RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 CRLF1O75462 422 aa17.53■□□□□ 0.4
TM9SF3-201ENST00000371142 SMIM2Q9BVW6 85 aa17.53■□□□□ 0.4
TM9SF3-201ENST00000371142 C9orf118A6NHY6 69 aa17.52■□□□□ 0.4
TM9SF3-201ENST00000371142 J3QKU1 62 aa17.52■□□□□ 0.4
TM9SF3-201ENST00000371142 ARFGEF3Q5TH69 2177 aa17.52■□□□□ 0.4
TM9SF3-201ENST00000371142 INAFM2P0DMQ5 153 aa17.52■□□□□ 0.39
TM9SF3-201ENST00000371142 HAMPP81172 84 aa17.52■□□□□ 0.39
TM9SF3-201ENST00000371142 RSPO3Q9BXY4 272 aaPredicted RBP17.51■□□□□ 0.39
TM9SF3-201ENST00000371142 A0A0J9YY99 117 aa17.51■□□□□ 0.39
TM9SF3-201ENST00000371142 PLA2G2CQ5R387 149 aa17.51■□□□□ 0.39
TM9SF3-201ENST00000371142 LGALS9BQ3B8N2 356 aa17.51■□□□□ 0.39
TM9SF3-201ENST00000371142 LGALS9CQ6DKI2 356 aa17.51■□□□□ 0.39
TM9SF3-201ENST00000371142 GNRH2O43555 120 aa17.5■□□□□ 0.39
TM9SF3-201ENST00000371142 NDUFS7O75251 213 aa17.5■□□□□ 0.39
TM9SF3-201ENST00000371142 OR11H6Q8NGC7 330 aa17.5■□□□□ 0.39
TM9SF3-201ENST00000371142 TRBV20-1A0A075B6N2 111 aa17.5■□□□□ 0.39
TM9SF3-201ENST00000371142 ARTNQ5T4W7 220 aa17.5■□□□□ 0.39
TM9SF3-201ENST00000371142 NOP10Q9NPE3 64 aaKnown RBP17.5■□□□□ 0.39
TM9SF3-201ENST00000371142 IGLL1P15814 213 aa17.5■□□□□ 0.39
TM9SF3-201ENST00000371142 C9orf153Q5TBE3 101 aa17.5■□□□□ 0.39
TM9SF3-201ENST00000371142 MRAPQ8TCY5 172 aa17.5■□□□□ 0.39
TM9SF3-201ENST00000371142 IGLC2P0DOY2 106 aa17.49■□□□□ 0.39
TM9SF3-201ENST00000371142 IGLC3P0DOY3 106 aa17.49■□□□□ 0.39
TM9SF3-201ENST00000371142 COX8AP10176 69 aa17.49■□□□□ 0.39
TM9SF3-201ENST00000371142 CADP27708 2225 aa17.49■□□□□ 0.39
TM9SF3-201ENST00000371142 K7EM74 188 aa17.49■□□□□ 0.39
TM9SF3-201ENST00000371142 DEFB112Q30KQ8 113 aa17.49■□□□□ 0.39
TM9SF3-201ENST00000371142 ZNF491Q8N8L2 437 aa17.49■□□□□ 0.39
TM9SF3-201ENST00000371142 CITED2Q99967 270 aaPredicted RBP17.49■□□□□ 0.39
TM9SF3-201ENST00000371142 C22orf46C9J442 243 aa17.49■□□□□ 0.39
TM9SF3-201ENST00000371142 MRPL53Q96EL3 112 aaKnown RBP17.49■□□□□ 0.39
TM9SF3-201ENST00000371142 DOCK7Q96N67 2140 aa17.49■□□□□ 0.39
TM9SF3-201ENST00000371142 IGHV4-59P01825 116 aa17.48■□□□□ 0.39
TM9SF3-201ENST00000371142 DYNAPQ8N1N2 210 aa17.48■□□□□ 0.39
TM9SF3-201ENST00000371142 K7ERJ3 54 aa17.48■□□□□ 0.39
TM9SF3-201ENST00000371142 GRNP28799 593 aaKnown RBP17.48■□□□□ 0.39
TM9SF3-201ENST00000371142 CEND1Q8N111 149 aa17.48■□□□□ 0.39
TM9SF3-201ENST00000371142 CACNA1GO43497 2377 aa17.48■□□□□ 0.39
TM9SF3-201ENST00000371142 ELANEP08246 267 aa17.48■□□□□ 0.39
TM9SF3-201ENST00000371142 TRAV12-1A0A0B4J245 112 aa17.48■□□□□ 0.39
TM9SF3-201ENST00000371142 HERVK_113P63121 156 aa17.48■□□□□ 0.39
TM9SF3-201ENST00000371142 DEFB136Q30KP8 78 aa17.48■□□□□ 0.39
TM9SF3-201ENST00000371142 FOXE3Q13461 319 aa17.48■□□□□ 0.39
TM9SF3-201ENST00000371142 TAL2Q16559 108 aa17.47■□□□□ 0.39
TM9SF3-201ENST00000371142 UBL5Q9BZL1 73 aa17.47■□□□□ 0.39
TM9SF3-201ENST00000371142 SPRY2O43597 315 aa17.47■□□□□ 0.39
TM9SF3-201ENST00000371142 CFHR4Q92496 578 aa17.47■□□□□ 0.39
TM9SF3-201ENST00000371142 F8VRH5 84 aa17.46■□□□□ 0.39
TM9SF3-201ENST00000371142 DKK2Q9UBU2 259 aa17.46■□□□□ 0.39
TM9SF3-201ENST00000371142 XCL1P47992 114 aa17.46■□□□□ 0.39
TM9SF3-201ENST00000371142 RMI2Q96E14 147 aa17.46■□□□□ 0.39
TM9SF3-201ENST00000371142 J3QQQ9 107 aa17.46■□□□□ 0.39
TM9SF3-201ENST00000371142 K7EN84 100 aa17.46■□□□□ 0.39
TM9SF3-201ENST00000371142 LTAP01374 205 aa17.46■□□□□ 0.39
TM9SF3-201ENST00000371142 IGHV2-5P01817 119 aa17.46■□□□□ 0.39
TM9SF3-201ENST00000371142 TSSC4Q9Y5U2 329 aaPredicted RBP17.46■□□□□ 0.39
TM9SF3-201ENST00000371142 SHISA9B4DS77 424 aa17.46■□□□□ 0.39
TM9SF3-201ENST00000371142 DSCR8Q96T75 97 aa17.46■□□□□ 0.39
TM9SF3-201ENST00000371142 CTSZQ9UBR2 303 aa17.46■□□□□ 0.39
TM9SF3-201ENST00000371142 PRO1854Q9UHT4 67 aa17.46■□□□□ 0.39
TM9SF3-201ENST00000371142 WDR81Q562E7 1941 aa17.45■□□□□ 0.38
TM9SF3-201ENST00000371142 IGKV1OR2-108A0A075B7D4 117 aa17.45■□□□□ 0.38
TM9SF3-201ENST00000371142 Q6ZQT7 251 aa17.45■□□□□ 0.38
TM9SF3-201ENST00000371142 U3KQE9 123 aa17.45■□□□□ 0.38
TM9SF3-201ENST00000371142 ACACAQ13085 2346 aa17.45■□□□□ 0.38
TM9SF3-201ENST00000371142 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.45■□□□□ 0.38
TM9SF3-201ENST00000371142 IGKV2-29A2NJV5 120 aaPredicted RBP17.45■□□□□ 0.38
TM9SF3-201ENST00000371142 DOCK10Q96BY6 2186 aa17.45■□□□□ 0.38
TM9SF3-201ENST00000371142 PYGO2Q9BRQ0 406 aa17.45■□□□□ 0.38
TM9SF3-201ENST00000371142 TINCRA0A1B0GVN0 87 aa17.44■□□□□ 0.38
TM9SF3-201ENST00000371142 PPDPFLQ8WWR9 84 aa17.44■□□□□ 0.38
TM9SF3-201ENST00000371142 BVES-AS1Q5T3Y7 98 aa17.44■□□□□ 0.38
TM9SF3-201ENST00000371142 FOXI2Q6ZQN5 318 aa17.44■□□□□ 0.38
TM9SF3-201ENST00000371142 DIDO1Q9BTC0 2240 aaKnown RBP17.44■□□□□ 0.38
TM9SF3-201ENST00000371142 IGKV2D-24A0A075B6R9 120 aa17.44■□□□□ 0.38
TM9SF3-201ENST00000371142 IGLV2-23P01705 113 aa17.44■□□□□ 0.38
TM9SF3-201ENST00000371142 ETDBQ3ZM63 59 aa17.44■□□□□ 0.38
TM9SF3-201ENST00000371142 CARD19Q96LW7 228 aa17.44■□□□□ 0.38
TM9SF3-201ENST00000371142 SPRNQ5BIV9 151 aa17.44■□□□□ 0.38
TM9SF3-201ENST00000371142 KAAG1Q9UBP8 84 aa17.43■□□□□ 0.38
TM9SF3-201ENST00000371142 ROS1P08922 2347 aa17.43■□□□□ 0.38
TM9SF3-201ENST00000371142 HELZP42694 1942 aaKnown RBP17.43■□□□□ 0.38
TM9SF3-201ENST00000371142 TRAV13-2A0A0B4J235 113 aa17.43■□□□□ 0.38
TM9SF3-201ENST00000371142 C20orf78Q9BR46 151 aa17.43■□□□□ 0.38
TM9SF3-201ENST00000371142 NCOR1O75376 2440 aa17.43■□□□□ 0.38
TM9SF3-201ENST00000371142 VPREB3Q9UKI3 123 aa17.43■□□□□ 0.38
TM9SF3-201ENST00000371142 DOCK8Q8NF50 2099 aa17.43■□□□□ 0.38
TM9SF3-201ENST00000371142 MYLKQ15746 1914 aa17.43■□□□□ 0.38
TM9SF3-201ENST00000371142 IGHV2-70P01814 119 aa17.42■□□□□ 0.38
TM9SF3-201ENST00000371142 EGR2P11161 476 aaPredicted RBP17.42■□□□□ 0.38
TM9SF3-201ENST00000371142 USF3Q68DE3 2245 aa17.42■□□□□ 0.38
TM9SF3-201ENST00000371142 PRR20EP86478 221 aa17.42■□□□□ 0.38
TM9SF3-201ENST00000371142 PRR20CP86479 221 aa17.42■□□□□ 0.38
TM9SF3-201ENST00000371142 PRR20DP86480 221 aa17.42■□□□□ 0.38
TM9SF3-201ENST00000371142 PRR20BP86481 221 aa17.42■□□□□ 0.38
TM9SF3-201ENST00000371142 PRR20AP86496 221 aa17.42■□□□□ 0.38
TM9SF3-201ENST00000371142 APRG1Q8IVJ8 170 aa17.42■□□□□ 0.38
TM9SF3-201ENST00000371142 DOCK11Q5JSL3 2073 aa17.42■□□□□ 0.38
TM9SF3-201ENST00000371142 IGLC7A0M8Q6 106 aa17.42■□□□□ 0.38
TM9SF3-201ENST00000371142 RHOHQ15669 191 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms