RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 ZNF331Q9NQX6 463 aaPredicted RBP6.61□□□□□ -1.35
TPM3-213ENST00000368545 BIN3Q9NQY0 253 aa6.61□□□□□ -1.35
TPM3-213ENST00000368545 CLEC5AQ9NY25 188 aa6.61□□□□□ -1.35
TPM3-213ENST00000368545 SMAD5-AS1Q9Y6J3 95 aa6.61□□□□□ -1.35
TPM3-213ENST00000368545 PKD1L1Q8TDX9 2849 aa6.6□□□□□ -1.35
TPM3-213ENST00000368545 BIRC6Q9NR09 4857 aa6.6□□□□□ -1.35
TPM3-213ENST00000368545 IGHV7-4-1A0A0J9YVY3 117 aa6.6□□□□□ -1.35
TPM3-213ENST00000368545 K7EN84 100 aa6.6□□□□□ -1.35
TPM3-213ENST00000368545 LGALS9O00182 355 aa6.6□□□□□ -1.35
TPM3-213ENST00000368545 ISLRO14498 428 aa6.6□□□□□ -1.35
TPM3-213ENST00000368545 ZNF207O43670 478 aaKnown RBP6.6□□□□□ -1.35
TPM3-213ENST00000368545 HOXA5P20719 270 aa6.6□□□□□ -1.35
TPM3-213ENST00000368545 S100PP25815 95 aa6.6□□□□□ -1.35
TPM3-213ENST00000368545 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.6□□□□□ -1.35
TPM3-213ENST00000368545 LINC00518Q8N0U6 118 aa6.6□□□□□ -1.35
TPM3-213ENST00000368545 C4orf3Q8WVX3 66 aa6.6□□□□□ -1.35
TPM3-213ENST00000368545 IMMP2LQ96T52 175 aa6.6□□□□□ -1.35
TPM3-213ENST00000368545 COLCA2A8K830 154 aa6.59□□□□□ -1.35
TPM3-213ENST00000368545 A8MWP6 167 aa6.59□□□□□ -1.35
TPM3-213ENST00000368545 GCGP01275 180 aa6.59□□□□□ -1.35
TPM3-213ENST00000368545 LTAP01374 205 aa6.59□□□□□ -1.35
TPM3-213ENST00000368545 IGLV2-8P01709 118 aa6.59□□□□□ -1.35
TPM3-213ENST00000368545 APOHP02749 345 aaPredicted RBP6.59□□□□□ -1.35
TPM3-213ENST00000368545 GOLT1AQ6ZVE7 132 aa6.59□□□□□ -1.35
TPM3-213ENST00000368545 BAGE2Q86Y30 109 aa6.59□□□□□ -1.35
TPM3-213ENST00000368545 OR10G8Q8NGN5 311 aa6.59□□□□□ -1.35
TPM3-213ENST00000368545 MRPL53Q96EL3 112 aaKnown RBP6.59□□□□□ -1.35
TPM3-213ENST00000368545 LINC00479Q96M42 142 aa6.59□□□□□ -1.35
TPM3-213ENST00000368545 YPEL4Q96NS1 127 aa6.59□□□□□ -1.35
TPM3-213ENST00000368545 IGHV3-66A0A0C4DH42 116 aa6.59□□□□□ -1.35
TPM3-213ENST00000368545 MGST1P10620 155 aaKnown RBP6.59□□□□□ -1.35
TPM3-213ENST00000368545 S100A12P80511 92 aa6.59□□□□□ -1.35
TPM3-213ENST00000368545 ELOBQ15370 118 aa6.59□□□□□ -1.35
TPM3-213ENST00000368545 PSG3Q16557 428 aa6.59□□□□□ -1.35
TPM3-213ENST00000368545 SAMD13Q5VXD3 122 aa6.59□□□□□ -1.35
TPM3-213ENST00000368545 KCNIP4Q6PIL6 250 aa6.59□□□□□ -1.35
TPM3-213ENST00000368545 CD164L2Q6UWJ8 174 aa6.59□□□□□ -1.35
TPM3-213ENST00000368545 ERASQ7Z444 233 aa6.59□□□□□ -1.35
TPM3-213ENST00000368545 Q86TA4 180 aa6.59□□□□□ -1.35
TPM3-213ENST00000368545 FAM24BQ8N5W8 94 aa6.59□□□□□ -1.35
TPM3-213ENST00000368545 BTF3L4Q96K17 158 aa6.59□□□□□ -1.35
TPM3-213ENST00000368545 C20orf173Q96LM9 149 aa6.59□□□□□ -1.35
TPM3-213ENST00000368545 IGHV4OR15-8A0A075B7B6 117 aa6.58□□□□□ -1.36
TPM3-213ENST00000368545 IGHV3OR16-13A0A075B7E8 117 aa6.58□□□□□ -1.36
TPM3-213ENST00000368545 A0A087WW49 117 aa6.58□□□□□ -1.36
TPM3-213ENST00000368545 IGHV3-49A0A0A0MS15 119 aa6.58□□□□□ -1.36
TPM3-213ENST00000368545 IGHV3-74A0A0B4J1X5 117 aa6.58□□□□□ -1.36
TPM3-213ENST00000368545 ERVFC1-1P60608 527 aa6.58□□□□□ -1.36
TPM3-213ENST00000368545 IBA57Q5T440 356 aaKnown RBP6.58□□□□□ -1.36
TPM3-213ENST00000368545 FAM231DQ6ZW35 169 aa6.58□□□□□ -1.36
TPM3-213ENST00000368545 ALKBH7Q9BT30 221 aaPredicted RBP6.58□□□□□ -1.36
TPM3-213ENST00000368545 OSTCQ9NRP0 149 aa6.58□□□□□ -1.36
TPM3-213ENST00000368545 ZFP30Q9Y2G7 519 aa6.58□□□□□ -1.36
TPM3-213ENST00000368545 URGCP-MRPS24S4R325 110 aa6.58□□□□□ -1.36
TPM3-213ENST00000368545 TRBV24-1A0A075B6N3 115 aa6.58□□□□□ -1.36
TPM3-213ENST00000368545 LINC01619G3V211 115 aa6.58□□□□□ -1.36
TPM3-213ENST00000368545 M0R3E3 92 aa6.58□□□□□ -1.36
TPM3-213ENST00000368545 FOLR2P14207 255 aa6.58□□□□□ -1.36
TPM3-213ENST00000368545 RAB5AP20339 215 aa6.58□□□□□ -1.36
TPM3-213ENST00000368545 HOXD3P31249 432 aaPredicted RBP6.58□□□□□ -1.36
TPM3-213ENST00000368545 FLI1Q01543 452 aaPredicted RBP6.58□□□□□ -1.36
TPM3-213ENST00000368545 RHPN1-AS1Q9BWJ2 59 aa6.58□□□□□ -1.36
TPM3-213ENST00000368545 SMPXQ9UHP9 88 aa6.58□□□□□ -1.36
TPM3-213ENST00000368545 TGP01266 2768 aa6.57□□□□□ -1.36
TPM3-213ENST00000368545 LCE6AA0A183 80 aa6.57□□□□□ -1.36
TPM3-213ENST00000368545 RBAKDNA6NC62 111 aa6.57□□□□□ -1.36
TPM3-213ENST00000368545 CHEK1O14757 476 aa6.57□□□□□ -1.36
TPM3-213ENST00000368545 IGLV2-11P01706 119 aa6.57□□□□□ -1.36
TPM3-213ENST00000368545 PFN1P07737 140 aaKnown RBP6.57□□□□□ -1.36
TPM3-213ENST00000368545 COTL1Q14019 142 aa6.57□□□□□ -1.36
TPM3-213ENST00000368545 TMEM183AQ8IXX5 376 aa6.57□□□□□ -1.36
TPM3-213ENST00000368545 NRN1Q9NPD7 142 aa6.57□□□□□ -1.36
TPM3-213ENST00000368545 CBY1Q9Y3M2 126 aa6.57□□□□□ -1.36
TPM3-213ENST00000368545 TRAV9-1A0A075B6T8 112 aa6.56□□□□□ -1.36
TPM3-213ENST00000368545 TMEM213A2RRL7 107 aa6.56□□□□□ -1.36
TPM3-213ENST00000368545 OR5I1Q13606 314 aa6.56□□□□□ -1.36
TPM3-213ENST00000368545 TCTEX1D4Q5JR98 221 aa6.56□□□□□ -1.36
TPM3-213ENST00000368545 PRNTQ86SH4 94 aa6.56□□□□□ -1.36
TPM3-213ENST00000368545 LINC01006Q8NI28 216 aa6.56□□□□□ -1.36
TPM3-213ENST00000368545 GPR61Q9BZJ8 451 aa6.56□□□□□ -1.36
TPM3-213ENST00000368545 ZNF492Q9P255 531 aa6.56□□□□□ -1.36
TPM3-213ENST00000368545 PSG8Q9UQ74 426 aa6.56□□□□□ -1.36
TPM3-213ENST00000368545 CUBNO60494 3623 aa6.56□□□□□ -1.36
TPM3-213ENST00000368545 TRAV8-1A0A0A6YYK1 113 aa6.56□□□□□ -1.36
TPM3-213ENST00000368545 SYNJ2BPP57105 145 aa6.56□□□□□ -1.36
TPM3-213ENST00000368545 HERV-K104P63124 156 aa6.56□□□□□ -1.36
TPM3-213ENST00000368545 KLF5Q13887 457 aaPredicted RBP6.56□□□□□ -1.36
TPM3-213ENST00000368545 LCN12Q6JVE5 192 aa6.56□□□□□ -1.36
TPM3-213ENST00000368545 KLHL30-AS1Q8NEE0 82 aa6.56□□□□□ -1.36
TPM3-213ENST00000368545 DPF1Q92782 380 aa6.56□□□□□ -1.36
TPM3-213ENST00000368545 SGK494Q96LW2 274 aa6.56□□□□□ -1.36
TPM3-213ENST00000368545 PYGO2Q9BRQ0 406 aa6.56□□□□□ -1.36
TPM3-213ENST00000368545 RNASE7Q9H1E1 156 aaKnown RBP6.56□□□□□ -1.36
TPM3-213ENST00000368545 IL36BQ9NZH7 164 aa6.56□□□□□ -1.36
TPM3-213ENST00000368545 V9GYV3 84 aa6.56□□□□□ -1.36
TPM3-213ENST00000368545 TGIF2-C20orf24A0A0A6YYL0 155 aa6.55□□□□□ -1.36
TPM3-213ENST00000368545 ZNF705GA8MUZ8 300 aaPredicted RBP6.55□□□□□ -1.36
TPM3-213ENST00000368545 CXCL1P09341 107 aa6.55□□□□□ -1.36
TPM3-213ENST00000368545 RPL19P84098 196 aaKnown RBP6.55□□□□□ -1.36
TPM3-213ENST00000368545 SAPCD1Q5SSQ6 148 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms