RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 Q8N8P6 123 aa8.7□□□□□ -1.02
CLIP1-203ENST00000361654 F8W735 103 aaPredicted RBP8.7□□□□□ -1.02
CLIP1-203ENST00000361654 WIPF2Q8TF74 440 aaPredicted RBP8.7□□□□□ -1.02
CLIP1-203ENST00000361654 NDUFS7O75251 213 aa8.7□□□□□ -1.02
CLIP1-203ENST00000361654 IGLV2-23P01705 113 aa8.7□□□□□ -1.02
CLIP1-203ENST00000361654 C8orf31Q8N9H6 132 aa8.7□□□□□ -1.02
CLIP1-203ENST00000361654 A8MWP6 167 aa8.69□□□□□ -1.02
CLIP1-203ENST00000361654 GAGE2BQ13066 116 aa8.69□□□□□ -1.02
CLIP1-203ENST00000361654 PRR25Q96S07 402 aa8.69□□□□□ -1.02
CLIP1-203ENST00000361654 U3KQE9 123 aa8.69□□□□□ -1.02
CLIP1-203ENST00000361654 ETDCA0A1B0GVM5 59 aa8.69□□□□□ -1.02
CLIP1-203ENST00000361654 BUB3O43684 328 aa8.69□□□□□ -1.02
CLIP1-203ENST00000361654 CFPP27918 469 aa8.69□□□□□ -1.02
CLIP1-203ENST00000361654 INSL3P51460 131 aa8.69□□□□□ -1.02
CLIP1-203ENST00000361654 GREB1Q4ZG55 1949 aa8.68□□□□□ -1.02
CLIP1-203ENST00000361654 FAM208BQ5VWN6 2430 aa8.68□□□□□ -1.02
CLIP1-203ENST00000361654 SBF1O95248 1867 aa8.68□□□□□ -1.02
CLIP1-203ENST00000361654 CENPVL3A0A0U1RRI6 287 aa8.68□□□□□ -1.02
CLIP1-203ENST00000361654 QRFPP83859 136 aa8.68□□□□□ -1.02
CLIP1-203ENST00000361654 UBL5Q9BZL1 73 aa8.68□□□□□ -1.02
CLIP1-203ENST00000361654 TP53BP1Q12888 1972 aaPredicted RBP8.68□□□□□ -1.02
CLIP1-203ENST00000361654 FANCMQ8IYD8 2048 aa8.68□□□□□ -1.02
CLIP1-203ENST00000361654 C15orf53Q8NAA6 179 aa8.68□□□□□ -1.02
CLIP1-203ENST00000361654 DSCR8Q96T75 97 aa8.68□□□□□ -1.02
CLIP1-203ENST00000361654 PROK2Q9HC23 129 aa8.68□□□□□ -1.02
CLIP1-203ENST00000361654 ANAPC13Q9BS18 74 aa8.68□□□□□ -1.02
CLIP1-203ENST00000361654 RSPO3Q9BXY4 272 aaPredicted RBP8.68□□□□□ -1.02
CLIP1-203ENST00000361654 FREM3P0C091 2139 aa8.68□□□□□ -1.02
CLIP1-203ENST00000361654 TRAV13-2A0A0B4J235 113 aa8.68□□□□□ -1.02
CLIP1-203ENST00000361654 RPL18AQ02543 176 aaKnown RBP8.68□□□□□ -1.02
CLIP1-203ENST00000361654 FAM104BQ5XKR9 115 aa8.68□□□□□ -1.02
CLIP1-203ENST00000361654 IGFL2Q6UWQ7 119 aa8.68□□□□□ -1.02
CLIP1-203ENST00000361654 TCF20Q9UGU0 1960 aaKnown RBP8.68□□□□□ -1.02
CLIP1-203ENST00000361654 NDUFS5O43920 106 aa8.67□□□□□ -1.02
CLIP1-203ENST00000361654 CLPSL2Q6UWE3 100 aa8.67□□□□□ -1.02
CLIP1-203ENST00000361654 GRNP28799 593 aaKnown RBP8.67□□□□□ -1.02
CLIP1-203ENST00000361654 ARTNQ5T4W7 220 aa8.67□□□□□ -1.02
CLIP1-203ENST00000361654 C5orf24Q7Z6I8 188 aa8.67□□□□□ -1.02
CLIP1-203ENST00000361654 CAMK2N2Q96S95 79 aa8.67□□□□□ -1.02
CLIP1-203ENST00000361654 DEFB136Q30KP8 78 aa8.67□□□□□ -1.02
CLIP1-203ENST00000361654 NDUFA12Q9UI09 145 aa8.67□□□□□ -1.02
CLIP1-203ENST00000361654 STPG4Q8N801 248 aa8.67□□□□□ -1.02
CLIP1-203ENST00000361654 OR11H6Q8NGC7 330 aa8.67□□□□□ -1.02
CLIP1-203ENST00000361654 SYS1-DBNDD2H3BUS1 97 aa8.67□□□□□ -1.02
CLIP1-203ENST00000361654 XCL1P47992 114 aa8.67□□□□□ -1.02
CLIP1-203ENST00000361654 OCIAD2Q56VL3 154 aa8.67□□□□□ -1.02
CLIP1-203ENST00000361654 DUX4L9Q6RFH8 374 aaPredicted RBP8.67□□□□□ -1.02
CLIP1-203ENST00000361654 Q6ZQT7 251 aa8.66□□□□□ -1.02
CLIP1-203ENST00000361654 ATP6V0E2Q8NHE4 81 aa8.66□□□□□ -1.02
CLIP1-203ENST00000361654 TMEM213A2RRL7 107 aa8.66□□□□□ -1.02
CLIP1-203ENST00000361654 CDPF1Q6NVV7 123 aa8.66□□□□□ -1.02
CLIP1-203ENST00000361654 SLURP1P55000 103 aa8.66□□□□□ -1.02
CLIP1-203ENST00000361654 LENEPQ9Y5L5 61 aa8.66□□□□□ -1.02
CLIP1-203ENST00000361654 FER1L5A0AVI2 2057 aa8.66□□□□□ -1.02
CLIP1-203ENST00000361654 Q6ZRM9 215 aa8.66□□□□□ -1.02
CLIP1-203ENST00000361654 A0A0G2JRQ6 117 aa8.65□□□□□ -1.02
CLIP1-203ENST00000361654 IGHV4-38-2P0DP08 117 aa8.65□□□□□ -1.02
CLIP1-203ENST00000361654 LYL1P12980 280 aa8.65□□□□□ -1.02
CLIP1-203ENST00000361654 GYPEP15421 78 aa8.65□□□□□ -1.02
CLIP1-203ENST00000361654 LRRK1Q38SD2 2015 aa8.65□□□□□ -1.02
CLIP1-203ENST00000361654 PTPRQQ9UMZ3 2332 aa8.65□□□□□ -1.02
CLIP1-203ENST00000361654 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.65□□□□□ -1.02
CLIP1-203ENST00000361654 MED12Q93074 2177 aa8.65□□□□□ -1.02
CLIP1-203ENST00000361654 K7EM74 188 aa8.65□□□□□ -1.02
CLIP1-203ENST00000361654 WT1-ASQ06250 92 aa8.65□□□□□ -1.03
CLIP1-203ENST00000361654 VOPP1Q96AW1 172 aa8.65□□□□□ -1.03
CLIP1-203ENST00000361654 MRPL36Q9P0J6 103 aaKnown RBP8.65□□□□□ -1.03
CLIP1-203ENST00000361654 MUC6Q6W4X9 2439 aa8.65□□□□□ -1.03
CLIP1-203ENST00000361654 FANCD2OSQ96PS1 177 aa8.64□□□□□ -1.03
CLIP1-203ENST00000361654 SIGMAR1Q99720 223 aa8.64□□□□□ -1.03
CLIP1-203ENST00000361654 IGLC1P0CG04 106 aa8.64□□□□□ -1.03
CLIP1-203ENST00000361654 C20orf78Q9BR46 151 aa8.64□□□□□ -1.03
CLIP1-203ENST00000361654 ZFAND6Q6FIF0 208 aa8.64□□□□□ -1.03
CLIP1-203ENST00000361654 LINC00479Q96M42 142 aa8.64□□□□□ -1.03
CLIP1-203ENST00000361654 IGKV1-6A0A0C4DH72 117 aa8.64□□□□□ -1.03
CLIP1-203ENST00000361654 hADV29S1A0JD25 119 aa8.64□□□□□ -1.03
CLIP1-203ENST00000361654 HAMPP81172 84 aa8.64□□□□□ -1.03
CLIP1-203ENST00000361654 ZNF581Q9P0T4 197 aa8.64□□□□□ -1.03
CLIP1-203ENST00000361654 LTBP1Q14766 1721 aa8.64□□□□□ -1.03
CLIP1-203ENST00000361654 XIRP1Q702N8 1843 aaKnown RBP8.64□□□□□ -1.03
CLIP1-203ENST00000361654 UBE2AP49459 152 aa8.64□□□□□ -1.03
CLIP1-203ENST00000361654 WDR86Q86TI4 376 aa8.64□□□□□ -1.03
CLIP1-203ENST00000361654 RNF183Q96D59 192 aa8.64□□□□□ -1.03
CLIP1-203ENST00000361654 SIGLEC8Q9NYZ4 499 aa8.64□□□□□ -1.03
CLIP1-203ENST00000361654 NOTCH2Q04721 2471 aa8.63□□□□□ -1.03
CLIP1-203ENST00000361654 TMEM89A2RUT3 159 aa8.63□□□□□ -1.03
CLIP1-203ENST00000361654 C15orf65H3BRN8 121 aa8.63□□□□□ -1.03
CLIP1-203ENST00000361654 NPSP0C0P6 89 aa8.63□□□□□ -1.03
CLIP1-203ENST00000361654 ADORA2A-AS1P86434 159 aa8.63□□□□□ -1.03
CLIP1-203ENST00000361654 PRR31Q5SQ13 230 aa8.63□□□□□ -1.03
CLIP1-203ENST00000361654 LRRC75A-AS1Q8N1F1 130 aa8.63□□□□□ -1.03
CLIP1-203ENST00000361654 RNF144BQ7Z419 303 aa8.63□□□□□ -1.03
CLIP1-203ENST00000361654 TPSG1Q9NRR2 321 aa8.63□□□□□ -1.03
CLIP1-203ENST00000361654 NDUFB1O75438 58 aa8.63□□□□□ -1.03
CLIP1-203ENST00000361654 C14orf177Q52M58 125 aa8.63□□□□□ -1.03
CLIP1-203ENST00000361654 APRG1Q8IVJ8 170 aa8.63□□□□□ -1.03
CLIP1-203ENST00000361654 C9JAW5 83 aa8.63□□□□□ -1.03
CLIP1-203ENST00000361654 IGHV3-30P01768 117 aa8.63□□□□□ -1.03
CLIP1-203ENST00000361654 IGHV3-33P01772 117 aa8.63□□□□□ -1.03
CLIP1-203ENST00000361654 IGHV3-30-3P0DP02 117 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms