RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 DUSP14O95147 198 aaKnown RBP17.75■□□□□ 0.43
SNX3-203ENST00000368979 CRISP2P16562 243 aa17.75■□□□□ 0.43
SNX3-203ENST00000368979 APRG1Q8IVJ8 170 aa17.75■□□□□ 0.43
SNX3-203ENST00000368979 ODF3Q96PU9 254 aa17.75■□□□□ 0.43
SNX3-203ENST00000368979 WNK1Q9H4A3 2382 aa17.74■□□□□ 0.43
SNX3-203ENST00000368979 PRR9Q5T870 116 aa17.74■□□□□ 0.43
SNX3-203ENST00000368979 TENM1Q9UKZ4 2725 aa17.74■□□□□ 0.43
SNX3-203ENST00000368979 A0A1W2PPQ1 181 aa17.73■□□□□ 0.43
SNX3-203ENST00000368979 ODF3L2Q3SX64 289 aa17.73■□□□□ 0.43
SNX3-203ENST00000368979 OR2D3Q8NGH3 330 aa17.73■□□□□ 0.43
SNX3-203ENST00000368979 TSKUQ8WUA8 353 aa17.73■□□□□ 0.43
SNX3-203ENST00000368979 TMEM158Q8WZ71 300 aa17.73■□□□□ 0.43
SNX3-203ENST00000368979 FABP5P3A8MUU1 101 aa17.72■□□□□ 0.43
SNX3-203ENST00000368979 HLA-DRB4P13762 266 aa17.72■□□□□ 0.43
SNX3-203ENST00000368979 INSL3P51460 131 aa17.72■□□□□ 0.43
SNX3-203ENST00000368979 HLA-DRB4X5D2U9 266 aa17.72■□□□□ 0.43
SNX3-203ENST00000368979 TRAV9-1A0A075B6T8 112 aa17.72■□□□□ 0.43
SNX3-203ENST00000368979 KNCNA6PVL3 124 aa17.72■□□□□ 0.43
SNX3-203ENST00000368979 A8MTW9 85 aa17.72■□□□□ 0.43
SNX3-203ENST00000368979 A8MWL6 223 aa17.72■□□□□ 0.43
SNX3-203ENST00000368979 RAB5AP20339 215 aa17.72■□□□□ 0.43
SNX3-203ENST00000368979 BEAN1Q3B7T3 259 aa17.72■□□□□ 0.43
SNX3-203ENST00000368979 C9orf66Q5T8R8 295 aa17.72■□□□□ 0.43
SNX3-203ENST00000368979 C12orf54Q6X4T0 127 aa17.72■□□□□ 0.43
SNX3-203ENST00000368979 C3orf56Q8N813 242 aa17.72■□□□□ 0.43
SNX3-203ENST00000368979 KLLNB2CW77 178 aa17.71■□□□□ 0.43
SNX3-203ENST00000368979 TCL1AP56279 114 aa17.71■□□□□ 0.43
SNX3-203ENST00000368979 RPL19P84098 196 aaKnown RBP17.71■□□□□ 0.43
SNX3-203ENST00000368979 ZNF124Q15973 351 aa17.71■□□□□ 0.43
SNX3-203ENST00000368979 SHISA2Q6UWI4 295 aa17.71■□□□□ 0.43
SNX3-203ENST00000368979 FAM210BQ96KR6 192 aa17.71■□□□□ 0.43
SNX3-203ENST00000368979 ACTL10Q5JWF8 245 aa17.7■□□□□ 0.42
SNX3-203ENST00000368979 AMTNQ6UX39 209 aa17.7■□□□□ 0.42
SNX3-203ENST00000368979 NEU1Q99519 415 aa17.7■□□□□ 0.42
SNX3-203ENST00000368979 GFRA4Q9GZZ7 299 aa17.7■□□□□ 0.42
SNX3-203ENST00000368979 H3BMM0 161 aa17.69■□□□□ 0.42
SNX3-203ENST00000368979 LEPP41159 167 aa17.69■□□□□ 0.42
SNX3-203ENST00000368979 WFDC9Q8NEX5 89 aa17.69■□□□□ 0.42
SNX3-203ENST00000368979 BTF3L4Q96K17 158 aa17.69■□□□□ 0.42
SNX3-203ENST00000368979 ATRQ13535 2644 aa17.69■□□□□ 0.42
SNX3-203ENST00000368979 TMEM189A5PLL7 270 aa17.68■□□□□ 0.42
SNX3-203ENST00000368979 FAM231BA6NCW3 169 aa17.68■□□□□ 0.42
SNX3-203ENST00000368979 J3KRW8 73 aa17.68■□□□□ 0.42
SNX3-203ENST00000368979 GPX1P07203 203 aa17.68■□□□□ 0.42
SNX3-203ENST00000368979 CMC4P56277 68 aaPredicted RBP17.68■□□□□ 0.42
SNX3-203ENST00000368979 LINC01559Q495D7 138 aa17.68■□□□□ 0.42
SNX3-203ENST00000368979 GTSF1Q8WW33 167 aa17.68■□□□□ 0.42
SNX3-203ENST00000368979 FAM110AQ9BQ89 295 aa17.68■□□□□ 0.42
SNX3-203ENST00000368979 NAT8BQ9UHF3 227 aa17.68■□□□□ 0.42
SNX3-203ENST00000368979 OR11H12B2RN74 326 aa17.67■□□□□ 0.42
SNX3-203ENST00000368979 IGKV3-20P01619 116 aa17.67■□□□□ 0.42
SNX3-203ENST00000368979 TYMSP04818 313 aa17.67■□□□□ 0.42
SNX3-203ENST00000368979 KIR3DS1Q14943 382 aa17.67■□□□□ 0.42
SNX3-203ENST00000368979 Q6AWC8 147 aa17.67■□□□□ 0.42
SNX3-203ENST00000368979 MCRIP2Q9BUT9 160 aaKnown RBP17.67■□□□□ 0.42
SNX3-203ENST00000368979 FBN1P35555 2871 aaKnown RBP17.67■□□□□ 0.42
SNX3-203ENST00000368979 HIGD1CA8MV81 97 aa17.67■□□□□ 0.42
SNX3-203ENST00000368979 GZMBP10144 247 aa17.67■□□□□ 0.42
SNX3-203ENST00000368979 Q6ZQT7 251 aa17.67■□□□□ 0.42
SNX3-203ENST00000368979 NUP35Q8NFH5 326 aa17.67■□□□□ 0.42
SNX3-203ENST00000368979 C11orf21Q9P2W6 132 aa17.67■□□□□ 0.42
SNX3-203ENST00000368979 TRAV21A0A0B4J279 112 aa17.66■□□□□ 0.42
SNX3-203ENST00000368979 ZNF575Q86XF7 245 aa17.66■□□□□ 0.42
SNX3-203ENST00000368979 RBMY1BA6NDE4 496 aaKnown RBP17.65■□□□□ 0.42
SNX3-203ENST00000368979 RBMY1EA6NEQ0 496 aaKnown RBP17.65■□□□□ 0.42
SNX3-203ENST00000368979 ORM1P02763 201 aa17.65■□□□□ 0.42
SNX3-203ENST00000368979 RBMY1DP0C7P1 496 aaKnown RBP17.65■□□□□ 0.42
SNX3-203ENST00000368979 RNASE4P34096 147 aaKnown RBP17.65■□□□□ 0.42
SNX3-203ENST00000368979 FOXA3P55318 350 aaPredicted RBP17.65■□□□□ 0.42
SNX3-203ENST00000368979 RPS20P60866 119 aaKnown RBP17.65■□□□□ 0.42
SNX3-203ENST00000368979 C19orf73Q9NVV2 129 aa17.65■□□□□ 0.42
SNX3-203ENST00000368979 TMSB15BA0A087X1C1 80 aa17.64■□□□□ 0.41
SNX3-203ENST00000368979 IGKV3D-20A0A0C4DH25 116 aa17.64■□□□□ 0.41
SNX3-203ENST00000368979 XKRY2A2RUG3 117 aa17.64■□□□□ 0.41
SNX3-203ENST00000368979 CD7P09564 240 aa17.64■□□□□ 0.41
SNX3-203ENST00000368979 TSPOP30536 169 aa17.64■□□□□ 0.41
SNX3-203ENST00000368979 CDKN1BP46527 198 aa17.64■□□□□ 0.41
SNX3-203ENST00000368979 CLUHP3Q96NS8 147 aa17.64■□□□□ 0.41
SNX3-203ENST00000368979 SRD5A3Q9H8P0 318 aa17.64■□□□□ 0.41
SNX3-203ENST00000368979 M0R2Z0 102 aa17.63■□□□□ 0.41
SNX3-203ENST00000368979 RPS10P46783 165 aaKnown RBP17.63■□□□□ 0.41
SNX3-203ENST00000368979 DNHD1Q96M86 4753 aa17.63■□□□□ 0.41
SNX3-203ENST00000368979 C7orf71A4D174 169 aa17.62■□□□□ 0.41
SNX3-203ENST00000368979 SPINK13Q1W4C9 94 aa17.62■□□□□ 0.41
SNX3-203ENST00000368979 GFI1BQ5VTD9 330 aa17.62■□□□□ 0.41
SNX3-203ENST00000368979 WIPF1O43516 503 aa17.61■□□□□ 0.41
SNX3-203ENST00000368979 SPINK4O60575 86 aa17.61■□□□□ 0.41
SNX3-203ENST00000368979 PGLYRP4Q96LB8 373 aa17.61■□□□□ 0.41
SNX3-203ENST00000368979 TRPT1Q86TN4 253 aaKnown RBP17.6■□□□□ 0.41
SNX3-203ENST00000368979 TMA7Q9Y2S6 64 aaKnown RBP17.6■□□□□ 0.41
SNX3-203ENST00000368979 TRAV12-2A0A075B6T6 113 aa17.59■□□□□ 0.41
SNX3-203ENST00000368979 ZNF324O75467 553 aaPredicted RBP17.59■□□□□ 0.41
SNX3-203ENST00000368979 FRMD6-AS1P0C7T7 363 aa17.59■□□□□ 0.41
SNX3-203ENST00000368979 IGLC6P0CF74 106 aa17.59■□□□□ 0.41
SNX3-203ENST00000368979 IGLL1P15814 213 aa17.59■□□□□ 0.41
SNX3-203ENST00000368979 MRPL54Q6P161 138 aaKnown RBP17.59■□□□□ 0.41
SNX3-203ENST00000368979 STHQ8IWL8 128 aa17.59■□□□□ 0.41
SNX3-203ENST00000368979 AGRNO00468 2067 aa17.59■□□□□ 0.41
SNX3-203ENST00000368979 CRXO43186 299 aaPredicted RBP17.58■□□□□ 0.41
SNX3-203ENST00000368979 ATP5L2Q7Z4Y8 100 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms