RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 IBA57-AS1B1ANH7 110 aa9.25□□□□□ -0.93
VPS29-201ENST00000360579 NDUFB4O95168 129 aa9.25□□□□□ -0.93
VPS29-201ENST00000360579 SFTA3P0C7M3 94 aa9.25□□□□□ -0.93
VPS29-201ENST00000360579 TMBIM6P55061 237 aa9.25□□□□□ -0.93
VPS29-201ENST00000360579 MIC13Q5XKP0 118 aa9.25□□□□□ -0.93
VPS29-201ENST00000360579 SPXQ9BT56 116 aa9.25□□□□□ -0.93
VPS29-201ENST00000360579 C20orf85Q9H1P6 137 aa9.25□□□□□ -0.93
VPS29-201ENST00000360579 FAT3Q8TDW7 4589 aa9.25□□□□□ -0.93
VPS29-201ENST00000360579 L7N2F9 121 aa9.24□□□□□ -0.93
VPS29-201ENST00000360579 RPL29P47914 159 aaKnown RBP9.24□□□□□ -0.93
VPS29-201ENST00000360579 PPT1P50897 306 aa9.24□□□□□ -0.93
VPS29-201ENST00000360579 VAMP2P63027 116 aa9.24□□□□□ -0.93
VPS29-201ENST00000360579 PRR9Q5T870 116 aa9.24□□□□□ -0.93
VPS29-201ENST00000360579 Q6ZSA8 131 aa9.24□□□□□ -0.93
VPS29-201ENST00000360579 EXOC3-AS1Q8N2X6 119 aa9.24□□□□□ -0.93
VPS29-201ENST00000360579 SLC25A31Q9H0C2 315 aa9.24□□□□□ -0.93
VPS29-201ENST00000360579 UQCC1Q9NVA1 299 aa9.24□□□□□ -0.93
VPS29-201ENST00000360579 GSKIPQ9P0R6 139 aa9.24□□□□□ -0.93
VPS29-201ENST00000360579 ZNF492Q9P255 531 aa9.24□□□□□ -0.93
VPS29-201ENST00000360579 TRAV8-6A0A0B4J262 113 aa9.23□□□□□ -0.93
VPS29-201ENST00000360579 TRAV4A0A0B4J268 109 aa9.23□□□□□ -0.93
VPS29-201ENST00000360579 ZNF138P52744 262 aa9.23□□□□□ -0.93
VPS29-201ENST00000360579 TDRG1Q3Y452 100 aa9.23□□□□□ -0.93
VPS29-201ENST00000360579 BLNKQ8WV28 456 aa9.23□□□□□ -0.93
VPS29-201ENST00000360579 TM2D2Q9BX73 214 aa9.23□□□□□ -0.93
VPS29-201ENST00000360579 Q9HAA7 133 aa9.23□□□□□ -0.93
VPS29-201ENST00000360579 SLC39A9Q9NUM3 307 aa9.23□□□□□ -0.93
VPS29-201ENST00000360579 PLA2G2DQ9UNK4 145 aa9.23□□□□□ -0.93
VPS29-201ENST00000360579 WDR83OSQ9Y284 106 aa9.23□□□□□ -0.93
VPS29-201ENST00000360579 TRGV11A0A075B6L2 103 aa9.22□□□□□ -0.93
VPS29-201ENST00000360579 IGKV2-40A0A087WW87 121 aaPredicted RBP9.22□□□□□ -0.93
VPS29-201ENST00000360579 NOL3O60936 208 aaKnown RBP9.22□□□□□ -0.93
VPS29-201ENST00000360579 NDUFB6O95139 128 aa9.22□□□□□ -0.93
VPS29-201ENST00000360579 OXTP01178 125 aa9.22□□□□□ -0.93
VPS29-201ENST00000360579 IGKV2D-40P01614 121 aaPredicted RBP9.22□□□□□ -0.93
VPS29-201ENST00000360579 MBPP02686 304 aaPredicted RBP9.22□□□□□ -0.93
VPS29-201ENST00000360579 NHLRC2Q8NBF2 726 aa9.22□□□□□ -0.93
VPS29-201ENST00000360579 OR4C5Q8NGB2 326 aa9.22□□□□□ -0.93
VPS29-201ENST00000360579 GPN1Q9HCN4 374 aaPredicted RBP9.22□□□□□ -0.93
VPS29-201ENST00000360579 V9GYH0 126 aa9.22□□□□□ -0.93
VPS29-201ENST00000360579 NAP1L6A6NFF2 107 aa9.21□□□□□ -0.94
VPS29-201ENST00000360579 PYYP10082 97 aa9.21□□□□□ -0.94
VPS29-201ENST00000360579 BCAP31P51572 246 aa9.21□□□□□ -0.94
VPS29-201ENST00000360579 CAV2P51636 162 aa9.21□□□□□ -0.94
VPS29-201ENST00000360579 ZNF266Q14584 549 aa9.21□□□□□ -0.94
VPS29-201ENST00000360579 LAGE3Q14657 143 aa9.21□□□□□ -0.94
VPS29-201ENST00000360579 MUC21Q5SSG8 566 aa9.21□□□□□ -0.94
VPS29-201ENST00000360579 FAM122CQ6P4D5 195 aa9.21□□□□□ -0.94
VPS29-201ENST00000360579 Q6ZQT7 251 aa9.21□□□□□ -0.94
VPS29-201ENST00000360579 CHAC2Q8WUX2 184 aa9.21□□□□□ -0.94
VPS29-201ENST00000360579 GHRHP01286 108 aa9.2□□□□□ -0.94
VPS29-201ENST00000360579 PFN1P07737 140 aaKnown RBP9.2□□□□□ -0.94
VPS29-201ENST00000360579 BAXQ07812 192 aa9.2□□□□□ -0.94
VPS29-201ENST00000360579 TMEM183BQ1AE95 376 aa9.2□□□□□ -0.94
VPS29-201ENST00000360579 VWC2Q2TAL6 325 aa9.2□□□□□ -0.94
VPS29-201ENST00000360579 OR10J3Q5JRS4 329 aa9.2□□□□□ -0.94
VPS29-201ENST00000360579 FAM159AQ6UWV7 190 aa9.2□□□□□ -0.94
VPS29-201ENST00000360579 TMEM183AQ8IXX5 376 aa9.2□□□□□ -0.94
VPS29-201ENST00000360579 UBE2L5PA0A1B0GUS4 154 aa9.19□□□□□ -0.94
VPS29-201ENST00000360579 CST7O76096 145 aa9.19□□□□□ -0.94
VPS29-201ENST00000360579 S100A11P31949 105 aa9.19□□□□□ -0.94
VPS29-201ENST00000360579 S100A5P33763 92 aa9.19□□□□□ -0.94
VPS29-201ENST00000360579 INPP1P49441 399 aa9.19□□□□□ -0.94
VPS29-201ENST00000360579 ZNF846Q147U1 533 aa9.19□□□□□ -0.94
VPS29-201ENST00000360579 Q8TAT8 98 aa9.19□□□□□ -0.94
VPS29-201ENST00000360579 MITD1Q8WV92 249 aa9.19□□□□□ -0.94
VPS29-201ENST00000360579 FLVCR2Q9UPI3 526 aa9.19□□□□□ -0.94
VPS29-201ENST00000360579 LOC100131303A0A0U1RQF7 123 aa9.18□□□□□ -0.94
VPS29-201ENST00000360579 RBAKDNA6NC62 111 aa9.18□□□□□ -0.94
VPS29-201ENST00000360579 H3BMQ9 156 aa9.18□□□□□ -0.94
VPS29-201ENST00000360579 M0R2P5 195 aa9.18□□□□□ -0.94
VPS29-201ENST00000360579 NBEAP1P0C6P0 100 aa9.18□□□□□ -0.94
VPS29-201ENST00000360579 PVALBP20472 110 aaPredicted RBP9.18□□□□□ -0.94
VPS29-201ENST00000360579 CSN1S1P47710 185 aa9.18□□□□□ -0.94
VPS29-201ENST00000360579 HBG1P69891 147 aa9.18□□□□□ -0.94
VPS29-201ENST00000360579 HBG2P69892 147 aa9.18□□□□□ -0.94
VPS29-201ENST00000360579 ASAH1Q13510 395 aa9.18□□□□□ -0.94
VPS29-201ENST00000360579 BAK1Q16611 211 aa9.18□□□□□ -0.94
VPS29-201ENST00000360579 Q6AWC8 147 aa9.18□□□□□ -0.94
VPS29-201ENST00000360579 LENEPQ9Y5L5 61 aa9.18□□□□□ -0.94
VPS29-201ENST00000360579 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.17□□□□□ -0.94
VPS29-201ENST00000360579 IGHV3-30P01768 117 aa9.17□□□□□ -0.94
VPS29-201ENST00000360579 IGHV3-33P01772 117 aa9.17□□□□□ -0.94
VPS29-201ENST00000360579 IGHV3-30-3P0DP02 117 aa9.17□□□□□ -0.94
VPS29-201ENST00000360579 IGHV3-30-5P0DP03 117 aa9.17□□□□□ -0.94
VPS29-201ENST00000360579 GATA1P15976 413 aaPredicted RBP9.17□□□□□ -0.94
VPS29-201ENST00000360579 SULT1A1P50225 295 aa9.17□□□□□ -0.94
VPS29-201ENST00000360579 LELP1Q5T871 98 aa9.17□□□□□ -0.94
VPS29-201ENST00000360579 STX12Q86Y82 276 aa9.17□□□□□ -0.94
VPS29-201ENST00000360579 SLC25A2Q9BXI2 301 aa9.17□□□□□ -0.94
VPS29-201ENST00000360579 KRTAP9-2Q9BYQ4 174 aa9.17□□□□□ -0.94
VPS29-201ENST00000360579 LSM5Q9Y4Y9 91 aaKnown RBP9.17□□□□□ -0.94
VPS29-201ENST00000360579 TRAV8-3A0A0A6YYJ7 113 aa9.16□□□□□ -0.94
VPS29-201ENST00000360579 FAM24AA6NFZ4 105 aa9.16□□□□□ -0.94
VPS29-201ENST00000360579 FGF7P21781 194 aa9.16□□□□□ -0.94
VPS29-201ENST00000360579 ATP6V1FQ16864 119 aa9.16□□□□□ -0.94
VPS29-201ENST00000360579 CNPY1Q3B7I2 92 aa9.16□□□□□ -0.94
VPS29-201ENST00000360579 TRIQKQ629K1 86 aa9.16□□□□□ -0.94
VPS29-201ENST00000360579 SCXQ7RTU7 201 aa9.16□□□□□ -0.94
VPS29-201ENST00000360579 PRADC1Q9BSG0 188 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms