RNA–Protein interactions for RNA: ENST00000368393.7

MUC1-208, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 937 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-208ENST00000368393 ATG101Q9BSB4 218 aa9.36□□□□□ -0.91
MUC1-208ENST00000368393 TRAV12-3A0A0B4J271 114 aa9.35□□□□□ -0.91
MUC1-208ENST00000368393 TRAV34A0A0B4J273 112 aa9.35□□□□□ -0.91
MUC1-208ENST00000368393 TRBV6-1A0A0K0K1D8 114 aa9.35□□□□□ -0.91
MUC1-208ENST00000368393 H7BYZ3 331 aa9.35□□□□□ -0.91
MUC1-208ENST00000368393 J3KRW8 73 aa9.35□□□□□ -0.91
MUC1-208ENST00000368393 PEX7O00628 323 aa9.35□□□□□ -0.91
MUC1-208ENST00000368393 C12orf74Q32Q52 190 aa9.35□□□□□ -0.91
MUC1-208ENST00000368393 TMEM256Q8N2U0 113 aa9.35□□□□□ -0.91
MUC1-208ENST00000368393 CYB561D1Q8N8Q1 229 aa9.35□□□□□ -0.91
MUC1-208ENST00000368393 C11orf72Q8NBR9 251 aa9.35□□□□□ -0.91
MUC1-208ENST00000368393 NKX6-2Q9C056 277 aaPredicted RBP9.35□□□□□ -0.91
MUC1-208ENST00000368393 C11orf21Q9P2W6 132 aa9.35□□□□□ -0.91
MUC1-208ENST00000368393 PSG8Q9UQ74 426 aa9.35□□□□□ -0.91
MUC1-208ENST00000368393 IGHV3OR16-12A0A075B7B8 117 aa9.34□□□□□ -0.91
MUC1-208ENST00000368393 LOC102723971A0A1B0GUV8 181 aa9.34□□□□□ -0.91
MUC1-208ENST00000368393 RNASE4P34096 147 aaKnown RBP9.34□□□□□ -0.91
MUC1-208ENST00000368393 NANOS2P60321 138 aaKnown RBP9.34□□□□□ -0.91
MUC1-208ENST00000368393 CASC10Q5T4H9 136 aa9.34□□□□□ -0.91
MUC1-208ENST00000368393 IQCF2Q8IXL9 164 aa9.34□□□□□ -0.91
MUC1-208ENST00000368393 HIST1H2BAQ96A08 127 aa9.34□□□□□ -0.91
MUC1-208ENST00000368393 DKK2Q9UBU2 259 aa9.34□□□□□ -0.91
MUC1-208ENST00000368393 RPH3ALQ9UNE2 315 aa9.34□□□□□ -0.91
MUC1-208ENST00000368393 C3orf84H3BNL1 204 aa9.33□□□□□ -0.92
MUC1-208ENST00000368393 HBE1P02100 147 aa9.33□□□□□ -0.92
MUC1-208ENST00000368393 CRIP1P50238 77 aa9.33□□□□□ -0.92
MUC1-208ENST00000368393 FLI1Q01543 452 aaPredicted RBP9.33□□□□□ -0.92
MUC1-208ENST00000368393 RRN3P1Q2M238 152 aa9.33□□□□□ -0.92
MUC1-208ENST00000368393 LINC00612Q8N6U2 182 aa9.33□□□□□ -0.92
MUC1-208ENST00000368393 C11orf52Q96A22 123 aa9.33□□□□□ -0.92
MUC1-208ENST00000368393 C8orf49Q96NF6 230 aa9.33□□□□□ -0.92
MUC1-208ENST00000368393 LINC01587Q99440 93 aa9.33□□□□□ -0.92
MUC1-208ENST00000368393 TCEAL7Q9BRU2 100 aa9.33□□□□□ -0.92
MUC1-208ENST00000368393 TP53TG3Q9ULZ0 132 aa9.33□□□□□ -0.92
MUC1-208ENST00000368393 SCO2A0A1W2PP80 73 aa9.32□□□□□ -0.92
MUC1-208ENST00000368393 GPX1P07203 203 aa9.32□□□□□ -0.92
MUC1-208ENST00000368393 TDRG1Q3Y452 100 aa9.32□□□□□ -0.92
MUC1-208ENST00000368393 ANXA2RQ3ZCQ2 193 aa9.32□□□□□ -0.92
MUC1-208ENST00000368393 TEX261Q6UWH6 196 aa9.32□□□□□ -0.92
MUC1-208ENST00000368393 Q86TA4 180 aa9.32□□□□□ -0.92
MUC1-208ENST00000368393 PYGO2Q9BRQ0 406 aa9.32□□□□□ -0.92
MUC1-208ENST00000368393 MLST8Q9BVC4 326 aa9.32□□□□□ -0.92
MUC1-208ENST00000368393 TMEM189A5PLL7 270 aa9.31□□□□□ -0.92
MUC1-208ENST00000368393 F6UZH7 168 aa9.31□□□□□ -0.92
MUC1-208ENST00000368393 TMEM183BQ1AE95 376 aa9.31□□□□□ -0.92
MUC1-208ENST00000368393 FAM222AQ5U5X8 452 aa9.31□□□□□ -0.92
MUC1-208ENST00000368393 CST9LP1Q5W188 147 aa9.31□□□□□ -0.92
MUC1-208ENST00000368393 C11orf45Q8TAV5 145 aa9.31□□□□□ -0.92
MUC1-208ENST00000368393 TMEM263Q8WUH6 116 aaKnown RBP9.31□□□□□ -0.92
MUC1-208ENST00000368393 TREM1Q9NP99 234 aa9.31□□□□□ -0.92
MUC1-208ENST00000368393 GNG13Q9P2W3 67 aa9.31□□□□□ -0.92
MUC1-208ENST00000368393 FBLL1A6NHQ2 334 aaKnown RBP9.3□□□□□ -0.92
MUC1-208ENST00000368393 C11orf94C9JXX5 98 aa9.3□□□□□ -0.92
MUC1-208ENST00000368393 LTAP01374 205 aa9.3□□□□□ -0.92
MUC1-208ENST00000368393 IFNA7P01567 189 aa9.3□□□□□ -0.92
MUC1-208ENST00000368393 PPT1P50897 306 aa9.3□□□□□ -0.92
MUC1-208ENST00000368393 ZFAND6Q6FIF0 208 aa9.3□□□□□ -0.92
MUC1-208ENST00000368393 ZNF493Q6ZR52 646 aa9.3□□□□□ -0.92
MUC1-208ENST00000368393 Q6ZTC4 211 aa9.3□□□□□ -0.92
MUC1-208ENST00000368393 PRNTQ86SH4 94 aa9.3□□□□□ -0.92
MUC1-208ENST00000368393 ZNF680Q8NEM1 530 aa9.3□□□□□ -0.92
MUC1-208ENST00000368393 TMEM208Q9BTX3 173 aa9.3□□□□□ -0.92
MUC1-208ENST00000368393 MANBALQ9NQG1 85 aa9.3□□□□□ -0.92
MUC1-208ENST00000368393 IGHV1OR15-1A0A075B7D0 117 aa9.29□□□□□ -0.92
MUC1-208ENST00000368393 IGLV2-8P01709 118 aa9.29□□□□□ -0.92
MUC1-208ENST00000368393 BCL2P10415 239 aa9.29□□□□□ -0.92
MUC1-208ENST00000368393 ZNF767PQ75MW2 155 aa9.29□□□□□ -0.92
MUC1-208ENST00000368393 C16orf74Q96GX8 76 aa9.29□□□□□ -0.92
MUC1-208ENST00000368393 ZC2HC1AQ96GY0 325 aa9.29□□□□□ -0.92
MUC1-208ENST00000368393 NIPSNAP3BQ9BS92 247 aa9.29□□□□□ -0.92
MUC1-208ENST00000368393 DERL1Q9BUN8 251 aa9.29□□□□□ -0.92
MUC1-208ENST00000368393 TRBV20OR9-2A0A075B6H5 130 aa9.28□□□□□ -0.92
MUC1-208ENST00000368393 SPART-AS1P0CW21 52 aa9.28□□□□□ -0.92
MUC1-208ENST00000368393 EMP1P54849 157 aa9.28□□□□□ -0.92
MUC1-208ENST00000368393 BLOC1S1P78537 153 aa9.28□□□□□ -0.92
MUC1-208ENST00000368393 IFITM2Q01629 132 aa9.28□□□□□ -0.92
MUC1-208ENST00000368393 DAZ2Q13117 558 aaKnown RBP9.28□□□□□ -0.92
MUC1-208ENST00000368393 CEMP1Q6PRD7 247 aaPredicted RBP9.28□□□□□ -0.92
MUC1-208ENST00000368393 EIF4E3Q8N5X7 224 aaKnown RBP9.28□□□□□ -0.92
MUC1-208ENST00000368393 PHLDA1Q8WV24 401 aaPredicted RBP9.28□□□□□ -0.92
MUC1-208ENST00000368393 FMC1Q96HJ9 113 aa9.28□□□□□ -0.92
MUC1-208ENST00000368393 TXNDC17Q9BRA2 123 aa9.28□□□□□ -0.92
MUC1-208ENST00000368393 MDFICQ9P1T7 246 aa9.28□□□□□ -0.92
MUC1-208ENST00000368393 DNAH2Q9P225 4427 aa9.27□□□□□ -0.93
MUC1-208ENST00000368393 IGKV3D-20A0A0C4DH25 116 aa9.27□□□□□ -0.93
MUC1-208ENST00000368393 CXorf65A6NEN9 183 aa9.27□□□□□ -0.93
MUC1-208ENST00000368393 LYRM9A8MSI8 78 aa9.27□□□□□ -0.93
MUC1-208ENST00000368393 GNRH2O43555 120 aa9.27□□□□□ -0.93
MUC1-208ENST00000368393 SPINK4O60575 86 aa9.27□□□□□ -0.93
MUC1-208ENST00000368393 GCGP01275 180 aa9.27□□□□□ -0.93
MUC1-208ENST00000368393 HTN1P15515 57 aa9.27□□□□□ -0.93
MUC1-208ENST00000368393 TCL1AP56279 114 aa9.27□□□□□ -0.93
MUC1-208ENST00000368393 MEF2BQ02080 365 aaPredicted RBP9.27□□□□□ -0.93
MUC1-208ENST00000368393 MUC21Q5SSG8 566 aa9.27□□□□□ -0.93
MUC1-208ENST00000368393 SAPCD1Q5SSQ6 148 aa9.27□□□□□ -0.93
MUC1-208ENST00000368393 IBA57Q5T440 356 aaKnown RBP9.27□□□□□ -0.93
MUC1-208ENST00000368393 PCNPQ8WW12 178 aaKnown RBP9.27□□□□□ -0.93
MUC1-208ENST00000368393 GSN-AS1Q9NRJ2 163 aa9.27□□□□□ -0.93
MUC1-208ENST00000368393 ZFP30Q9Y2G7 519 aa9.27□□□□□ -0.93
MUC1-208ENST00000368393 DNAH10Q8IVF4 4471 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms