RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 SPATA31B1PQ5VZV4 182 aa5.72□□□□□ -1.49
SPTA1-201ENST00000368147 FAM223AQ8IWN6 122 aa5.72□□□□□ -1.49
SPTA1-201ENST00000368147 H0YJW9 148 aa5.72□□□□□ -1.49
SPTA1-201ENST00000368147 Q5BKY6 102 aa5.72□□□□□ -1.49
SPTA1-201ENST00000368147 TMEM141Q96I45 108 aa5.72□□□□□ -1.49
SPTA1-201ENST00000368147 RCC1LQ96I51 464 aaKnown RBP5.72□□□□□ -1.49
SPTA1-201ENST00000368147 PRO1854Q9UHT4 67 aa5.72□□□□□ -1.49
SPTA1-201ENST00000368147 FOXL1Q12952 345 aa5.72□□□□□ -1.49
SPTA1-201ENST00000368147 TMEM256Q8N2U0 113 aa5.72□□□□□ -1.49
SPTA1-201ENST00000368147 NDUFC1O43677 76 aa5.72□□□□□ -1.49
SPTA1-201ENST00000368147 MRPL27Q9P0M9 148 aaKnown RBP5.72□□□□□ -1.49
SPTA1-201ENST00000368147 SMKR1H3BMG3 65 aa5.72□□□□□ -1.49
SPTA1-201ENST00000368147 K7EP13 123 aa5.72□□□□□ -1.49
SPTA1-201ENST00000368147 ANKRD39Q53RE8 183 aa5.72□□□□□ -1.49
SPTA1-201ENST00000368147 C14orf178Q8N769 122 aaPredicted RBP5.72□□□□□ -1.49
SPTA1-201ENST00000368147 ESM1Q9NQ30 184 aa5.72□□□□□ -1.49
SPTA1-201ENST00000368147 H3BMG7 143 aa5.71□□□□□ -1.49
SPTA1-201ENST00000368147 CRYGSP22914 178 aa5.71□□□□□ -1.49
SPTA1-201ENST00000368147 DMRTC2Q8IXT2 367 aaPredicted RBP5.71□□□□□ -1.49
SPTA1-201ENST00000368147 ZFP36P26651 326 aaKnown RBP5.71□□□□□ -1.49
SPTA1-201ENST00000368147 HIST1H2BLQ99880 126 aa5.71□□□□□ -1.49
SPTA1-201ENST00000368147 ZNF581Q9P0T4 197 aa5.71□□□□□ -1.49
SPTA1-201ENST00000368147 IGKV2D-24A0A075B6R9 120 aa5.71□□□□□ -1.5
SPTA1-201ENST00000368147 MLANAQ16655 118 aa5.71□□□□□ -1.5
SPTA1-201ENST00000368147 HIGD2BQ4VC39 106 aa5.71□□□□□ -1.5
SPTA1-201ENST00000368147 SERP1Q9Y6X1 66 aa5.71□□□□□ -1.5
SPTA1-201ENST00000368147 Q6ZQT7 251 aa5.71□□□□□ -1.5
SPTA1-201ENST00000368147 TRPT1Q86TN4 253 aaKnown RBP5.71□□□□□ -1.5
SPTA1-201ENST00000368147 C18orf12Q96KH6 178 aa5.71□□□□□ -1.5
SPTA1-201ENST00000368147 IGKV1-27A0A075B6S5 117 aa5.71□□□□□ -1.5
SPTA1-201ENST00000368147 A0A0B4J2C4 111 aa5.71□□□□□ -1.5
SPTA1-201ENST00000368147 IGHV2-70DA0A0C4DH43 119 aa5.71□□□□□ -1.5
SPTA1-201ENST00000368147 DEFB105AQ8NG35 78 aa5.71□□□□□ -1.5
SPTA1-201ENST00000368147 USMG5Q96IX5 58 aa5.71□□□□□ -1.5
SPTA1-201ENST00000368147 SYS1-DBNDD2H3BUS1 97 aa5.7□□□□□ -1.5
SPTA1-201ENST00000368147 HIST1H2BKO60814 126 aa5.7□□□□□ -1.5
SPTA1-201ENST00000368147 HIST1H2BJP06899 126 aa5.7□□□□□ -1.5
SPTA1-201ENST00000368147 HIST1H2BOP23527 126 aa5.7□□□□□ -1.5
SPTA1-201ENST00000368147 HIST1H2BBP33778 126 aa5.7□□□□□ -1.5
SPTA1-201ENST00000368147 HIST1H2BDP58876 126 aa5.7□□□□□ -1.5
SPTA1-201ENST00000368147 HIST1H2BCP62807 126 aa5.7□□□□□ -1.5
SPTA1-201ENST00000368147 RPL23P62829 140 aaKnown RBP5.7□□□□□ -1.5
SPTA1-201ENST00000368147 SRSF2Q01130 221 aaKnown RBP5.7□□□□□ -1.5
SPTA1-201ENST00000368147 HIST2H2BEQ16778 126 aa5.7□□□□□ -1.5
SPTA1-201ENST00000368147 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.7□□□□□ -1.5
SPTA1-201ENST00000368147 HIST1H2BHQ93079 126 aa5.7□□□□□ -1.5
SPTA1-201ENST00000368147 HIST1H2BNQ99877 126 aa5.7□□□□□ -1.5
SPTA1-201ENST00000368147 HIST1H2BMQ99879 126 aa5.7□□□□□ -1.5
SPTA1-201ENST00000368147 IGHV4-59P01825 116 aa5.7□□□□□ -1.5
SPTA1-201ENST00000368147 C15orf53Q8NAA6 179 aa5.7□□□□□ -1.5
SPTA1-201ENST00000368147 CSTL1Q9H114 145 aa5.7□□□□□ -1.5
SPTA1-201ENST00000368147 PLXNB3Q9ULL4 1909 aa5.7□□□□□ -1.5
SPTA1-201ENST00000368147 IGKV1D-17A0A075B6S4 117 aa5.7□□□□□ -1.5
SPTA1-201ENST00000368147 IGKV1-9A0A0C4DH69 117 aa5.7□□□□□ -1.5
SPTA1-201ENST00000368147 LINC01620Q4KN68 170 aa5.7□□□□□ -1.5
SPTA1-201ENST00000368147 TRBV6-7A0A0A0MS04 114 aa5.7□□□□□ -1.5
SPTA1-201ENST00000368147 CCL24O00175 119 aa5.7□□□□□ -1.5
SPTA1-201ENST00000368147 SH2D1AO60880 128 aa5.7□□□□□ -1.5
SPTA1-201ENST00000368147 MST1LQ2TV78 715 aa5.7□□□□□ -1.5
SPTA1-201ENST00000368147 C8orf86Q6ZUL3 223 aa5.7□□□□□ -1.5
SPTA1-201ENST00000368147 A0A1B0GTI1 187 aa5.7□□□□□ -1.5
SPTA1-201ENST00000368147 DEFB125Q8N687 156 aa5.7□□□□□ -1.5
SPTA1-201ENST00000368147 C8orf49Q96NF6 230 aa5.7□□□□□ -1.5
SPTA1-201ENST00000368147 EFNB3Q15768 340 aa5.7□□□□□ -1.5
SPTA1-201ENST00000368147 DEFB112Q30KQ8 113 aa5.7□□□□□ -1.5
SPTA1-201ENST00000368147 DEFB4AO15263 64 aa5.69□□□□□ -1.5
SPTA1-201ENST00000368147 RPL18AQ02543 176 aaKnown RBP5.69□□□□□ -1.5
SPTA1-201ENST00000368147 C10orf105Q8TEF2 133 aa5.69□□□□□ -1.5
SPTA1-201ENST00000368147 SIGLEC9Q9Y336 463 aa5.69□□□□□ -1.5
SPTA1-201ENST00000368147 IGKV1-39P01597 117 aa5.69□□□□□ -1.5
SPTA1-201ENST00000368147 IGKV1D-39P04432 117 aa5.69□□□□□ -1.5
SPTA1-201ENST00000368147 CARD19Q96LW7 228 aa5.69□□□□□ -1.5
SPTA1-201ENST00000368147 CSRP3P50461 194 aa5.69□□□□□ -1.5
SPTA1-201ENST00000368147 MORN5Q5VZ52 161 aa5.69□□□□□ -1.5
SPTA1-201ENST00000368147 APRG1Q8IVJ8 170 aa5.69□□□□□ -1.5
SPTA1-201ENST00000368147 C3orf22Q8N5N4 141 aa5.69□□□□□ -1.5
SPTA1-201ENST00000368147 CSPG4Q6UVK1 2322 aa5.69□□□□□ -1.5
SPTA1-201ENST00000368147 LOC105371267A0A1B0GV96 52 aa5.69□□□□□ -1.5
SPTA1-201ENST00000368147 PDE6GP18545 87 aa5.69□□□□□ -1.5
SPTA1-201ENST00000368147 ZFP2Q6ZN57 461 aa5.69□□□□□ -1.5
SPTA1-201ENST00000368147 TBX6O95947 436 aaPredicted RBP5.69□□□□□ -1.5
SPTA1-201ENST00000368147 PFN2P35080 140 aa5.69□□□□□ -1.5
SPTA1-201ENST00000368147 NREPQ16612 68 aa5.69□□□□□ -1.5
SPTA1-201ENST00000368147 HEPN1Q6WQI6 88 aa5.69□□□□□ -1.5
SPTA1-201ENST00000368147 A0A1W2PPM0 123 aa5.69□□□□□ -1.5
SPTA1-201ENST00000368147 A6NED7 52 aa5.69□□□□□ -1.5
SPTA1-201ENST00000368147 USP17L23D6RBM5 183 aa5.69□□□□□ -1.5
SPTA1-201ENST00000368147 F8W735 103 aaPredicted RBP5.69□□□□□ -1.5
SPTA1-201ENST00000368147 FBLN5Q9UBX5 448 aa5.69□□□□□ -1.5
SPTA1-201ENST00000368147 SRCAPQ6ZRS2 3230 aa5.69□□□□□ -1.5
SPTA1-201ENST00000368147 IGKV1D-8A0A087WSZ0 117 aa5.69□□□□□ -1.5
SPTA1-201ENST00000368147 IGKV1-16P04430 117 aa5.69□□□□□ -1.5
SPTA1-201ENST00000368147 RNASE2P10153 161 aaKnown RBP5.69□□□□□ -1.5
SPTA1-201ENST00000368147 VWC2Q2TAL6 325 aa5.69□□□□□ -1.5
SPTA1-201ENST00000368147 VSIG2Q96IQ7 327 aa5.69□□□□□ -1.5
SPTA1-201ENST00000368147 NOP10Q9NPE3 64 aaKnown RBP5.69□□□□□ -1.5
SPTA1-201ENST00000368147 DAZ1Q9NQZ3 744 aaKnown RBP5.69□□□□□ -1.5
SPTA1-201ENST00000368147 TRBV25-1A0A075B6N4 114 aa5.68□□□□□ -1.5
SPTA1-201ENST00000368147 IGKV4-1P06312 121 aa5.68□□□□□ -1.5
SPTA1-201ENST00000368147 SLURP1P55000 103 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 462.9 ms