RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 RAB1BQ9H0U4 201 aa8.16□□□□□ -1.1
SMC3-201ENST00000361804 IGKV3D-20A0A0C4DH25 116 aa8.16□□□□□ -1.1
SMC3-201ENST00000361804 A0A0G2JLM5 398 aa8.16□□□□□ -1.1
SMC3-201ENST00000361804 RPL7P18124 248 aaKnown RBP8.16□□□□□ -1.1
SMC3-201ENST00000361804 C11orf71Q6IPW1 123 aa8.16□□□□□ -1.1
SMC3-201ENST00000361804 PSMG3-AS1Q96PY0 264 aa8.16□□□□□ -1.1
SMC3-201ENST00000361804 FOXC2Q99958 501 aa8.16□□□□□ -1.1
SMC3-201ENST00000361804 KLK15Q9H2R5 256 aa8.16□□□□□ -1.1
SMC3-201ENST00000361804 ODF3BA8MYP8 253 aa8.15□□□□□ -1.1
SMC3-201ENST00000361804 Q6AWC8 147 aa8.15□□□□□ -1.1
SMC3-201ENST00000361804 RAXQ9Y2V3 346 aa8.15□□□□□ -1.1
SMC3-201ENST00000361804 ATP6V0E1O15342 81 aa8.15□□□□□ -1.1
SMC3-201ENST00000361804 EFNA4P52798 201 aa8.15□□□□□ -1.1
SMC3-201ENST00000361804 PDE6HQ13956 83 aa8.15□□□□□ -1.1
SMC3-201ENST00000361804 DTX2Q86UW9 622 aa8.15□□□□□ -1.1
SMC3-201ENST00000361804 TMEM219Q86XT9 240 aa8.15□□□□□ -1.1
SMC3-201ENST00000361804 MTURNQ8N3F0 131 aa8.15□□□□□ -1.1
SMC3-201ENST00000361804 FBXL19-AS1Q494R0 122 aa8.15□□□□□ -1.11
SMC3-201ENST00000361804 SAPCD1Q5SSQ6 148 aa8.15□□□□□ -1.11
SMC3-201ENST00000361804 LCNL1Q6ZST4 164 aa8.15□□□□□ -1.11
SMC3-201ENST00000361804 AP1S3Q96PC3 154 aa8.15□□□□□ -1.11
SMC3-201ENST00000361804 IGKV3-7A0A075B6H7 116 aa8.14□□□□□ -1.11
SMC3-201ENST00000361804 TTC9CQ8N5M4 171 aa8.14□□□□□ -1.11
SMC3-201ENST00000361804 TMEM160Q9NX00 188 aa8.14□□□□□ -1.11
SMC3-201ENST00000361804 MSRB2Q9Y3D2 182 aa8.14□□□□□ -1.11
SMC3-201ENST00000361804 A0A1B0GW15 77 aa8.14□□□□□ -1.11
SMC3-201ENST00000361804 C9orf118A6NHY6 69 aa8.14□□□□□ -1.11
SMC3-201ENST00000361804 PRTN3P24158 256 aa8.14□□□□□ -1.11
SMC3-201ENST00000361804 RNF5Q99942 180 aa8.14□□□□□ -1.11
SMC3-201ENST00000361804 VKORC1Q9BQB6 163 aa8.14□□□□□ -1.11
SMC3-201ENST00000361804 AGPAT4-IT1Q9H0P7 198 aa8.14□□□□□ -1.11
SMC3-201ENST00000361804 CEACAM3P40198 252 aa8.14□□□□□ -1.11
SMC3-201ENST00000361804 ODF1Q14990 250 aa8.14□□□□□ -1.11
SMC3-201ENST00000361804 UFSP1Q6NVU6 142 aa8.14□□□□□ -1.11
SMC3-201ENST00000361804 Q8N9W7 124 aa8.14□□□□□ -1.11
SMC3-201ENST00000361804 CSPG4Q6UVK1 2322 aa8.14□□□□□ -1.11
SMC3-201ENST00000361804 TRAV40A0A0B4J280 105 aa8.14□□□□□ -1.11
SMC3-201ENST00000361804 MAP1LC3AQ9H492 121 aa8.14□□□□□ -1.11
SMC3-201ENST00000361804 HHLA3Q9XRX5 114 aa8.14□□□□□ -1.11
SMC3-201ENST00000361804 SORL1Q92673 2214 aa8.13□□□□□ -1.11
SMC3-201ENST00000361804 PRR9Q5T870 116 aa8.13□□□□□ -1.11
SMC3-201ENST00000361804 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.13□□□□□ -1.11
SMC3-201ENST00000361804 CLPSL1A2RUU4 121 aa8.13□□□□□ -1.11
SMC3-201ENST00000361804 SEC11AP67812 179 aa8.13□□□□□ -1.11
SMC3-201ENST00000361804 ZC2HC1BQ5TFG8 222 aa8.13□□□□□ -1.11
SMC3-201ENST00000361804 MAPKAPK5-AS1Q8N8E1 139 aa8.13□□□□□ -1.11
SMC3-201ENST00000361804 OR2K2Q8NGT1 345 aa8.13□□□□□ -1.11
SMC3-201ENST00000361804 CCDC140Q96MF4 163 aa8.13□□□□□ -1.11
SMC3-201ENST00000361804 DOPEY2Q9Y3R5 2298 aa8.13□□□□□ -1.11
SMC3-201ENST00000361804 TMEM8BA6NDV4 472 aa8.13□□□□□ -1.11
SMC3-201ENST00000361804 FABP5P3A8MUU1 101 aa8.13□□□□□ -1.11
SMC3-201ENST00000361804 BUB3O43684 328 aa8.12□□□□□ -1.11
SMC3-201ENST00000361804 SRSF8Q9BRL6 282 aaKnown RBP8.12□□□□□ -1.11
SMC3-201ENST00000361804 ZFAND3Q9H8U3 227 aa8.12□□□□□ -1.11
SMC3-201ENST00000361804 APCP25054 2843 aa8.12□□□□□ -1.11
SMC3-201ENST00000361804 GOSR1O95249 250 aa8.12□□□□□ -1.11
SMC3-201ENST00000361804 HSD52Q0P140 79 aa8.12□□□□□ -1.11
SMC3-201ENST00000361804 COTL1Q14019 142 aa8.12□□□□□ -1.11
SMC3-201ENST00000361804 TIMD4Q96H15 378 aa8.12□□□□□ -1.11
SMC3-201ENST00000361804 MRPL35Q9NZE8 188 aaKnown RBP8.12□□□□□ -1.11
SMC3-201ENST00000361804 SPCS1Q9Y6A9 102 aa8.12□□□□□ -1.11
SMC3-201ENST00000361804 TRAV8-2A0A0B4J237 113 aa8.12□□□□□ -1.11
SMC3-201ENST00000361804 H3BRM9 83 aa8.12□□□□□ -1.11
SMC3-201ENST00000361804 H3BVH4 76 aa8.12□□□□□ -1.11
SMC3-201ENST00000361804 PPBPP02775 128 aa8.12□□□□□ -1.11
SMC3-201ENST00000361804 BMI1P35226 326 aa8.12□□□□□ -1.11
SMC3-201ENST00000361804 Q8N6K4 173 aa8.12□□□□□ -1.11
SMC3-201ENST00000361804 GLMPQ8WWB7 406 aa8.11□□□□□ -1.11
SMC3-201ENST00000361804 NHP2Q9NX24 153 aaKnown RBP8.11□□□□□ -1.11
SMC3-201ENST00000361804 A6NDN8 102 aa8.11□□□□□ -1.11
SMC3-201ENST00000361804 WFDC12Q8WWY7 111 aa8.11□□□□□ -1.11
SMC3-201ENST00000361804 K7EP34 96 aa8.11□□□□□ -1.11
SMC3-201ENST00000361804 TRBV12-3P01733 135 aa8.11□□□□□ -1.11
SMC3-201ENST00000361804 ZNF502Q8TBZ5 544 aa8.11□□□□□ -1.11
SMC3-201ENST00000361804 NF1P21359 2839 aa8.11□□□□□ -1.11
SMC3-201ENST00000361804 SMIM17P0DL12 118 aa8.1□□□□□ -1.11
SMC3-201ENST00000361804 CHAC1Q9BUX1 264 aa8.1□□□□□ -1.11
SMC3-201ENST00000361804 TRBV25-1A0A075B6N4 114 aa8.1□□□□□ -1.11
SMC3-201ENST00000361804 A0A1W2PPM0 123 aa8.1□□□□□ -1.11
SMC3-201ENST00000361804 FCER1GP30273 86 aa8.1□□□□□ -1.11
SMC3-201ENST00000361804 SAA4P35542 130 aa8.1□□□□□ -1.11
SMC3-201ENST00000361804 NEGR1Q7Z3B1 354 aa8.1□□□□□ -1.11
SMC3-201ENST00000361804 OR1N2Q8NGR9 330 aa8.1□□□□□ -1.11
SMC3-201ENST00000361804 PDZD2O15018 2839 aa8.1□□□□□ -1.11
SMC3-201ENST00000361804 CREBBPQ92793 2442 aa8.1□□□□□ -1.11
SMC3-201ENST00000361804 F6UB75 175 aa8.1□□□□□ -1.11
SMC3-201ENST00000361804 C20orf173Q96LM9 149 aa8.1□□□□□ -1.11
SMC3-201ENST00000361804 IGHV7-4-1A0A0J9YVY3 117 aa8.1□□□□□ -1.11
SMC3-201ENST00000361804 M0R381 172 aa8.1□□□□□ -1.11
SMC3-201ENST00000361804 IGKCP01834 107 aa8.1□□□□□ -1.11
SMC3-201ENST00000361804 C8orf86Q6ZUL3 223 aa8.1□□□□□ -1.11
SMC3-201ENST00000361804 RPL24P83731 157 aaKnown RBP8.09□□□□□ -1.11
SMC3-201ENST00000361804 AMTNQ6UX39 209 aa8.09□□□□□ -1.11
SMC3-201ENST00000361804 IGLV2-18A0A075B6J9 118 aa8.09□□□□□ -1.12
SMC3-201ENST00000361804 K7ERU9 68 aa8.09□□□□□ -1.12
SMC3-201ENST00000361804 M0R1W7 72 aa8.09□□□□□ -1.12
SMC3-201ENST00000361804 SAMD5Q5TGI4 173 aa8.09□□□□□ -1.12
SMC3-201ENST00000361804 SFTA2Q6UW10 78 aa8.09□□□□□ -1.12
SMC3-201ENST00000361804 OR9G4Q8NGQ1 327 aa8.09□□□□□ -1.12
SMC3-201ENST00000361804 RPL39LQ96EH5 51 aaKnown RBP8.09□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms