RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 HLA-DRB4P13762 266 aa9.4□□□□□ -0.9
CDC42BPA-202ENST00000366764 HLA-DRB4X5D2U9 266 aa9.4□□□□□ -0.9
CDC42BPA-202ENST00000366764 RHODO00212 210 aa9.4□□□□□ -0.9
CDC42BPA-202ENST00000366764 PRSS57Q6UWY2 283 aa9.4□□□□□ -0.91
CDC42BPA-202ENST00000366764 TMEM213A2RRL7 107 aa9.4□□□□□ -0.91
CDC42BPA-202ENST00000366764 GP9P14770 177 aa9.4□□□□□ -0.91
CDC42BPA-202ENST00000366764 SRSF6Q13247 344 aaKnown RBP9.4□□□□□ -0.91
CDC42BPA-202ENST00000366764 PMVKQ15126 192 aa9.4□□□□□ -0.91
CDC42BPA-202ENST00000366764 TRPT1Q86TN4 253 aaKnown RBP9.39□□□□□ -0.91
CDC42BPA-202ENST00000366764 MYMXA0A1B0GTQ4 84 aa9.39□□□□□ -0.91
CDC42BPA-202ENST00000366764 SMKR1H3BMG3 65 aa9.39□□□□□ -0.91
CDC42BPA-202ENST00000366764 LY6G5BQ8NDX9 201 aa9.39□□□□□ -0.91
CDC42BPA-202ENST00000366764 FAM167A-AS1Q96KT0 104 aa9.39□□□□□ -0.91
CDC42BPA-202ENST00000366764 TIMM21Q9BVV7 248 aa9.39□□□□□ -0.91
CDC42BPA-202ENST00000366764 GTSF1LQ9H1H1 148 aa9.39□□□□□ -0.91
CDC42BPA-202ENST00000366764 MTORP42345 2549 aa9.39□□□□□ -0.91
CDC42BPA-202ENST00000366764 GATA3P23771 443 aa9.39□□□□□ -0.91
CDC42BPA-202ENST00000366764 ZNF415Q09FC8 603 aa9.39□□□□□ -0.91
CDC42BPA-202ENST00000366764 PLA2G2CQ5R387 149 aa9.39□□□□□ -0.91
CDC42BPA-202ENST00000366764 TMEM86BQ8N661 226 aa9.39□□□□□ -0.91
CDC42BPA-202ENST00000366764 IGF2-ASQ6U949 168 aa9.39□□□□□ -0.91
CDC42BPA-202ENST00000366764 C22orf46C9J442 243 aa9.39□□□□□ -0.91
CDC42BPA-202ENST00000366764 YPEL4Q96NS1 127 aa9.39□□□□□ -0.91
CDC42BPA-202ENST00000366764 C2orf66Q6UXQ4 117 aa9.39□□□□□ -0.91
CDC42BPA-202ENST00000366764 ANKRD17O75179 2603 aaKnown RBP9.38□□□□□ -0.91
CDC42BPA-202ENST00000366764 IGHV4-39P01824 125 aa9.38□□□□□ -0.91
CDC42BPA-202ENST00000366764 ZNF493Q6ZR52 646 aa9.38□□□□□ -0.91
CDC42BPA-202ENST00000366764 LHFPL4Q7Z7J7 247 aa9.38□□□□□ -0.91
CDC42BPA-202ENST00000366764 IL17RELQ6ZVW7 336 aa9.38□□□□□ -0.91
CDC42BPA-202ENST00000366764 IGHV3OR16-12A0A075B7B8 117 aa9.38□□□□□ -0.91
CDC42BPA-202ENST00000366764 GLMPQ8WWB7 406 aa9.38□□□□□ -0.91
CDC42BPA-202ENST00000366764 C8orf49Q96NF6 230 aa9.38□□□□□ -0.91
CDC42BPA-202ENST00000366764 HIGD1BQ9P298 99 aa9.38□□□□□ -0.91
CDC42BPA-202ENST00000366764 TRAV40A0A0B4J280 105 aa9.38□□□□□ -0.91
CDC42BPA-202ENST00000366764 SAA4P35542 130 aa9.38□□□□□ -0.91
CDC42BPA-202ENST00000366764 CEND1Q8N111 149 aa9.38□□□□□ -0.91
CDC42BPA-202ENST00000366764 LINC00574Q9H8X3 128 aa9.38□□□□□ -0.91
CDC42BPA-202ENST00000366764 PRB3Q04118 309 aaPredicted RBP9.37□□□□□ -0.91
CDC42BPA-202ENST00000366764 ITLN2Q8WWU7 325 aaPredicted RBP9.37□□□□□ -0.91
CDC42BPA-202ENST00000366764 NAA38Q9BRA0 125 aaKnown RBP9.37□□□□□ -0.91
CDC42BPA-202ENST00000366764 IGHV3OR16-10A0A075B7F0 116 aa9.37□□□□□ -0.91
CDC42BPA-202ENST00000366764 S100A7L2Q5SY68 101 aa9.37□□□□□ -0.91
CDC42BPA-202ENST00000366764 FAM215AQ9Y5M1 114 aa9.37□□□□□ -0.91
CDC42BPA-202ENST00000366764 IGFL2Q6UWQ7 119 aa9.37□□□□□ -0.91
CDC42BPA-202ENST00000366764 C8orf86Q6ZUL3 223 aa9.37□□□□□ -0.91
CDC42BPA-202ENST00000366764 B4DSR2 109 aa9.37□□□□□ -0.91
CDC42BPA-202ENST00000366764 NDUFA4O00483 81 aa9.37□□□□□ -0.91
CDC42BPA-202ENST00000366764 NDUFS7O75251 213 aa9.37□□□□□ -0.91
CDC42BPA-202ENST00000366764 SPINK8P0C7L1 97 aa9.37□□□□□ -0.91
CDC42BPA-202ENST00000366764 RASL10AQ92737 203 aa9.37□□□□□ -0.91
CDC42BPA-202ENST00000366764 INAFM2P0DMQ5 153 aa9.36□□□□□ -0.91
CDC42BPA-202ENST00000366764 SSBP2P81877 361 aaPredicted RBP9.36□□□□□ -0.91
CDC42BPA-202ENST00000366764 C2orf82Q6UX34 121 aa9.36□□□□□ -0.91
CDC42BPA-202ENST00000366764 KLRD1Q13241 179 aa9.36□□□□□ -0.91
CDC42BPA-202ENST00000366764 OR13C6PQ8NH95 151 aa9.36□□□□□ -0.91
CDC42BPA-202ENST00000366764 SFTA2Q6UW10 78 aa9.36□□□□□ -0.91
CDC42BPA-202ENST00000366764 ZNF48Q96MX3 618 aaPredicted RBP9.36□□□□□ -0.91
CDC42BPA-202ENST00000366764 ATP6V0BQ99437 205 aa9.36□□□□□ -0.91
CDC42BPA-202ENST00000366764 VGLL1Q99990 258 aa9.36□□□□□ -0.91
CDC42BPA-202ENST00000366764 INSP01308 110 aa9.36□□□□□ -0.91
CDC42BPA-202ENST00000366764 H3BUA1 57 aa9.36□□□□□ -0.91
CDC42BPA-202ENST00000366764 ZNF491Q8N8L2 437 aa9.36□□□□□ -0.91
CDC42BPA-202ENST00000366764 A0A087WX48 190 aa9.36□□□□□ -0.91
CDC42BPA-202ENST00000366764 RHPN1-AS1Q9BWJ2 59 aa9.36□□□□□ -0.91
CDC42BPA-202ENST00000366764 HLA-DMBP28068 263 aa9.35□□□□□ -0.91
CDC42BPA-202ENST00000366764 DTX2Q86UW9 622 aa9.35□□□□□ -0.91
CDC42BPA-202ENST00000366764 TRGV2A0A075B6R0 118 aa9.35□□□□□ -0.91
CDC42BPA-202ENST00000366764 SPATA12Q7Z6I5 190 aa9.35□□□□□ -0.91
CDC42BPA-202ENST00000366764 COL8A2P25067 703 aa9.35□□□□□ -0.91
CDC42BPA-202ENST00000366764 RHOHQ15669 191 aa9.35□□□□□ -0.91
CDC42BPA-202ENST00000366764 CFAP161Q6P656 301 aa9.35□□□□□ -0.91
CDC42BPA-202ENST00000366764 ZNRD1Q9P1U0 126 aa9.35□□□□□ -0.91
CDC42BPA-202ENST00000366764 LEPROTO15243 131 aa9.34□□□□□ -0.91
CDC42BPA-202ENST00000366764 CCL25O15444 150 aa9.34□□□□□ -0.91
CDC42BPA-202ENST00000366764 SCRT2Q9NQ03 307 aa9.34□□□□□ -0.91
CDC42BPA-202ENST00000366764 MRPL35Q9NZE8 188 aaKnown RBP9.34□□□□□ -0.91
CDC42BPA-202ENST00000366764 LGALS1P09382 135 aaKnown RBP9.34□□□□□ -0.91
CDC42BPA-202ENST00000366764 RPL36AP83881 106 aaKnown RBP9.34□□□□□ -0.91
CDC42BPA-202ENST00000366764 ZNF876PQ49A33 203 aa9.34□□□□□ -0.91
CDC42BPA-202ENST00000366764 CRIP3Q6Q6R5 217 aa9.34□□□□□ -0.91
CDC42BPA-202ENST00000366764 RPL36ALQ969Q0 106 aaKnown RBP9.34□□□□□ -0.91
CDC42BPA-202ENST00000366764 NPYP01303 97 aa9.34□□□□□ -0.91
CDC42BPA-202ENST00000366764 CRPP02741 224 aa9.34□□□□□ -0.91
CDC42BPA-202ENST00000366764 CTRLP40313 264 aa9.34□□□□□ -0.91
CDC42BPA-202ENST00000366764 TP53TG1Q9Y2A0 90 aa9.34□□□□□ -0.91
CDC42BPA-202ENST00000366764 SLC25A20O43772 301 aa9.34□□□□□ -0.91
CDC42BPA-202ENST00000366764 STHQ8IWL8 128 aa9.34□□□□□ -0.91
CDC42BPA-202ENST00000366764 I3L3M4 83 aa9.34□□□□□ -0.91
CDC42BPA-202ENST00000366764 IGKV1-17P01599 117 aa9.34□□□□□ -0.91
CDC42BPA-202ENST00000366764 FXYD7P58549 80 aa9.34□□□□□ -0.92
CDC42BPA-202ENST00000366764 TGFAP01135 160 aa9.33□□□□□ -0.92
CDC42BPA-202ENST00000366764 NPBQ8NG41 125 aa9.33□□□□□ -0.92
CDC42BPA-202ENST00000366764 TPSG1Q9NRR2 321 aa9.33□□□□□ -0.92
CDC42BPA-202ENST00000366764 PRO1854Q9UHT4 67 aa9.33□□□□□ -0.92
CDC42BPA-202ENST00000366764 ATP6V0E1O15342 81 aa9.33□□□□□ -0.92
CDC42BPA-202ENST00000366764 PIP4P1Q86T03 277 aa9.33□□□□□ -0.92
CDC42BPA-202ENST00000366764 TMEM219Q86XT9 240 aa9.33□□□□□ -0.92
CDC42BPA-202ENST00000366764 ZNF688P0C7X2 276 aa9.33□□□□□ -0.92
CDC42BPA-202ENST00000366764 ETDBQ3ZM63 59 aa9.33□□□□□ -0.92
CDC42BPA-202ENST00000366764 MCRIP2Q9BUT9 160 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms