RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 SERF1AO75920 110 aa8.43□□□□□ -1.06
PTPRK-205ENST00000368213 TMEM14CQ9P0S9 112 aa8.43□□□□□ -1.06
PTPRK-205ENST00000368213 SMKR1H3BMG3 65 aa8.43□□□□□ -1.06
PTPRK-205ENST00000368213 DEFB135Q30KP9 77 aa8.43□□□□□ -1.06
PTPRK-205ENST00000368213 ZNF491Q8N8L2 437 aa8.43□□□□□ -1.06
PTPRK-205ENST00000368213 NKAPP1Q8N9T2 125 aa8.43□□□□□ -1.06
PTPRK-205ENST00000368213 CHCHD1Q96BP2 118 aaKnown RBP8.43□□□□□ -1.06
PTPRK-205ENST00000368213 PLEKHB2Q96CS7 222 aa8.43□□□□□ -1.06
PTPRK-205ENST00000368213 FGF23Q9GZV9 251 aaPredicted RBP8.43□□□□□ -1.06
PTPRK-205ENST00000368213 GGTLC3B5MD39 225 aa8.42□□□□□ -1.06
PTPRK-205ENST00000368213 NUP35Q8NFH5 326 aa8.42□□□□□ -1.06
PTPRK-205ENST00000368213 OR2K2Q8NGT1 345 aa8.42□□□□□ -1.06
PTPRK-205ENST00000368213 PYGO2Q9BRQ0 406 aa8.42□□□□□ -1.06
PTPRK-205ENST00000368213 U3KQE9 123 aa8.42□□□□□ -1.06
PTPRK-205ENST00000368213 INS-IGF2F8WCM5 200 aa8.42□□□□□ -1.06
PTPRK-205ENST00000368213 COL5A1-AS1Q5SY13 56 aa8.42□□□□□ -1.06
PTPRK-205ENST00000368213 LY6G5BQ8NDX9 201 aa8.42□□□□□ -1.06
PTPRK-205ENST00000368213 A6NDX4 124 aa8.42□□□□□ -1.06
PTPRK-205ENST00000368213 I3L3M4 83 aa8.42□□□□□ -1.06
PTPRK-205ENST00000368213 TSPAN13O95857 204 aa8.42□□□□□ -1.06
PTPRK-205ENST00000368213 AMN1Q8IY45 258 aa8.42□□□□□ -1.06
PTPRK-205ENST00000368213 ICOSQ9Y6W8 199 aa8.42□□□□□ -1.06
PTPRK-205ENST00000368213 TMEM131Q92545 1883 aa8.42□□□□□ -1.06
PTPRK-205ENST00000368213 TMEM89A2RUT3 159 aa8.42□□□□□ -1.06
PTPRK-205ENST00000368213 C2orf70A6NJV1 201 aa8.42□□□□□ -1.06
PTPRK-205ENST00000368213 C16orf74Q96GX8 76 aa8.42□□□□□ -1.06
PTPRK-205ENST00000368213 NCOR2Q9Y618 2525 aa8.42□□□□□ -1.06
PTPRK-205ENST00000368213 LINC01551Q86U37 167 aa8.42□□□□□ -1.06
PTPRK-205ENST00000368213 MRPL53Q96EL3 112 aaKnown RBP8.42□□□□□ -1.06
PTPRK-205ENST00000368213 IGHG2P01859 326 aa8.41□□□□□ -1.06
PTPRK-205ENST00000368213 RITA1Q96K30 269 aa8.41□□□□□ -1.06
PTPRK-205ENST00000368213 CYTL1Q9NRR1 136 aa8.41□□□□□ -1.06
PTPRK-205ENST00000368213 CLPSL2Q6UWE3 100 aa8.41□□□□□ -1.06
PTPRK-205ENST00000368213 PRIMA1Q86XR5 153 aa8.41□□□□□ -1.06
PTPRK-205ENST00000368213 PRR25Q96S07 402 aa8.41□□□□□ -1.06
PTPRK-205ENST00000368213 TMEM242Q9NWH2 141 aa8.41□□□□□ -1.06
PTPRK-205ENST00000368213 LY96Q9Y6Y9 160 aa8.41□□□□□ -1.06
PTPRK-205ENST00000368213 SPG11Q96JI7 2443 aa8.41□□□□□ -1.06
PTPRK-205ENST00000368213 TRAV25A0A0B4J276 109 aa8.41□□□□□ -1.06
PTPRK-205ENST00000368213 MSMPQ1L6U9 139 aa8.41□□□□□ -1.06
PTPRK-205ENST00000368213 Q6YL49 198 aa8.41□□□□□ -1.06
PTPRK-205ENST00000368213 ANAPC10Q9UM13 185 aa8.41□□□□□ -1.06
PTPRK-205ENST00000368213 A0A1B0GW64 132 aa8.41□□□□□ -1.06
PTPRK-205ENST00000368213 SRSF3P84103 164 aaKnown RBP8.41□□□□□ -1.06
PTPRK-205ENST00000368213 PAX2Q02962 417 aa8.4□□□□□ -1.06
PTPRK-205ENST00000368213 MRPL23Q16540 153 aaKnown RBP8.4□□□□□ -1.06
PTPRK-205ENST00000368213 LINC01559Q495D7 138 aa8.4□□□□□ -1.06
PTPRK-205ENST00000368213 SRSF2Q01130 221 aaKnown RBP8.4□□□□□ -1.06
PTPRK-205ENST00000368213 GATD1Q8NB37 220 aa8.4□□□□□ -1.06
PTPRK-205ENST00000368213 C14orf144Q96I85 54 aa8.4□□□□□ -1.06
PTPRK-205ENST00000368213 IGLL5B9A064 214 aa8.39□□□□□ -1.07
PTPRK-205ENST00000368213 TMEM238C9JI98 176 aa8.39□□□□□ -1.07
PTPRK-205ENST00000368213 CRLF1O75462 422 aa8.39□□□□□ -1.07
PTPRK-205ENST00000368213 TMEM170AQ8WVE7 144 aa8.39□□□□□ -1.07
PTPRK-205ENST00000368213 C1orf43Q9BWL3 253 aa8.39□□□□□ -1.07
PTPRK-205ENST00000368213 Q6ZQT7 251 aa8.39□□□□□ -1.07
PTPRK-205ENST00000368213 MED13Q9UHV7 2174 aa8.39□□□□□ -1.07
PTPRK-205ENST00000368213 IGHV1-24A0A0C4DH33 117 aa8.39□□□□□ -1.07
PTPRK-205ENST00000368213 MYMXA0A1B0GTQ4 84 aa8.39□□□□□ -1.07
PTPRK-205ENST00000368213 H3BMM0 161 aa8.39□□□□□ -1.07
PTPRK-205ENST00000368213 UBE2WQ96B02 151 aa8.39□□□□□ -1.07
PTPRK-205ENST00000368213 TIMM21Q9BVV7 248 aa8.39□□□□□ -1.07
PTPRK-205ENST00000368213 IGLV11-55A0A075B6I3 123 aa8.39□□□□□ -1.07
PTPRK-205ENST00000368213 ZNF493Q6ZR52 646 aa8.39□□□□□ -1.07
PTPRK-205ENST00000368213 CFHR4Q92496 578 aa8.39□□□□□ -1.07
PTPRK-205ENST00000368213 ESM1Q9NQ30 184 aa8.39□□□□□ -1.07
PTPRK-205ENST00000368213 DEFB4AO15263 64 aa8.39□□□□□ -1.07
PTPRK-205ENST00000368213 GUSBP1Q15486 140 aa8.39□□□□□ -1.07
PTPRK-205ENST00000368213 TMEM213A2RRL7 107 aa8.38□□□□□ -1.07
PTPRK-205ENST00000368213 HLA-DMBP28068 263 aa8.38□□□□□ -1.07
PTPRK-205ENST00000368213 PKIGQ9Y2B9 76 aa8.38□□□□□ -1.07
PTPRK-205ENST00000368213 TNFRSF6BO95407 300 aa8.38□□□□□ -1.07
PTPRK-205ENST00000368213 GFRA4Q9GZZ7 299 aa8.38□□□□□ -1.07
PTPRK-205ENST00000368213 SDHAF1A6NFY7 115 aa8.38□□□□□ -1.07
PTPRK-205ENST00000368213 IFITM2Q01629 132 aa8.38□□□□□ -1.07
PTPRK-205ENST00000368213 ZNF492Q9P255 531 aa8.38□□□□□ -1.07
PTPRK-205ENST00000368213 FNDC4Q9H6D8 234 aaPredicted RBP8.38□□□□□ -1.07
PTPRK-205ENST00000368213 TP53TG1Q9Y2A0 90 aa8.38□□□□□ -1.07
PTPRK-205ENST00000368213 LAMTOR2Q9Y2Q5 125 aa8.38□□□□□ -1.07
PTPRK-205ENST00000368213 A8MXK9 166 aa8.37□□□□□ -1.07
PTPRK-205ENST00000368213 VWC2LB2RUY7 222 aa8.37□□□□□ -1.07
PTPRK-205ENST00000368213 IGLV1-47P01700 117 aa8.37□□□□□ -1.07
PTPRK-205ENST00000368213 GYPEP15421 78 aa8.37□□□□□ -1.07
PTPRK-205ENST00000368213 UBE2BP63146 152 aa8.37□□□□□ -1.07
PTPRK-205ENST00000368213 RNF152Q8N8N0 203 aa8.37□□□□□ -1.07
PTPRK-205ENST00000368213 PRSS46E5RG02 174 aa8.37□□□□□ -1.07
PTPRK-205ENST00000368213 SH2D6Q7Z4S9 175 aa8.37□□□□□ -1.07
PTPRK-205ENST00000368213 LEPROTO15243 131 aa8.37□□□□□ -1.07
PTPRK-205ENST00000368213 HLA-DRB4P13762 266 aa8.37□□□□□ -1.07
PTPRK-205ENST00000368213 HLA-DRB4X5D2U9 266 aa8.37□□□□□ -1.07
PTPRK-205ENST00000368213 GPHB5Q86YW7 130 aa8.37□□□□□ -1.07
PTPRK-205ENST00000368213 PRSS29PA6NIE9 313 aa8.36□□□□□ -1.07
PTPRK-205ENST00000368213 DYNAPQ8N1N2 210 aa8.36□□□□□ -1.07
PTPRK-205ENST00000368213 C17orf77Q96MU5 243 aa8.36□□□□□ -1.07
PTPRK-205ENST00000368213 PLXNB3Q9ULL4 1909 aa8.36□□□□□ -1.07
PTPRK-205ENST00000368213 I3L2K1 104 aa8.36□□□□□ -1.07
PTPRK-205ENST00000368213 K7EIM0 57 aa8.36□□□□□ -1.07
PTPRK-205ENST00000368213 IGHV3-30P01768 117 aa8.36□□□□□ -1.07
PTPRK-205ENST00000368213 IGHV3-33P01772 117 aa8.36□□□□□ -1.07
PTPRK-205ENST00000368213 IGHV3-30-3P0DP02 117 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms