RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 TMEM191AQ9H0A3 160 aa10.14□□□□□ -0.79
SQSTM1-201ENST00000360718 ST20Q9HBF5 79 aa10.14□□□□□ -0.79
SQSTM1-201ENST00000360718 CLEC5AQ9NY25 188 aa10.14□□□□□ -0.79
SQSTM1-201ENST00000360718 FN1P02751 2386 aaKnown RBP10.14□□□□□ -0.79
SQSTM1-201ENST00000360718 TMEM89A2RUT3 159 aa10.14□□□□□ -0.79
SQSTM1-201ENST00000360718 OR4C46A6NHA9 309 aa10.14□□□□□ -0.79
SQSTM1-201ENST00000360718 SYS1-DBNDD2H3BUS1 97 aa10.14□□□□□ -0.79
SQSTM1-201ENST00000360718 IGHG4P01861 327 aa10.14□□□□□ -0.79
SQSTM1-201ENST00000360718 S100A7P31151 101 aa10.14□□□□□ -0.79
SQSTM1-201ENST00000360718 MAJINQ3KP22 176 aa10.14□□□□□ -0.79
SQSTM1-201ENST00000360718 C10orf99Q6UWK7 81 aa10.14□□□□□ -0.79
SQSTM1-201ENST00000360718 STPG4Q8N801 248 aa10.14□□□□□ -0.79
SQSTM1-201ENST00000360718 ZNF491Q8N8L2 437 aa10.14□□□□□ -0.79
SQSTM1-201ENST00000360718 MAP1LC3CQ9BXW4 147 aa10.14□□□□□ -0.79
SQSTM1-201ENST00000360718 HSPB8Q9UJY1 196 aa10.14□□□□□ -0.79
SQSTM1-201ENST00000360718 PSG8Q9UQ74 426 aa10.14□□□□□ -0.79
SQSTM1-201ENST00000360718 HSBP1L1C9JCN9 74 aa10.13□□□□□ -0.79
SQSTM1-201ENST00000360718 RAB9AP51151 201 aa10.13□□□□□ -0.79
SQSTM1-201ENST00000360718 PSG3Q16557 428 aa10.13□□□□□ -0.79
SQSTM1-201ENST00000360718 LCNL1Q6ZST4 164 aa10.13□□□□□ -0.79
SQSTM1-201ENST00000360718 CCDC140Q96MF4 163 aa10.13□□□□□ -0.79
SQSTM1-201ENST00000360718 F8P00451 2351 aa10.13□□□□□ -0.79
SQSTM1-201ENST00000360718 SERTM2A0A1B0GWG4 89 aa10.13□□□□□ -0.79
SQSTM1-201ENST00000360718 WI2-2373I1.2A0A1W2PRP0 233 aa10.13□□□□□ -0.79
SQSTM1-201ENST00000360718 APOHP02749 345 aaPredicted RBP10.13□□□□□ -0.79
SQSTM1-201ENST00000360718 PET117Q6UWS5 81 aa10.13□□□□□ -0.79
SQSTM1-201ENST00000360718 SIGLEC15Q6ZMC9 328 aa10.13□□□□□ -0.79
SQSTM1-201ENST00000360718 GATD1Q8NB37 220 aa10.13□□□□□ -0.79
SQSTM1-201ENST00000360718 KLK15Q9H2R5 256 aa10.13□□□□□ -0.79
SQSTM1-201ENST00000360718 AAMDCQ9H7C9 122 aa10.13□□□□□ -0.79
SQSTM1-201ENST00000360718 CT45A10P0DMU9 189 aa10.12□□□□□ -0.79
SQSTM1-201ENST00000360718 PDE6HQ13956 83 aa10.12□□□□□ -0.79
SQSTM1-201ENST00000360718 Q8N2B8 174 aa10.12□□□□□ -0.79
SQSTM1-201ENST00000360718 ZC2HC1AQ96GY0 325 aa10.12□□□□□ -0.79
SQSTM1-201ENST00000360718 CSN1S1P47710 185 aa10.12□□□□□ -0.79
SQSTM1-201ENST00000360718 HINT1P49773 126 aaPredicted RBP10.12□□□□□ -0.79
SQSTM1-201ENST00000360718 ZNF414Q96IQ9 312 aa10.12□□□□□ -0.79
SQSTM1-201ENST00000360718 INAFM1C9JVW0 142 aa10.11□□□□□ -0.79
SQSTM1-201ENST00000360718 M0QZ24 198 aa10.11□□□□□ -0.79
SQSTM1-201ENST00000360718 TCF21O43680 179 aa10.11□□□□□ -0.79
SQSTM1-201ENST00000360718 PSMB8P28062 276 aa10.11□□□□□ -0.79
SQSTM1-201ENST00000360718 ARL3P36405 182 aa10.1□□□□□ -0.79
SQSTM1-201ENST00000360718 PSG9Q00887 426 aa10.1□□□□□ -0.79
SQSTM1-201ENST00000360718 C17orf77Q96MU5 243 aa10.1□□□□□ -0.79
SQSTM1-201ENST00000360718 JMJD8Q96S16 334 aa10.1□□□□□ -0.79
SQSTM1-201ENST00000360718 RABAC1Q9UI14 185 aa10.1□□□□□ -0.79
SQSTM1-201ENST00000360718 IGHV3-35A0A0C4DH35 117 aa10.1□□□□□ -0.79
SQSTM1-201ENST00000360718 MRPS12O15235 138 aaKnown RBP10.1□□□□□ -0.79
SQSTM1-201ENST00000360718 IGHV3-11P01762 117 aa10.1□□□□□ -0.79
SQSTM1-201ENST00000360718 ELANEP08246 267 aa10.1□□□□□ -0.79
SQSTM1-201ENST00000360718 FOXE3Q13461 319 aa10.1□□□□□ -0.79
SQSTM1-201ENST00000360718 OR4X2Q8NGF9 303 aa10.1□□□□□ -0.79
SQSTM1-201ENST00000360718 FBLL1A6NHQ2 334 aaKnown RBP10.09□□□□□ -0.79
SQSTM1-201ENST00000360718 ARMS2P0C7Q2 107 aa10.09□□□□□ -0.79
SQSTM1-201ENST00000360718 PTTG1IPP53801 180 aa10.09□□□□□ -0.79
SQSTM1-201ENST00000360718 PRR31Q5SQ13 230 aa10.09□□□□□ -0.79
SQSTM1-201ENST00000360718 SPATA12Q7Z6I5 190 aa10.09□□□□□ -0.79
SQSTM1-201ENST00000360718 ZNF738Q8NE65 137 aa10.09□□□□□ -0.79
SQSTM1-201ENST00000360718 MS4A6AQ9H2W1 248 aa10.09□□□□□ -0.79
SQSTM1-201ENST00000360718 RNASE1P07998 156 aaKnown RBP10.09□□□□□ -0.79
SQSTM1-201ENST00000360718 FA2HQ7L5A8 372 aa10.09□□□□□ -0.79
SQSTM1-201ENST00000360718 AP5S1Q9NUS5 200 aa10.09□□□□□ -0.79
SQSTM1-201ENST00000360718 SETD2Q9BYW2 2564 aaPredicted RBP10.08□□□□□ -0.8
SQSTM1-201ENST00000360718 ZNF785A8K8V0 405 aa10.08□□□□□ -0.8
SQSTM1-201ENST00000360718 HILS1P60008 231 aa10.08□□□□□ -0.8
SQSTM1-201ENST00000360718 UBE2V1Q13404 147 aa10.08□□□□□ -0.8
SQSTM1-201ENST00000360718 SAPCD1Q5SSQ6 148 aa10.08□□□□□ -0.8
SQSTM1-201ENST00000360718 SLC25A34Q6PIV7 304 aa10.08□□□□□ -0.8
SQSTM1-201ENST00000360718 PRSS3P2Q8NHM4 247 aa10.08□□□□□ -0.8
SQSTM1-201ENST00000360718 ZNF493Q6ZR52 646 aa10.08□□□□□ -0.8
SQSTM1-201ENST00000360718 Q6ZSV7 163 aa10.08□□□□□ -0.8
SQSTM1-201ENST00000360718 LINC00173Q6ZV60 143 aa10.08□□□□□ -0.8
SQSTM1-201ENST00000360718 COX11Q9Y6N1 276 aa10.08□□□□□ -0.8
SQSTM1-201ENST00000360718 TMEM189A5PLL7 270 aa10.07□□□□□ -0.8
SQSTM1-201ENST00000360718 K7EP13 123 aa10.07□□□□□ -0.8
SQSTM1-201ENST00000360718 TRBV12-3P01733 135 aa10.07□□□□□ -0.8
SQSTM1-201ENST00000360718 CSN3P07498 182 aa10.07□□□□□ -0.8
SQSTM1-201ENST00000360718 RPL7P18124 248 aaKnown RBP10.07□□□□□ -0.8
SQSTM1-201ENST00000360718 CRIP1P50238 77 aa10.07□□□□□ -0.8
SQSTM1-201ENST00000360718 ZNF138P52744 262 aa10.07□□□□□ -0.8
SQSTM1-201ENST00000360718 OR10AG1Q8NH19 301 aa10.07□□□□□ -0.8
SQSTM1-201ENST00000360718 ZFAND3Q9H8U3 227 aa10.07□□□□□ -0.8
SQSTM1-201ENST00000360718 PEF1Q9UBV8 284 aaKnown RBP10.07□□□□□ -0.8
SQSTM1-201ENST00000360718 METTL26Q96S19 204 aa10.07□□□□□ -0.8
SQSTM1-201ENST00000360718 TPPP3Q9BW30 176 aa10.07□□□□□ -0.8
SQSTM1-201ENST00000360718 IGHV3OR16-8A0A075B7F1 116 aa10.06□□□□□ -0.8
SQSTM1-201ENST00000360718 M0R3E3 92 aa10.06□□□□□ -0.8
SQSTM1-201ENST00000360718 NDUFA4O00483 81 aa10.06□□□□□ -0.8
SQSTM1-201ENST00000360718 CCL25O15444 150 aa10.06□□□□□ -0.8
SQSTM1-201ENST00000360718 RPS20P60866 119 aaKnown RBP10.06□□□□□ -0.8
SQSTM1-201ENST00000360718 SVIPQ8NHG7 77 aa10.06□□□□□ -0.8
SQSTM1-201ENST00000360718 hDV102S1A0JD36 115 aa10.05□□□□□ -0.8
SQSTM1-201ENST00000360718 LINC01545Q5VT33 79 aa10.05□□□□□ -0.8
SQSTM1-201ENST00000360718 RNF152Q8N8N0 203 aa10.05□□□□□ -0.8
SQSTM1-201ENST00000360718 UBE2E2Q96LR5 201 aa10.05□□□□□ -0.8
SQSTM1-201ENST00000360718 BMI1P35226 326 aa10.05□□□□□ -0.8
SQSTM1-201ENST00000360718 SRSF2Q01130 221 aaKnown RBP10.05□□□□□ -0.8
SQSTM1-201ENST00000360718 C12orf54Q6X4T0 127 aa10.05□□□□□ -0.8
SQSTM1-201ENST00000360718 COX8CQ7Z4L0 72 aa10.05□□□□□ -0.8
SQSTM1-201ENST00000360718 PMCHL2Q9BQD1 86 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms