RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 SGK494Q96LW2 274 aa8.41□□□□□ -1.06
CSNK1E-202ENST00000366216 NRN1Q9NPD7 142 aa8.41□□□□□ -1.06
CSNK1E-202ENST00000366216 IL36BQ9NZH7 164 aa8.41□□□□□ -1.06
CSNK1E-202ENST00000366216 TRAV8-1A0A0A6YYK1 113 aa8.4□□□□□ -1.06
CSNK1E-202ENST00000366216 TGIF2-C20orf24A0A0A6YYL0 155 aa8.4□□□□□ -1.06
CSNK1E-202ENST00000366216 CXCL1P09341 107 aa8.4□□□□□ -1.06
CSNK1E-202ENST00000366216 HLA-DMBP28068 263 aa8.4□□□□□ -1.06
CSNK1E-202ENST00000366216 SYNJ2BPP57105 145 aa8.4□□□□□ -1.06
CSNK1E-202ENST00000366216 IGFL4Q6B9Z1 124 aa8.4□□□□□ -1.06
CSNK1E-202ENST00000366216 TCF24Q7RTU0 167 aa8.4□□□□□ -1.06
CSNK1E-202ENST00000366216 NHLRC2Q8NBF2 726 aa8.4□□□□□ -1.06
CSNK1E-202ENST00000366216 OR11H1Q8NG94 326 aa8.4□□□□□ -1.06
CSNK1E-202ENST00000366216 OR1N2Q8NGR9 330 aa8.4□□□□□ -1.06
CSNK1E-202ENST00000366216 C16orf92Q96LL3 132 aa8.4□□□□□ -1.06
CSNK1E-202ENST00000366216 RNASE7Q9H1E1 156 aaKnown RBP8.4□□□□□ -1.06
CSNK1E-202ENST00000366216 MLXQ9UH92 298 aa8.4□□□□□ -1.06
CSNK1E-202ENST00000366216 C19orf71A6NCJ1 209 aa8.39□□□□□ -1.07
CSNK1E-202ENST00000366216 C2orf70A6NJV1 201 aa8.39□□□□□ -1.07
CSNK1E-202ENST00000366216 ZNF705FA8MVS1 300 aaPredicted RBP8.39□□□□□ -1.07
CSNK1E-202ENST00000366216 GATCO43716 136 aaKnown RBP8.39□□□□□ -1.07
CSNK1E-202ENST00000366216 TYMSP04818 313 aa8.39□□□□□ -1.07
CSNK1E-202ENST00000366216 INSL3P51460 131 aa8.39□□□□□ -1.07
CSNK1E-202ENST00000366216 SAPCD1Q5SSQ6 148 aa8.39□□□□□ -1.07
CSNK1E-202ENST00000366216 NUDT10Q8NFP7 164 aa8.39□□□□□ -1.07
CSNK1E-202ENST00000366216 NUDT11Q96G61 164 aa8.39□□□□□ -1.07
CSNK1E-202ENST00000366216 FAM210BQ96KR6 192 aa8.39□□□□□ -1.07
CSNK1E-202ENST00000366216 PPP1R14DQ9NXH3 145 aa8.39□□□□□ -1.07
CSNK1E-202ENST00000366216 PEMTQ9UBM1 199 aa8.39□□□□□ -1.07
CSNK1E-202ENST00000366216 IGKV2-40A0A087WW87 121 aaPredicted RBP8.38□□□□□ -1.07
CSNK1E-202ENST00000366216 SMIM27A0A1W2PRY6 76 aa8.38□□□□□ -1.07
CSNK1E-202ENST00000366216 ZNF705GA8MUZ8 300 aaPredicted RBP8.38□□□□□ -1.07
CSNK1E-202ENST00000366216 IGKV2D-40P01614 121 aaPredicted RBP8.38□□□□□ -1.07
CSNK1E-202ENST00000366216 CBLN1P23435 193 aa8.38□□□□□ -1.07
CSNK1E-202ENST00000366216 SLURP1P55000 103 aa8.38□□□□□ -1.07
CSNK1E-202ENST00000366216 FHL3Q13643 280 aa8.38□□□□□ -1.07
CSNK1E-202ENST00000366216 CT83Q5H943 113 aa8.38□□□□□ -1.07
CSNK1E-202ENST00000366216 C9orf47Q6ZRZ4 202 aa8.38□□□□□ -1.07
CSNK1E-202ENST00000366216 GBGT1Q8N5D6 347 aa8.38□□□□□ -1.07
CSNK1E-202ENST00000366216 RNF182Q8N6D2 247 aa8.38□□□□□ -1.07
CSNK1E-202ENST00000366216 A0A1W2PPQ1 181 aa8.37□□□□□ -1.07
CSNK1E-202ENST00000366216 C1orf196B1AJZ1 125 aa8.37□□□□□ -1.07
CSNK1E-202ENST00000366216 PRAC2D3DTV9 90 aa8.37□□□□□ -1.07
CSNK1E-202ENST00000366216 NPIPB6E9PJ23 425 aa8.37□□□□□ -1.07
CSNK1E-202ENST00000366216 OVOL1O14753 267 aa8.37□□□□□ -1.07
CSNK1E-202ENST00000366216 EIF4EBP3O60516 100 aaPredicted RBP8.37□□□□□ -1.07
CSNK1E-202ENST00000366216 EDN2P20800 178 aa8.37□□□□□ -1.07
CSNK1E-202ENST00000366216 ID1P41134 155 aa8.37□□□□□ -1.07
CSNK1E-202ENST00000366216 RPS10P46783 165 aaKnown RBP8.37□□□□□ -1.07
CSNK1E-202ENST00000366216 FAM3BP58499 235 aaPredicted RBP8.37□□□□□ -1.07
CSNK1E-202ENST00000366216 RPL11P62913 178 aaKnown RBP8.37□□□□□ -1.07
CSNK1E-202ENST00000366216 PRR27Q6MZM9 219 aa8.37□□□□□ -1.07
CSNK1E-202ENST00000366216 LINC00322Q6ZN03 302 aaPredicted RBP8.37□□□□□ -1.07
CSNK1E-202ENST00000366216 OR4B1Q8NGF8 309 aa8.37□□□□□ -1.07
CSNK1E-202ENST00000366216 OR9G4Q8NGQ1 327 aa8.37□□□□□ -1.07
CSNK1E-202ENST00000366216 DAZAP1Q96EP5 407 aaKnown RBP8.37□□□□□ -1.07
CSNK1E-202ENST00000366216 VGLL1Q99990 258 aa8.37□□□□□ -1.07
CSNK1E-202ENST00000366216 NDFIP1Q9BT67 221 aa8.37□□□□□ -1.07
CSNK1E-202ENST00000366216 SRD5A3Q9H8P0 318 aa8.37□□□□□ -1.07
CSNK1E-202ENST00000366216 P01737 135 aa8.36□□□□□ -1.07
CSNK1E-202ENST00000366216 CT45A10P0DMU9 189 aa8.36□□□□□ -1.07
CSNK1E-202ENST00000366216 RPL19P84098 196 aaKnown RBP8.36□□□□□ -1.07
CSNK1E-202ENST00000366216 ZNF738Q8NE65 137 aa8.36□□□□□ -1.07
CSNK1E-202ENST00000366216 DCANP1Q8TF63 244 aa8.36□□□□□ -1.07
CSNK1E-202ENST00000366216 TSKUQ8WUA8 353 aa8.36□□□□□ -1.07
CSNK1E-202ENST00000366216 ZC2HC1AQ96GY0 325 aa8.36□□□□□ -1.07
CSNK1E-202ENST00000366216 C20orf173Q96LM9 149 aa8.36□□□□□ -1.07
CSNK1E-202ENST00000366216 RPP21Q9H633 154 aaKnown RBP8.36□□□□□ -1.07
CSNK1E-202ENST00000366216 TRAV2A0A0B4J234 112 aa8.35□□□□□ -1.07
CSNK1E-202ENST00000366216 FAM231BA6NCW3 169 aa8.35□□□□□ -1.07
CSNK1E-202ENST00000366216 A8MWL6 223 aa8.35□□□□□ -1.07
CSNK1E-202ENST00000366216 CRIP1P50238 77 aa8.35□□□□□ -1.07
CSNK1E-202ENST00000366216 ZNF138P52744 262 aa8.35□□□□□ -1.07
CSNK1E-202ENST00000366216 RAB5BP61020 215 aa8.35□□□□□ -1.07
CSNK1E-202ENST00000366216 TMEM78Q5T7P6 136 aa8.35□□□□□ -1.07
CSNK1E-202ENST00000366216 IL17DQ8TAD2 202 aa8.35□□□□□ -1.07
CSNK1E-202ENST00000366216 DLX4Q92988 240 aaPredicted RBP8.35□□□□□ -1.07
CSNK1E-202ENST00000366216 LINC00477Q96M19 166 aa8.35□□□□□ -1.07
CSNK1E-202ENST00000366216 GFRA4Q9GZZ7 299 aa8.35□□□□□ -1.07
CSNK1E-202ENST00000366216 AGPAT4-IT1Q9H0P7 198 aa8.35□□□□□ -1.07
CSNK1E-202ENST00000366216 MS4A6AQ9H2W1 248 aa8.35□□□□□ -1.07
CSNK1E-202ENST00000366216 LENEPQ9Y5L5 61 aa8.35□□□□□ -1.07
CSNK1E-202ENST00000366216 K7EQG2 157 aa8.34□□□□□ -1.07
CSNK1E-202ENST00000366216 CSN3P07498 182 aa8.34□□□□□ -1.07
CSNK1E-202ENST00000366216 ERCC8Q13216 396 aa8.34□□□□□ -1.07
CSNK1E-202ENST00000366216 SMUG1Q53HV7 270 aa8.34□□□□□ -1.07
CSNK1E-202ENST00000366216 FAM162BQ5T6X4 162 aa8.34□□□□□ -1.07
CSNK1E-202ENST00000366216 OR10J6PQ8NGY7 276 aa8.34□□□□□ -1.07
CSNK1E-202ENST00000366216 LINC00476Q8WZB0 136 aa8.34□□□□□ -1.07
CSNK1E-202ENST00000366216 C8orf49Q96NF6 230 aa8.34□□□□□ -1.07
CSNK1E-202ENST00000366216 SPATA25Q9BR10 227 aa8.34□□□□□ -1.07
CSNK1E-202ENST00000366216 SIGLEC8Q9NYZ4 499 aa8.34□□□□□ -1.07
CSNK1E-202ENST00000366216 IGKV3-7A0A075B6H7 116 aa8.33□□□□□ -1.08
CSNK1E-202ENST00000366216 TRBV7-9A0A0J9YWB2 115 aa8.33□□□□□ -1.08
CSNK1E-202ENST00000366216 IZUMO1RA6ND01 250 aa8.33□□□□□ -1.08
CSNK1E-202ENST00000366216 LCE2BO14633 110 aa8.33□□□□□ -1.08
CSNK1E-202ENST00000366216 IGHV4-30-4P0DP06 118 aa8.33□□□□□ -1.08
CSNK1E-202ENST00000366216 PAFAH1B2P68402 229 aa8.33□□□□□ -1.08
CSNK1E-202ENST00000366216 COX19Q49B96 90 aa8.33□□□□□ -1.08
CSNK1E-202ENST00000366216 Q8TAT8 98 aa8.33□□□□□ -1.08
CSNK1E-202ENST00000366216 NAT8BQ9UHF3 227 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms