RNA–Protein interactions for RNA: ENST00000359454.10

CCDC196-201, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,083 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-201ENST00000359454 CABLES2Q9BTV7 478 aa4.72□□□□□ -1.65
CCDC196-201ENST00000359454 C1QTNF4Q9BXJ3 329 aa4.72□□□□□ -1.65
CCDC196-201ENST00000359454 KRTAP9-3Q9BYQ3 159 aa4.72□□□□□ -1.65
CCDC196-201ENST00000359454 OR1A1Q9P1Q5 309 aa4.72□□□□□ -1.65
CCDC196-201ENST00000359454 FBXL17Q9UF56 701 aa4.72□□□□□ -1.65
CCDC196-201ENST00000359454 TP53TG1Q9Y2A0 90 aa4.72□□□□□ -1.65
CCDC196-201ENST00000359454 NSG2Q9Y328 171 aa4.72□□□□□ -1.65
CCDC196-201ENST00000359454 BORCS7-ASMTA0A0B4J1R7 106 aa4.71□□□□□ -1.66
CCDC196-201ENST00000359454 TRBV9A0A0B4J1U6 114 aa4.71□□□□□ -1.66
CCDC196-201ENST00000359454 C3orf85A0A1B0GTC6 90 aa4.71□□□□□ -1.66
CCDC196-201ENST00000359454 MAP1LC3B2A6NCE7 125 aa4.71□□□□□ -1.66
CCDC196-201ENST00000359454 GAGE12JA6NER3 117 aa4.71□□□□□ -1.66
CCDC196-201ENST00000359454 ZNF727A8MUV8 499 aa4.71□□□□□ -1.66
CCDC196-201ENST00000359454 K7EP34 96 aa4.71□□□□□ -1.66
CCDC196-201ENST00000359454 SPRY2O43597 315 aa4.71□□□□□ -1.66
CCDC196-201ENST00000359454 DEDDO75618 318 aa4.71□□□□□ -1.66
CCDC196-201ENST00000359454 GAGE7O76087 117 aa4.71□□□□□ -1.66
CCDC196-201ENST00000359454 GAGE12FP0CL80 117 aa4.71□□□□□ -1.66
CCDC196-201ENST00000359454 GAGE12GP0CL81 117 aa4.71□□□□□ -1.66
CCDC196-201ENST00000359454 GAGE12IP0CL82 117 aa4.71□□□□□ -1.66
CCDC196-201ENST00000359454 C8orf88P0DMB2 117 aa4.71□□□□□ -1.66
CCDC196-201ENST00000359454 APELAP0DMC3 54 aa4.71□□□□□ -1.66
CCDC196-201ENST00000359454 CBLN1P23435 193 aa4.71□□□□□ -1.66
CCDC196-201ENST00000359454 FAM3BP58499 235 aaPredicted RBP4.71□□□□□ -1.66
CCDC196-201ENST00000359454 EWSR1Q01844 656 aaKnown RBP eCLIP4.71□□□□□ -1.66
CCDC196-201ENST00000359454 GAGE4Q13068 117 aa4.71□□□□□ -1.66
CCDC196-201ENST00000359454 IL15RAQ13261 267 aa4.71□□□□□ -1.66
CCDC196-201ENST00000359454 TMEM187Q14656 261 aa4.71□□□□□ -1.66
CCDC196-201ENST00000359454 RTL8BQ17RB0 113 aa4.71□□□□□ -1.66
CCDC196-201ENST00000359454 SPATA45Q537H7 98 aa4.71□□□□□ -1.66
CCDC196-201ENST00000359454 ACTL10Q5JWF8 245 aa4.71□□□□□ -1.66
CCDC196-201ENST00000359454 MRPL54Q6P161 138 aaKnown RBP4.71□□□□□ -1.66
CCDC196-201ENST00000359454 Q6ZRG5 221 aa4.71□□□□□ -1.66
CCDC196-201ENST00000359454 Q6ZWC4 215 aa4.71□□□□□ -1.66
CCDC196-201ENST00000359454 TTC9CQ8N5M4 171 aa4.71□□□□□ -1.66
CCDC196-201ENST00000359454 ZNF709Q8N972 641 aa4.71□□□□□ -1.66
CCDC196-201ENST00000359454 TEX45Q8NA69 505 aa4.71□□□□□ -1.66
CCDC196-201ENST00000359454 SEC22AQ96IW7 307 aa4.71□□□□□ -1.66
CCDC196-201ENST00000359454 ANAPC13Q9BS18 74 aa4.71□□□□□ -1.66
CCDC196-201ENST00000359454 MAP1LC3BQ9GZQ8 125 aa4.71□□□□□ -1.66
CCDC196-201ENST00000359454 TMEM222Q9H0R3 208 aa4.71□□□□□ -1.66
CCDC196-201ENST00000359454 NPVFQ9HCQ7 196 aa4.71□□□□□ -1.66
CCDC196-201ENST00000359454 CYSLTR1Q9Y271 337 aa4.71□□□□□ -1.66
CCDC196-201ENST00000359454 OR2W1Q9Y3N9 320 aa4.71□□□□□ -1.66
CCDC196-201ENST00000359454 OR2T8A6NH00 312 aa4.7□□□□□ -1.66
CCDC196-201ENST00000359454 SRRM4A7MD48 611 aaKnown RBP4.7□□□□□ -1.66
CCDC196-201ENST00000359454 FABP5P3A8MUU1 101 aa4.7□□□□□ -1.66
CCDC196-201ENST00000359454 HMGB3O15347 200 aaKnown RBP4.7□□□□□ -1.66
CCDC196-201ENST00000359454 PRH1P02810 166 aa4.7□□□□□ -1.66
CCDC196-201ENST00000359454 SCTP09683 121 aa4.7□□□□□ -1.66
CCDC196-201ENST00000359454 EDN2P20800 178 aa4.7□□□□□ -1.66
CCDC196-201ENST00000359454 P2RY1P47900 373 aa4.7□□□□□ -1.66
CCDC196-201ENST00000359454 APOC4P55056 127 aa4.7□□□□□ -1.66
CCDC196-201ENST00000359454 FXYD4P59646 89 aa4.7□□□□□ -1.66
CCDC196-201ENST00000359454 PNRC1Q12796 327 aaPredicted RBP4.7□□□□□ -1.66
CCDC196-201ENST00000359454 CATR1Q13166 79 aa4.7□□□□□ -1.66
CCDC196-201ENST00000359454 FHL2Q14192 279 aa4.7□□□□□ -1.66
CCDC196-201ENST00000359454 MRGPRG-AS1Q2M3A8 158 aa4.7□□□□□ -1.66
CCDC196-201ENST00000359454 VMA21Q3ZAQ7 101 aa4.7□□□□□ -1.66
CCDC196-201ENST00000359454 GPHB5Q86YW7 130 aa4.7□□□□□ -1.66
CCDC196-201ENST00000359454 TMEM61Q8N0U2 210 aa4.7□□□□□ -1.66
CCDC196-201ENST00000359454 OR13C6PQ8NH95 151 aa4.7□□□□□ -1.66
CCDC196-201ENST00000359454 SRSF12Q8WXF0 261 aaKnown RBP4.7□□□□□ -1.66
CCDC196-201ENST00000359454 LSM10Q969L4 123 aaKnown RBP4.7□□□□□ -1.66
CCDC196-201ENST00000359454 HDHD3Q9BSH5 251 aaPredicted RBP4.7□□□□□ -1.66
CCDC196-201ENST00000359454 RNF126Q9BV68 326 aa4.7□□□□□ -1.66
CCDC196-201ENST00000359454 SMIM3Q9BZL3 60 aa4.7□□□□□ -1.66
CCDC196-201ENST00000359454 SPANXCQ9NY87 97 aa4.7□□□□□ -1.66
CCDC196-201ENST00000359454 IGKV1D-8A0A087WSZ0 117 aa4.69□□□□□ -1.66
CCDC196-201ENST00000359454 IGKV1-6A0A0C4DH72 117 aa4.69□□□□□ -1.66
CCDC196-201ENST00000359454 NPIPB5A8MRT5 1133 aa4.69□□□□□ -1.66
CCDC196-201ENST00000359454 FAM90A26D6RGX4 464 aa4.69□□□□□ -1.66
CCDC196-201ENST00000359454 OR2J3O76001 311 aa4.69□□□□□ -1.66
CCDC196-201ENST00000359454 ACTL6BO94805 426 aa4.69□□□□□ -1.66
CCDC196-201ENST00000359454 PMCHP20382 165 aa4.69□□□□□ -1.66
CCDC196-201ENST00000359454 RPL12P30050 165 aaKnown RBP4.69□□□□□ -1.66
CCDC196-201ENST00000359454 FCGR2BP31994 310 aaPredicted RBP4.69□□□□□ -1.66
CCDC196-201ENST00000359454 CNN1P51911 297 aaKnown RBP4.69□□□□□ -1.66
CCDC196-201ENST00000359454 FOXI1Q12951 378 aa4.69□□□□□ -1.66
CCDC196-201ENST00000359454 MRPL23Q16540 153 aaKnown RBP4.69□□□□□ -1.66
CCDC196-201ENST00000359454 C15orf32Q32M92 178 aa4.69□□□□□ -1.66
CCDC196-201ENST00000359454 LRRC37A5PQ49AS3 106 aa4.69□□□□□ -1.66
CCDC196-201ENST00000359454 FAM106AQ4KMX7 169 aa4.69□□□□□ -1.66
CCDC196-201ENST00000359454 SIGLEC15Q6ZMC9 328 aa4.69□□□□□ -1.66
CCDC196-201ENST00000359454 ZNF66Q6ZN08 573 aa4.69□□□□□ -1.66
CCDC196-201ENST00000359454 FAM219AQ8IW50 185 aa4.69□□□□□ -1.66
CCDC196-201ENST00000359454 PHLDA1Q8WV24 401 aaPredicted RBP4.69□□□□□ -1.66
CCDC196-201ENST00000359454 ADTRPQ96IZ2 230 aa4.69□□□□□ -1.66
CCDC196-201ENST00000359454 RAB40CQ96S21 281 aa4.69□□□□□ -1.66
CCDC196-201ENST00000359454 WDR61Q9GZS3 305 aaKnown RBP4.69□□□□□ -1.66
CCDC196-201ENST00000359454 EIF5A2Q9GZV4 153 aaKnown RBP4.69□□□□□ -1.66
CCDC196-201ENST00000359454 OR2D2Q9H210 308 aa4.69□□□□□ -1.66
CCDC196-201ENST00000359454 ZNF257Q9Y2Q1 563 aa4.69□□□□□ -1.66
CCDC196-201ENST00000359454 PLECQ15149 4684 aaKnown RBP4.69□□□□□ -1.66
CCDC196-201ENST00000359454 HERC2O95714 4834 aa4.69□□□□□ -1.66
CCDC196-201ENST00000359454 TRAV8-6A0A0B4J262 113 aa4.68□□□□□ -1.66
CCDC196-201ENST00000359454 A6NDN8 102 aa4.68□□□□□ -1.66
CCDC196-201ENST00000359454 NXPH3O95157 252 aa4.68□□□□□ -1.66
CCDC196-201ENST00000359454 REG1AP05451 166 aa4.68□□□□□ -1.66
CCDC196-201ENST00000359454 SEC11BP0C7V7 166 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms