RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 FABP5P3A8MUU1 101 aa13.36□□□□□ -0.27
CCDC7-203ENST00000362006 NUDT10Q8NFP7 164 aa13.36□□□□□ -0.27
CCDC7-203ENST00000362006 NUDT11Q96G61 164 aa13.36□□□□□ -0.27
CCDC7-203ENST00000362006 RNASE7Q9H1E1 156 aaKnown RBP13.36□□□□□ -0.27
CCDC7-203ENST00000362006 GATCO43716 136 aaKnown RBP13.36□□□□□ -0.27
CCDC7-203ENST00000362006 P01737 135 aa13.36□□□□□ -0.27
CCDC7-203ENST00000362006 GPX1P07203 203 aa13.36□□□□□ -0.27
CCDC7-203ENST00000362006 CD7P09564 240 aa13.36□□□□□ -0.27
CCDC7-203ENST00000362006 ZFAND2AQ8N6M9 145 aa13.36□□□□□ -0.27
CCDC7-203ENST00000362006 SMCO4Q9NRQ5 59 aa13.36□□□□□ -0.27
CCDC7-203ENST00000362006 STHQ8IWL8 128 aa13.35□□□□□ -0.27
CCDC7-203ENST00000362006 C19orf73Q9NVV2 129 aa13.35□□□□□ -0.27
CCDC7-203ENST00000362006 VWFP04275 2813 aa13.35□□□□□ -0.27
CCDC7-203ENST00000362006 ZNF705GA8MUZ8 300 aaPredicted RBP13.34□□□□□ -0.27
CCDC7-203ENST00000362006 CRIP1P50238 77 aa13.34□□□□□ -0.27
CCDC7-203ENST00000362006 LINC00322Q6ZN03 302 aaPredicted RBP13.34□□□□□ -0.27
CCDC7-203ENST00000362006 TUBA4BQ9H853 241 aa13.34□□□□□ -0.27
CCDC7-203ENST00000362006 NOTCH3Q9UM47 2321 aa13.34□□□□□ -0.27
CCDC7-203ENST00000362006 KLLNB2CW77 178 aa13.34□□□□□ -0.27
CCDC7-203ENST00000362006 PFN1P07737 140 aaKnown RBP13.34□□□□□ -0.27
CCDC7-203ENST00000362006 AMTNQ6UX39 209 aa13.34□□□□□ -0.27
CCDC7-203ENST00000362006 IMMP2LQ96T52 175 aa13.34□□□□□ -0.27
CCDC7-203ENST00000362006 V9GYV3 84 aa13.34□□□□□ -0.27
CCDC7-203ENST00000362006 SH2D1AO60880 128 aa13.33□□□□□ -0.28
CCDC7-203ENST00000362006 IGKV3-20P01619 116 aa13.33□□□□□ -0.28
CCDC7-203ENST00000362006 CDKN1BP46527 198 aa13.33□□□□□ -0.28
CCDC7-203ENST00000362006 ZNF124Q15973 351 aa13.33□□□□□ -0.28
CCDC7-203ENST00000362006 CT83Q5H943 113 aa13.33□□□□□ -0.28
CCDC7-203ENST00000362006 RPP21Q9H633 154 aaKnown RBP13.33□□□□□ -0.28
CCDC7-203ENST00000362006 AGRNO00468 2067 aa13.33□□□□□ -0.28
CCDC7-203ENST00000362006 SCO1O75880 301 aa13.33□□□□□ -0.28
CCDC7-203ENST00000362006 ZNF80P51504 273 aaPredicted RBP13.33□□□□□ -0.28
CCDC7-203ENST00000362006 TRAV21A0A0B4J279 112 aa13.32□□□□□ -0.28
CCDC7-203ENST00000362006 Q6AWC8 147 aa13.32□□□□□ -0.28
CCDC7-203ENST00000362006 AMBPP02760 352 aa13.31□□□□□ -0.28
CCDC7-203ENST00000362006 NUTF2P61970 127 aaKnown RBP13.31□□□□□ -0.28
CCDC7-203ENST00000362006 TRPT1Q86TN4 253 aaKnown RBP13.31□□□□□ -0.28
CCDC7-203ENST00000362006 A8MWL6 223 aa13.31□□□□□ -0.28
CCDC7-203ENST00000362006 S100PP25815 95 aa13.31□□□□□ -0.28
CCDC7-203ENST00000362006 RNASE4P34096 147 aaKnown RBP13.31□□□□□ -0.28
CCDC7-203ENST00000362006 IL36BQ9NZH7 164 aa13.31□□□□□ -0.28
CCDC7-203ENST00000362006 XKRY2A2RUG3 117 aa13.3□□□□□ -0.28
CCDC7-203ENST00000362006 RPS20P60866 119 aaKnown RBP13.3□□□□□ -0.28
CCDC7-203ENST00000362006 BTN1A1Q13410 526 aa13.3□□□□□ -0.28
CCDC7-203ENST00000362006 KCNIP4Q6PIL6 250 aa13.3□□□□□ -0.28
CCDC7-203ENST00000362006 OR2D3Q8NGH3 330 aa13.3□□□□□ -0.28
CCDC7-203ENST00000362006 C7orf71A4D174 169 aa13.3□□□□□ -0.28
CCDC7-203ENST00000362006 TMEM189A5PLL7 270 aa13.3□□□□□ -0.28
CCDC7-203ENST00000362006 PRR9Q5T870 116 aa13.3□□□□□ -0.28
CCDC7-203ENST00000362006 TMEM88Q6PEY1 159 aa13.3□□□□□ -0.28
CCDC7-203ENST00000362006 J3KRW8 73 aa13.29□□□□□ -0.28
CCDC7-203ENST00000362006 EGFEM1PQ0D2K5 195 aa13.29□□□□□ -0.28
CCDC7-203ENST00000362006 SPINK13Q1W4C9 94 aa13.29□□□□□ -0.28
CCDC7-203ENST00000362006 OXLD1Q5BKU9 147 aa13.29□□□□□ -0.28
CCDC7-203ENST00000362006 CBLN2Q8IUK8 224 aa13.29□□□□□ -0.28
CCDC7-203ENST00000362006 TSKUQ8WUA8 353 aa13.29□□□□□ -0.28
CCDC7-203ENST00000362006 FAM231BA6NCW3 169 aa13.28□□□□□ -0.28
CCDC7-203ENST00000362006 RBMY1BA6NDE4 496 aaKnown RBP13.28□□□□□ -0.28
CCDC7-203ENST00000362006 RBMY1EA6NEQ0 496 aaKnown RBP13.28□□□□□ -0.28
CCDC7-203ENST00000362006 M0R2Z0 102 aa13.28□□□□□ -0.28
CCDC7-203ENST00000362006 RBMY1DP0C7P1 496 aaKnown RBP13.28□□□□□ -0.28
CCDC7-203ENST00000362006 LINC01559Q495D7 138 aa13.28□□□□□ -0.28
CCDC7-203ENST00000362006 GFRA4Q9GZZ7 299 aa13.28□□□□□ -0.28
CCDC7-203ENST00000362006 ORM1P02763 201 aa13.28□□□□□ -0.28
CCDC7-203ENST00000362006 KRTAP21-3Q3LHN1 58 aa13.27□□□□□ -0.28
CCDC7-203ENST00000362006 GFI1BQ5VTD9 330 aa13.27□□□□□ -0.28
CCDC7-203ENST00000362006 MORN3Q6PF18 240 aaPredicted RBP13.27□□□□□ -0.28
CCDC7-203ENST00000362006 DEFB125Q8N687 156 aa13.27□□□□□ -0.28
CCDC7-203ENST00000362006 BTF3L4Q96K17 158 aa13.27□□□□□ -0.28
CCDC7-203ENST00000362006 C20orf144Q9BQM9 153 aa13.27□□□□□ -0.28
CCDC7-203ENST00000362006 TRAV9-1A0A075B6T8 112 aa13.27□□□□□ -0.29
CCDC7-203ENST00000362006 SMIM27A0A1W2PRY6 76 aa13.27□□□□□ -0.29
CCDC7-203ENST00000362006 ZNF324O75467 553 aaPredicted RBP13.26□□□□□ -0.29
CCDC7-203ENST00000362006 KIR3DS1Q14943 382 aa13.26□□□□□ -0.29
CCDC7-203ENST00000362006 Q8N1Y9 231 aa13.26□□□□□ -0.29
CCDC7-203ENST00000362006 WFDC10AQ9H1F0 79 aa13.26□□□□□ -0.29
CCDC7-203ENST00000362006 TRAV12-3A0A0B4J271 114 aa13.25□□□□□ -0.29
CCDC7-203ENST00000362006 KCNS1Q96KK3 526 aa13.25□□□□□ -0.29
CCDC7-203ENST00000362006 TRAV12-2A0A075B6T6 113 aa13.25□□□□□ -0.29
CCDC7-203ENST00000362006 CA1P00915 261 aaPredicted RBP13.25□□□□□ -0.29
CCDC7-203ENST00000362006 CXCL1P09341 107 aa13.25□□□□□ -0.29
CCDC7-203ENST00000362006 RPL19P84098 196 aaKnown RBP13.25□□□□□ -0.29
CCDC7-203ENST00000362006 C1QTNF4Q9BXJ3 329 aa13.25□□□□□ -0.29
CCDC7-203ENST00000362006 NAT8BQ9UHF3 227 aa13.25□□□□□ -0.29
CCDC7-203ENST00000362006 URGCP-MRPS24S4R325 110 aa13.25□□□□□ -0.29
CCDC7-203ENST00000362006 CRXO43186 299 aaPredicted RBP13.24□□□□□ -0.29
CCDC7-203ENST00000362006 FOXA3P55318 350 aaPredicted RBP13.24□□□□□ -0.29
CCDC7-203ENST00000362006 FXYD7P58549 80 aa13.24□□□□□ -0.29
CCDC7-203ENST00000362006 ELOBQ15370 118 aa13.24□□□□□ -0.29
CCDC7-203ENST00000362006 TRRAPQ9Y4A5 3859 aa13.24□□□□□ -0.29
CCDC7-203ENST00000362006 IGKV3D-20A0A0C4DH25 116 aa13.24□□□□□ -0.29
CCDC7-203ENST00000362006 INSP01308 110 aa13.24□□□□□ -0.29
CCDC7-203ENST00000362006 SAMD5Q5TGI4 173 aa13.24□□□□□ -0.29
CCDC7-203ENST00000362006 FAM159AQ6UWV7 190 aa13.24□□□□□ -0.29
CCDC7-203ENST00000362006 SRD5A3Q9H8P0 318 aa13.24□□□□□ -0.29
CCDC7-203ENST00000362006 C11orf21Q9P2W6 132 aa13.24□□□□□ -0.29
CCDC7-203ENST00000362006 A0A1W2PPQ1 181 aa13.23□□□□□ -0.29
CCDC7-203ENST00000362006 FAM3BP58499 235 aaPredicted RBP13.23□□□□□ -0.29
CCDC7-203ENST00000362006 YPEL4Q96NS1 127 aa13.23□□□□□ -0.29
CCDC7-203ENST00000362006 NEU1Q99519 415 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms