RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 C10orf55Q5SWW7 151 aa4.29□□□□□ -1.72
CDC42BPA-204ENST00000366767 SPACA3Q8IXA5 215 aa4.29□□□□□ -1.72
CDC42BPA-204ENST00000366767 S4R3C0 116 aa4.29□□□□□ -1.72
CDC42BPA-204ENST00000366767 V9GYY9 64 aa4.29□□□□□ -1.72
CDC42BPA-204ENST00000366767 PRSS29PA6NIE9 313 aa4.29□□□□□ -1.72
CDC42BPA-204ENST00000366767 KNCNA6PVL3 124 aa4.29□□□□□ -1.72
CDC42BPA-204ENST00000366767 K7EM74 188 aa4.29□□□□□ -1.72
CDC42BPA-204ENST00000366767 NDUFB8O95169 186 aa4.29□□□□□ -1.72
CDC42BPA-204ENST00000366767 IGLC1P0CG04 106 aa4.29□□□□□ -1.72
CDC42BPA-204ENST00000366767 LOXP28300 417 aaPredicted RBP4.29□□□□□ -1.72
CDC42BPA-204ENST00000366767 A0A1W2PNU3 283 aaPredicted RBP4.29□□□□□ -1.72
CDC42BPA-204ENST00000366767 KLF5Q13887 457 aaPredicted RBP4.29□□□□□ -1.72
CDC42BPA-204ENST00000366767 DUX4L9Q6RFH8 374 aaPredicted RBP4.29□□□□□ -1.72
CDC42BPA-204ENST00000366767 SHANK2-AS3Q9BTD1 123 aa4.29□□□□□ -1.72
CDC42BPA-204ENST00000366767 C5orf64Q2M2E5 130 aa4.29□□□□□ -1.72
CDC42BPA-204ENST00000366767 MORN5Q5VZ52 161 aa4.29□□□□□ -1.72
CDC42BPA-204ENST00000366767 BRK1Q8WUW1 75 aa4.29□□□□□ -1.72
CDC42BPA-204ENST00000366767 RASL10AQ92737 203 aa4.29□□□□□ -1.72
CDC42BPA-204ENST00000366767 SPXQ9BT56 116 aa4.29□□□□□ -1.72
CDC42BPA-204ENST00000366767 ACYP1P07311 99 aa4.29□□□□□ -1.72
CDC42BPA-204ENST00000366767 SRD5A1P18405 259 aa4.29□□□□□ -1.72
CDC42BPA-204ENST00000366767 DUX3Q96PT4 197 aa4.29□□□□□ -1.72
CDC42BPA-204ENST00000366767 UBL5Q9BZL1 73 aa4.29□□□□□ -1.72
CDC42BPA-204ENST00000366767 C22orf46C9J442 243 aa4.29□□□□□ -1.72
CDC42BPA-204ENST00000366767 RNF183Q96D59 192 aa4.29□□□□□ -1.72
CDC42BPA-204ENST00000366767 EXPH5Q8NEV8 1989 aa4.28□□□□□ -1.72
CDC42BPA-204ENST00000366767 Q86TA4 180 aa4.28□□□□□ -1.72
CDC42BPA-204ENST00000366767 TIMM21Q9BVV7 248 aa4.28□□□□□ -1.72
CDC42BPA-204ENST00000366767 PRO1854Q9UHT4 67 aa4.28□□□□□ -1.72
CDC42BPA-204ENST00000366767 IGHV3OR16-13A0A075B7E8 117 aa4.28□□□□□ -1.72
CDC42BPA-204ENST00000366767 IGHV3-74A0A0B4J1X5 117 aa4.28□□□□□ -1.72
CDC42BPA-204ENST00000366767 CD7P09564 240 aa4.28□□□□□ -1.72
CDC42BPA-204ENST00000366767 SLC25A16P16260 332 aa4.28□□□□□ -1.72
CDC42BPA-204ENST00000366767 MALP21145 153 aa4.28□□□□□ -1.72
CDC42BPA-204ENST00000366767 HLA-DMBP28068 263 aa4.28□□□□□ -1.72
CDC42BPA-204ENST00000366767 FXYD5Q96DB9 178 aa4.28□□□□□ -1.72
CDC42BPA-204ENST00000366767 IGHV3-35A0A0C4DH35 117 aa4.28□□□□□ -1.72
CDC42BPA-204ENST00000366767 K7EN84 100 aa4.28□□□□□ -1.72
CDC42BPA-204ENST00000366767 K7ENP7 123 aa4.28□□□□□ -1.72
CDC42BPA-204ENST00000366767 SRRM4A7MD48 611 aaKnown RBP4.28□□□□□ -1.72
CDC42BPA-204ENST00000366767 ATOX1O00244 68 aa4.28□□□□□ -1.72
CDC42BPA-204ENST00000366767 RCHY1Q96PM5 261 aa4.28□□□□□ -1.72
CDC42BPA-204ENST00000366767 IGKV2-40A0A087WW87 121 aaPredicted RBP4.28□□□□□ -1.72
CDC42BPA-204ENST00000366767 TRBV6-1A0A0K0K1D8 114 aa4.28□□□□□ -1.72
CDC42BPA-204ENST00000366767 TAX1BP3O14907 124 aa4.28□□□□□ -1.72
CDC42BPA-204ENST00000366767 NPYP01303 97 aa4.28□□□□□ -1.72
CDC42BPA-204ENST00000366767 IGKV2D-40P01614 121 aaPredicted RBP4.28□□□□□ -1.72
CDC42BPA-204ENST00000366767 WT1-ASQ06250 92 aa4.28□□□□□ -1.72
CDC42BPA-204ENST00000366767 SIGLEC8Q9NYZ4 499 aa4.28□□□□□ -1.72
CDC42BPA-204ENST00000366767 CPAMD8Q8IZJ3 1885 aa4.28□□□□□ -1.72
CDC42BPA-204ENST00000366767 PAX4O43316 350 aa4.28□□□□□ -1.72
CDC42BPA-204ENST00000366767 TRBV7-1A0A0A6YYK4 115 aa4.28□□□□□ -1.72
CDC42BPA-204ENST00000366767 H3BRN7 92 aa4.27□□□□□ -1.73
CDC42BPA-204ENST00000366767 FSTL3O95633 263 aa4.27□□□□□ -1.73
CDC42BPA-204ENST00000366767 SCRT2Q9NQ03 307 aa4.27□□□□□ -1.73
CDC42BPA-204ENST00000366767 MALRD1Q5VYJ5 2156 aa4.27□□□□□ -1.73
CDC42BPA-204ENST00000366767 IGHV3-49A0A0A0MS15 119 aa4.27□□□□□ -1.73
CDC42BPA-204ENST00000366767 ADARB2-AS1A8MUL3 147 aa4.27□□□□□ -1.73
CDC42BPA-204ENST00000366767 IGLL5B9A064 214 aa4.27□□□□□ -1.73
CDC42BPA-204ENST00000366767 OVOL1O14753 267 aa4.27□□□□□ -1.73
CDC42BPA-204ENST00000366767 EFNA4P52798 201 aa4.27□□□□□ -1.73
CDC42BPA-204ENST00000366767 DSCAMO60469 2012 aa4.27□□□□□ -1.73
CDC42BPA-204ENST00000366767 PRSS46E5RG02 174 aa4.27□□□□□ -1.73
CDC42BPA-204ENST00000366767 CD24P25063 80 aa4.27□□□□□ -1.73
CDC42BPA-204ENST00000366767 FOXI2Q6ZQN5 318 aa4.27□□□□□ -1.73
CDC42BPA-204ENST00000366767 SEM1Q6ZVN7 128 aa4.27□□□□□ -1.73
CDC42BPA-204ENST00000366767 FAM236AA0A1B0GUQ0 79 aa4.27□□□□□ -1.73
CDC42BPA-204ENST00000366767 FAM236BA0A1B0GV22 79 aa4.27□□□□□ -1.73
CDC42BPA-204ENST00000366767 FOXI1Q12951 378 aa4.27□□□□□ -1.73
CDC42BPA-204ENST00000366767 CUL9Q8IWT3 2517 aa4.27□□□□□ -1.73
CDC42BPA-204ENST00000366767 BRWD1-AS2P59051 145 aa4.27□□□□□ -1.73
CDC42BPA-204ENST00000366767 TRBV19A0A075B6N1 114 aa4.27□□□□□ -1.73
CDC42BPA-204ENST00000366767 VMO1Q7Z5L0 202 aa4.27□□□□□ -1.73
CDC42BPA-204ENST00000366767 EXOC3-AS1Q8N2X6 119 aa4.27□□□□□ -1.73
CDC42BPA-204ENST00000366767 C3orf56Q8N813 242 aa4.27□□□□□ -1.73
CDC42BPA-204ENST00000366767 Q8N8P6 123 aa4.27□□□□□ -1.73
CDC42BPA-204ENST00000366767 VCYO14598 125 aa4.27□□□□□ -1.73
CDC42BPA-204ENST00000366767 DAZAP2Q15038 168 aaPredicted RBP4.27□□□□□ -1.73
CDC42BPA-204ENST00000366767 MRPL55Q7Z7F7 128 aaKnown RBP4.27□□□□□ -1.73
CDC42BPA-204ENST00000366767 PROP1O75360 226 aa4.26□□□□□ -1.73
CDC42BPA-204ENST00000366767 COL8A2P25067 703 aa4.26□□□□□ -1.73
CDC42BPA-204ENST00000366767 IGF2BP2-AS1Q96M15 143 aa4.26□□□□□ -1.73
CDC42BPA-204ENST00000366767 LTAP01374 205 aa4.26□□□□□ -1.73
CDC42BPA-204ENST00000366767 TRGV3P03979 118 aa4.26□□□□□ -1.73
CDC42BPA-204ENST00000366767 PRB4P10163 310 aaPredicted RBP4.26□□□□□ -1.73
CDC42BPA-204ENST00000366767 WT1P19544 449 aaPredicted RBP4.26□□□□□ -1.73
CDC42BPA-204ENST00000366767 WDR87Q6ZQQ6 2873 aa4.26□□□□□ -1.73
CDC42BPA-204ENST00000366767 HLA-DRB4P13762 266 aa4.26□□□□□ -1.73
CDC42BPA-204ENST00000366767 C9orf139Q6ZV77 190 aa4.26□□□□□ -1.73
CDC42BPA-204ENST00000366767 LINC00477Q96M19 166 aa4.26□□□□□ -1.73
CDC42BPA-204ENST00000366767 MSRB2Q9Y3D2 182 aa4.26□□□□□ -1.73
CDC42BPA-204ENST00000366767 HLA-DRB4X5D2U9 266 aa4.26□□□□□ -1.73
CDC42BPA-204ENST00000366767 ARMS2P0C7Q2 107 aa4.26□□□□□ -1.73
CDC42BPA-204ENST00000366767 FAM110DQ8TAY7 271 aaPredicted RBP4.26□□□□□ -1.73
CDC42BPA-204ENST00000366767 GLMPQ8WWB7 406 aa4.26□□□□□ -1.73
CDC42BPA-204ENST00000366767 CACNA1HO95180 2353 aa4.26□□□□□ -1.73
CDC42BPA-204ENST00000366767 FAM223BA6NKX1 122 aa4.26□□□□□ -1.73
CDC42BPA-204ENST00000366767 FAM223AQ8IWN6 122 aa4.26□□□□□ -1.73
CDC42BPA-204ENST00000366767 ATP6V0E2Q8NHE4 81 aa4.26□□□□□ -1.73
CDC42BPA-204ENST00000366767 DEFB104AQ8WTQ1 72 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms