 aa12.37□□□□□ -0.43
GTF3C4-201ENST00000372146 ATP1A1-AS1Q5TC04 95 aa12.36□□□□□ -0.43
GTF3C4-201ENST00000372146 LILRA6Q6PI73 481 aa12.36□□□□□ -0.43
GTF3C4-201ENST00000372146 THSD7AQ9UPZ6 1657 aa12.36□□□□□ -0.43
GTF3C4-201ENST00000372146 NDUFC2-KCTD14E9PQ53 114 aa12.36□□□□□ -0.43
GTF3C4-201ENST00000372146 UCNP55089 124 aa12.36□□□□□ -0.43
GTF3C4-201ENST00000372146 LYPD6Q86Y78 171 aa12.36□□□□□ -0.43
GTF3C4-201ENST00000372146 NTN3O00634 580 aaPredicted RBP12.36□□□□□ -0.43
GTF3C4-201ENST00000372146 LHFPL1Q86WI0 220 aa12.36□□□□□ -0.43
GTF3C4-201ENST00000372146 C15orf62A8K5M9 175 aa12.36□□□□□ -0.43
GTF3C4-201ENST00000372146 NREPQ16612 68 aa12.36□□□□□ -0.43
GTF3C4-201ENST00000372146 ABCA2Q9BZC7 2435 aa12.35□□□□□ -0.43
GTF3C4-201ENST00000372146 IGHV1-3A0A0C4DH29 117 aa12.35□□□□□ -0.43
GTF3C4-201ENST00000372146 ZNF492Q9P255 531 aa12.35□□□□□ -0.43
GTF3C4-201ENST00000372146 H0YJW9 148 aa12.35□□□□□ -0.43
GTF3C4-201ENST00000372146 K7EMI3 77 aa12.35□□□□□ -0.43
GTF3C4-201ENST00000372146 ZCCHC24Q8N2G6 241 aaKnown RBP12.35□□□□□ -0.43
GTF3C4-201ENST00000372146 RNF152Q8N8N0 203 aa12.35□□□□□ -0.43
GTF3C4-201ENST00000372146 IGHV4OR15-8A0A075B7B6 117 aa12.34□□□□□ -0.43
GTF3C4-201ENST00000372146 A0A087WW49 117 aa12.34□□□□□ -0.43
GTF3C4-201ENST00000372146 TMEM200BQ69YZ2 307 aa12.34□□□□□ -0.43
GTF3C4-201ENST00000372146 FAM223BA6NKX1 122 aa12.34□□□□□ -0.43
GTF3C4-201ENST00000372146 ATP5G1P05496 136 aa12.34□□□□□ -0.43
GTF3C4-201ENST00000372146 FAM223AQ8IWN6 122 aa12.34□□□□□ -0.43
GTF3C4-201ENST00000372146 F5H768 121 aa12.34□□□□□ -0.43
GTF3C4-201ENST00000372146 LYPD3O95274 346 aa12.34□□□□□ -0.43
GTF3C4-201ENST00000372146 UBE2BP63146 152 aa12.34□□□□□ -0.43
GTF3C4-201ENST00000372146 TMEM61Q8N0U2 210 aa12.34□□□□□ -0.43
GTF3C4-201ENST00000372146 SIGLEC9Q9Y336 463 aa12.34□□□□□ -0.43
GTF3C4-201ENST00000372146 KIR2DL5BA0A0G2JN68 375 aa12.34□□□□□ -0.43
GTF3C4-201ENST00000372146 KIR2DL5BA0A0G2JPC4 375 aa12.34□□□□□ -0.43
GTF3C4-201ENST00000372146 C10orf91Q5T1B1 145 aa12.34□□□□□ -0.43
GTF3C4-201ENST00000372146 KIR2DL5AQ8N109 375 aa12.34□□□□□ -0.43
GTF3C4-201ENST00000372146 TRAV23DV6A0A075B6W5 121 aa12.34□□□□□ -0.43
GTF3C4-201ENST00000372146 DYNAPQ8N1N2 210 aa12.34□□□□□ -0.43
GTF3C4-201ENST00000372146 SPINK13Q1W4C9 94 aa12.33□□□□□ -0.43
GTF3C4-201ENST00000372146 Q9H8V8 135 aa12.33□□□□□ -0.43
GTF3C4-201ENST00000372146 IGLL5B9A064 214 aa12.33□□□□□ -0.44
GTF3C4-201ENST00000372146 IGLC1P0CG04 106 aa12.33□□□□□ -0.44
GTF3C4-201ENST00000372146 FNDC1Q4ZHG4 1894 aaPredicted RBP12.33□□□□□ -0.44
GTF3C4-201ENST00000372146 LINC00473A8K010 186 aa12.33□□□□□ -0.44
GTF3C4-201ENST00000372146 NDUFB1O75438 58 aa12.33□□□□□ -0.44
GTF3C4-201ENST00000372146 LINC01545Q5VT33 79 aa12.33□□□□□ -0.44
GTF3C4-201ENST00000372146 MRPL14Q6P1L8 145 aaKnown RBP12.33□□□□□ -0.44
GTF3C4-201ENST00000372146 FOXE3Q13461 319 aa12.33□□□□□ -0.44
GTF3C4-201ENST00000372146 C5orf64Q2M2E5 130 aa12.33□□□□□ -0.44
GTF3C4-201ENST00000372146 CFPP27918 469 aa12.33□□□□□ -0.44
GTF3C4-201ENST00000372146 XCL1P47992 114 aa12.33□□□□□ -0.44
GTF3C4-201ENST00000372146 SMIM10L1P0DMW3 83 aa12.32□□□□□ -0.44
GTF3C4-201ENST00000372146 SMIM10Q96HG1 83 aa12.32□□□□□ -0.44
GTF3C4-201ENST00000372146 ZC2HC1AQ96GY0 325 aa12.32□□□□□ -0.44
GTF3C4-201ENST00000372146 MST1LQ2TV78 715 aa12.32□□□□□ -0.44
GTF3C4-201ENST00000372146 TIAF1O95411 115 aa12.32□□□□□ -0.44
GTF3C4-201ENST00000372146 LINC00114Q6XXX2 140 aa12.32□□□□□ -0.44
GTF3C4-201ENST00000372146 SHANK2-AS3Q9BTD1 123 aa12.32□□□□□ -0.44
GTF3C4-201ENST00000372146 KLHL30-AS1Q8NEE0 82 aa12.32□□□□□ -0.44
GTF3C4-201ENST00000372146 CXCL5P42830 114 aa12.32□□□□□ -0.44
GTF3C4-201ENST00000372146 SPANXB1Q9NS25 103 aaPredicted RBP12.32□□□□□ -0.44
GTF3C4-201ENST00000372146 UNQ6494/PRO21346Q6UXR6 183 aa12.31□□□□□ -0.44
GTF3C4-201ENST00000372146 DAZ1Q9NQZ3 744 aaKnown RBP12.31□□□□□ -0.44
GTF3C4-201ENST00000372146 FAM236DA0A1B0GTK5 79 aa12.31□□□□□ -0.44
GTF3C4-201ENST00000372146 LGALS9O00182 355 aa12.31□□□□□ -0.44
GTF3C4-201ENST00000372146 FAM236CP0DP71 79 aa12.31□□□□□ -0.44
GTF3C4-201ENST00000372146 USMG5Q96IX5 58 aa12.31□□□□□ -0.44
GTF3C4-201ENST00000372146 UPK3BQ9BT76 320 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms