RNA–Protein interactions for RNA: ENST00000367718.5

TNFSF4-202, Transcript of TNF superfamily member 4, humanhuman

TSL 1 (best) BASIC

Gene TNFSF4, Length 3,429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-202ENST00000367718 FNDC10F2Z333 226 aa4.34□□□□□ -1.71
TNFSF4-202ENST00000367718 RPLP1P05386 114 aaKnown RBP4.34□□□□□ -1.71
TNFSF4-202ENST00000367718 TNP2Q05952 138 aa4.34□□□□□ -1.71
TNFSF4-202ENST00000367718 Q0VG73 95 aa4.34□□□□□ -1.71
TNFSF4-202ENST00000367718 VAMP3Q15836 100 aa4.34□□□□□ -1.71
TNFSF4-202ENST00000367718 TMEM249Q2WGJ8 235 aa4.34□□□□□ -1.71
TNFSF4-202ENST00000367718 FAM74A4Q5TZK3 123 aa4.34□□□□□ -1.71
TNFSF4-202ENST00000367718 TEX43Q6ZNM6 134 aa4.34□□□□□ -1.71
TNFSF4-202ENST00000367718 TMEM70Q9BUB7 260 aa4.34□□□□□ -1.71
TNFSF4-202ENST00000367718 AP5S1Q9NUS5 200 aa4.34□□□□□ -1.71
TNFSF4-202ENST00000367718 BEX4Q9NWD9 120 aaPredicted RBP4.34□□□□□ -1.71
TNFSF4-202ENST00000367718 LAMTOR2Q9Y2Q5 125 aa4.34□□□□□ -1.71
TNFSF4-202ENST00000367718 KIR2DL5BA0A0G2JN68 375 aa4.34□□□□□ -1.71
TNFSF4-202ENST00000367718 KIR2DL5BA0A0G2JPC4 375 aa4.34□□□□□ -1.71
TNFSF4-202ENST00000367718 A0A1W2PRX2 142 aa4.34□□□□□ -1.71
TNFSF4-202ENST00000367718 C7orf71A4D174 169 aa4.34□□□□□ -1.71
TNFSF4-202ENST00000367718 C19orf71A6NCJ1 209 aa4.34□□□□□ -1.71
TNFSF4-202ENST00000367718 C2orf70A6NJV1 201 aa4.34□□□□□ -1.71
TNFSF4-202ENST00000367718 TGFAP01135 160 aa4.34□□□□□ -1.71
TNFSF4-202ENST00000367718 IGHV4-59P01825 116 aa4.34□□□□□ -1.71
TNFSF4-202ENST00000367718 MT-ND6P03923 174 aa4.34□□□□□ -1.71
TNFSF4-202ENST00000367718 FCER1GP30273 86 aa4.34□□□□□ -1.71
TNFSF4-202ENST00000367718 RNASE4P34096 147 aaKnown RBP4.34□□□□□ -1.71
TNFSF4-202ENST00000367718 EFNA4P52798 201 aa4.34□□□□□ -1.71
TNFSF4-202ENST00000367718 PRR9Q5T870 116 aa4.34□□□□□ -1.71
TNFSF4-202ENST00000367718 KIR2DL5AQ8N109 375 aa4.34□□□□□ -1.71
TNFSF4-202ENST00000367718 OR4B1Q8NGF8 309 aa4.34□□□□□ -1.71
TNFSF4-202ENST00000367718 NEU4Q8WWR8 484 aaPredicted RBP4.34□□□□□ -1.71
TNFSF4-202ENST00000367718 DKK2Q9UBU2 259 aa4.34□□□□□ -1.71
TNFSF4-202ENST00000367718 VWFP04275 2813 aa4.34□□□□□ -1.71
TNFSF4-202ENST00000367718 IGHV2-70DA0A0C4DH43 119 aa4.34□□□□□ -1.72
TNFSF4-202ENST00000367718 IGHG4P01861 327 aa4.34□□□□□ -1.72
TNFSF4-202ENST00000367718 PRSS1P07477 247 aa4.34□□□□□ -1.72
TNFSF4-202ENST00000367718 C8orf86Q6ZUL3 223 aa4.34□□□□□ -1.72
TNFSF4-202ENST00000367718 OR11H6Q8NGC7 330 aa4.34□□□□□ -1.72
TNFSF4-202ENST00000367718 PRR25Q96S07 402 aa4.34□□□□□ -1.72
TNFSF4-202ENST00000367718 AGPAT4-IT1Q9H0P7 198 aa4.34□□□□□ -1.72
TNFSF4-202ENST00000367718 SYS1-DBNDD2H3BUS1 97 aa4.33□□□□□ -1.72
TNFSF4-202ENST00000367718 GNRH2O43555 120 aa4.33□□□□□ -1.72
TNFSF4-202ENST00000367718 ZNF688P0C7X2 276 aa4.33□□□□□ -1.72
TNFSF4-202ENST00000367718 S100A4P26447 101 aaKnown RBP4.33□□□□□ -1.72
TNFSF4-202ENST00000367718 TSPOP30536 169 aa4.33□□□□□ -1.72
TNFSF4-202ENST00000367718 MRPL51Q4U2R6 128 aaKnown RBP4.33□□□□□ -1.72
TNFSF4-202ENST00000367718 FER1L6-AS1Q8NA97 138 aa4.33□□□□□ -1.72
TNFSF4-202ENST00000367718 LY6G5BQ8NDX9 201 aa4.33□□□□□ -1.72
TNFSF4-202ENST00000367718 C20orf173Q96LM9 149 aa4.33□□□□□ -1.72
TNFSF4-202ENST00000367718 SIRPDQ9H106 197 aa4.33□□□□□ -1.72
TNFSF4-202ENST00000367718 SIGLEC8Q9NYZ4 499 aa4.33□□□□□ -1.72
TNFSF4-202ENST00000367718 A0A087WWL8 130 aa4.33□□□□□ -1.72
TNFSF4-202ENST00000367718 A0A1B0GXF2 115 aa4.33□□□□□ -1.72
TNFSF4-202ENST00000367718 CIDEAO60543 219 aa4.33□□□□□ -1.72
TNFSF4-202ENST00000367718 ARL3P36405 182 aa4.33□□□□□ -1.72
TNFSF4-202ENST00000367718 SPANXN1Q5VSR9 72 aa4.33□□□□□ -1.72
TNFSF4-202ENST00000367718 C18orf65Q6ZTR6 163 aa4.33□□□□□ -1.72
TNFSF4-202ENST00000367718 PCP2Q8IVA1 136 aa4.33□□□□□ -1.72
TNFSF4-202ENST00000367718 C14orf178Q8N769 122 aaPredicted RBP4.33□□□□□ -1.72
TNFSF4-202ENST00000367718 BBC3Q96PG8 261 aaPredicted RBP4.33□□□□□ -1.72
TNFSF4-202ENST00000367718 THYN1Q9P016 225 aa4.33□□□□□ -1.72
TNFSF4-202ENST00000367718 TRAV41A0A0B4J266 112 aa4.33□□□□□ -1.72
TNFSF4-202ENST00000367718 ODF3BA8MYP8 253 aa4.33□□□□□ -1.72
TNFSF4-202ENST00000367718 SMCPP49901 116 aaPredicted RBP4.33□□□□□ -1.72
TNFSF4-202ENST00000367718 OR10J3Q5JRS4 329 aa4.33□□□□□ -1.72
TNFSF4-202ENST00000367718 FAM162BQ5T6X4 162 aa4.33□□□□□ -1.72
TNFSF4-202ENST00000367718 OR2K2Q8NGT1 345 aa4.33□□□□□ -1.72
TNFSF4-202ENST00000367718 PDZD2O15018 2839 aa4.32□□□□□ -1.72
TNFSF4-202ENST00000367718 RPL7P18124 248 aaKnown RBP4.32□□□□□ -1.72
TNFSF4-202ENST00000367718 PTTG1IPP53801 180 aa4.32□□□□□ -1.72
TNFSF4-202ENST00000367718 ATP5G2Q06055 141 aa4.32□□□□□ -1.72
TNFSF4-202ENST00000367718 RIGQ13278 110 aa4.32□□□□□ -1.72
TNFSF4-202ENST00000367718 CCDC144NLQ6NUI1 221 aa4.32□□□□□ -1.72
TNFSF4-202ENST00000367718 C2orf88Q9BSF0 95 aa4.32□□□□□ -1.72
TNFSF4-202ENST00000367718 MAP1LC3CQ9BXW4 147 aa4.32□□□□□ -1.72
TNFSF4-202ENST00000367718 PRSS22Q9GZN4 317 aa4.32□□□□□ -1.72
TNFSF4-202ENST00000367718 TMEM160Q9NX00 188 aa4.32□□□□□ -1.72
TNFSF4-202ENST00000367718 UQCR10Q9UDW1 63 aa4.32□□□□□ -1.72
TNFSF4-202ENST00000367718 GOLT1BQ9Y3E0 138 aa4.32□□□□□ -1.72
TNFSF4-202ENST00000367718 LY96Q9Y6Y9 160 aa4.32□□□□□ -1.72
TNFSF4-202ENST00000367718 TRAV8-6A0A0B4J262 113 aa4.32□□□□□ -1.72
TNFSF4-202ENST00000367718 HSBP1L1C9JCN9 74 aa4.32□□□□□ -1.72
TNFSF4-202ENST00000367718 F5H697 171 aa4.32□□□□□ -1.72
TNFSF4-202ENST00000367718 LEPP41159 167 aa4.32□□□□□ -1.72
TNFSF4-202ENST00000367718 SRSF1Q07955 248 aaKnown RBP eCLIP4.32□□□□□ -1.72
TNFSF4-202ENST00000367718 TMEM30BQ3MIR4 351 aa4.32□□□□□ -1.72
TNFSF4-202ENST00000367718 PVRIGQ6DKI7 326 aa4.32□□□□□ -1.72
TNFSF4-202ENST00000367718 GTSCR1Q86UQ5 136 aa4.32□□□□□ -1.72
TNFSF4-202ENST00000367718 RPL39LQ96EH5 51 aaKnown RBP4.32□□□□□ -1.72
TNFSF4-202ENST00000367718 AJUBAQ96IF1 538 aa4.32□□□□□ -1.72
TNFSF4-202ENST00000367718 KLK9Q9UKQ9 250 aa4.32□□□□□ -1.72
TNFSF4-202ENST00000367718 KLF12Q9Y4X4 402 aa4.32□□□□□ -1.72
TNFSF4-202ENST00000367718 IGHV3OR16-12A0A075B7B8 117 aa4.31□□□□□ -1.72
TNFSF4-202ENST00000367718 TRAV9-2A0A087WT02 112 aa4.31□□□□□ -1.72
TNFSF4-202ENST00000367718 TRBV9A0A0B4J1U6 114 aa4.31□□□□□ -1.72
TNFSF4-202ENST00000367718 TRAV12-3A0A0B4J271 114 aa4.31□□□□□ -1.72
TNFSF4-202ENST00000367718 NDUFA3O95167 84 aa4.31□□□□□ -1.72
TNFSF4-202ENST00000367718 TMEM78Q5T7P6 136 aa4.31□□□□□ -1.72
TNFSF4-202ENST00000367718 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.31□□□□□ -1.72
TNFSF4-202ENST00000367718 METTL26Q96S19 204 aa4.31□□□□□ -1.72
TNFSF4-202ENST00000367718 UNC79Q9P2D8 2635 aa4.31□□□□□ -1.72
TNFSF4-202ENST00000367718 IGHV3-64A0A075B6Q5 118 aa4.31□□□□□ -1.72
TNFSF4-202ENST00000367718 IGKV3D-20A0A0C4DH25 116 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 487.4 ms