RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 Q6ZVH6 145 aa10.88□□□□□ -0.67
VCP-201ENST00000358901 MRPL35Q9NZE8 188 aaKnown RBP10.88□□□□□ -0.67
VCP-201ENST00000358901 DEFB131AP59861 70 aa10.88□□□□□ -0.67
VCP-201ENST00000358901 NCOR2Q9Y618 2525 aa10.88□□□□□ -0.67
VCP-201ENST00000358901 MALP21145 153 aa10.88□□□□□ -0.67
VCP-201ENST00000358901 HLA-DMBP28068 263 aa10.88□□□□□ -0.67
VCP-201ENST00000358901 DSCR9P59020 149 aa10.88□□□□□ -0.67
VCP-201ENST00000358901 SPINK13Q1W4C9 94 aa10.88□□□□□ -0.67
VCP-201ENST00000358901 ABCA2Q9BZC7 2435 aa10.87□□□□□ -0.67
VCP-201ENST00000358901 SLC25A16P16260 332 aa10.87□□□□□ -0.67
VCP-201ENST00000358901 ETDBQ3ZM63 59 aa10.87□□□□□ -0.67
VCP-201ENST00000358901 FAM120AOSQ5T036 256 aa10.87□□□□□ -0.67
VCP-201ENST00000358901 UNQ6494/PRO21346Q6UXR6 183 aa10.87□□□□□ -0.67
VCP-201ENST00000358901 DTX2Q86UW9 622 aa10.87□□□□□ -0.67
VCP-201ENST00000358901 TRAV13-1A0A0B4J241 112 aa10.87□□□□□ -0.67
VCP-201ENST00000358901 LTAP01374 205 aa10.87□□□□□ -0.67
VCP-201ENST00000358901 NUP210Q8TEM1 1887 aaPredicted RBP10.87□□□□□ -0.67
VCP-201ENST00000358901 KIR2DL5BA0A0G2JN68 375 aa10.87□□□□□ -0.67
VCP-201ENST00000358901 KIR2DL5BA0A0G2JPC4 375 aa10.87□□□□□ -0.67
VCP-201ENST00000358901 KIR2DL5AQ8N109 375 aa10.87□□□□□ -0.67
VCP-201ENST00000358901 IGF2RP11717 2491 aa10.86□□□□□ -0.67
VCP-201ENST00000358901 LY6G5BQ8NDX9 201 aa10.86□□□□□ -0.67
VCP-201ENST00000358901 DKK4Q9UBT3 224 aa10.86□□□□□ -0.67
VCP-201ENST00000358901 PCNTO95613 3336 aa10.86□□□□□ -0.67
VCP-201ENST00000358901 BVES-AS1Q5T3Y7 98 aa10.86□□□□□ -0.67
VCP-201ENST00000358901 TIMM21Q9BVV7 248 aa10.86□□□□□ -0.67
VCP-201ENST00000358901 C9orf118A6NHY6 69 aa10.86□□□□□ -0.67
VCP-201ENST00000358901 SAP30O75446 220 aa10.86□□□□□ -0.67
VCP-201ENST00000358901 IGFBPL1Q8WX77 278 aa10.86□□□□□ -0.67
VCP-201ENST00000358901 LHBP01229 141 aa10.86□□□□□ -0.67
VCP-201ENST00000358901 ANXA2RQ3ZCQ2 193 aa10.86□□□□□ -0.67
VCP-201ENST00000358901 C2orf82Q6UX34 121 aa10.86□□□□□ -0.67
VCP-201ENST00000358901 NEGR1Q7Z3B1 354 aa10.86□□□□□ -0.67
VCP-201ENST00000358901 SDHAF1A6NFY7 115 aa10.85□□□□□ -0.67
VCP-201ENST00000358901 C9JAW5 83 aa10.85□□□□□ -0.67
VCP-201ENST00000358901 ZNF747Q9BV97 191 aa10.85□□□□□ -0.67
VCP-201ENST00000358901 PATE2Q6UY27 113 aa10.85□□□□□ -0.67
VCP-201ENST00000358901 TMEM86BQ8N661 226 aa10.85□□□□□ -0.67
VCP-201ENST00000358901 KLHL30-AS1Q8NEE0 82 aa10.85□□□□□ -0.67
VCP-201ENST00000358901 ZNF625Q96I27 306 aaPredicted RBP10.85□□□□□ -0.67
VCP-201ENST00000358901 KIF26AQ9ULI4 1882 aaPredicted RBP10.85□□□□□ -0.67
VCP-201ENST00000358901 MSRB2Q9Y3D2 182 aa10.85□□□□□ -0.67
VCP-201ENST00000358901 IGHV1-69DA0A0B4J2H0 117 aa10.85□□□□□ -0.67
VCP-201ENST00000358901 NDUFS8O00217 210 aa10.85□□□□□ -0.67
VCP-201ENST00000358901 PAX4O43316 350 aa10.85□□□□□ -0.67
VCP-201ENST00000358901 IGHV1-69P01742 117 aa10.85□□□□□ -0.67
VCP-201ENST00000358901 DKK2Q9UBU2 259 aa10.85□□□□□ -0.67
VCP-201ENST00000358901 IGHV2-70DA0A0C4DH43 119 aa10.84□□□□□ -0.67
VCP-201ENST00000358901 NDUFS7O75251 213 aa10.84□□□□□ -0.67
VCP-201ENST00000358901 MSMBP08118 114 aa10.84□□□□□ -0.67
VCP-201ENST00000358901 NSUN5P1Q3KNT7 163 aa10.84□□□□□ -0.67
VCP-201ENST00000358901 IGLV2-14P01704 120 aa10.84□□□□□ -0.67
VCP-201ENST00000358901 PRIMA1Q86XR5 153 aa10.84□□□□□ -0.67
VCP-201ENST00000358901 MAPK1IP1LQ8NDC0 245 aa10.84□□□□□ -0.67
VCP-201ENST00000358901 WIPF2Q8TF74 440 aaPredicted RBP10.84□□□□□ -0.67
VCP-201ENST00000358901 SMIM2Q9BVW6 85 aa10.84□□□□□ -0.67
VCP-201ENST00000358901 C11orf68Q9H3H3 251 aaKnown RBP10.84□□□□□ -0.67
VCP-201ENST00000358901 KLK9Q9UKQ9 250 aa10.84□□□□□ -0.67
VCP-201ENST00000358901 A0A087WX48 190 aa10.84□□□□□ -0.67
VCP-201ENST00000358901 IGKV1-17P01599 117 aa10.84□□□□□ -0.67
VCP-201ENST00000358901 EGR2P11161 476 aaPredicted RBP10.84□□□□□ -0.67
VCP-201ENST00000358901 C1orf122Q6ZSJ8 110 aa10.84□□□□□ -0.67
VCP-201ENST00000358901 K7EP13 123 aa10.83□□□□□ -0.68
VCP-201ENST00000358901 GAGE1Q13065 139 aa10.83□□□□□ -0.68
VCP-201ENST00000358901 ZFAND6Q6FIF0 208 aa10.83□□□□□ -0.68
VCP-201ENST00000358901 TRPT1Q86TN4 253 aaKnown RBP10.83□□□□□ -0.68
VCP-201ENST00000358901 PRADC1Q9BSG0 188 aa10.83□□□□□ -0.68
VCP-201ENST00000358901 NAV2Q8IVL1 2488 aa10.83□□□□□ -0.68
VCP-201ENST00000358901 IGKV1OR2-108A0A075B7D4 117 aa10.83□□□□□ -0.68
VCP-201ENST00000358901 RASL10AQ92737 203 aa10.83□□□□□ -0.68
VCP-201ENST00000358901 DPH3Q96FX2 82 aa10.83□□□□□ -0.68
VCP-201ENST00000358901 F8VRH5 84 aa10.83□□□□□ -0.68
VCP-201ENST00000358901 RPL35AP18077 110 aaKnown RBP10.83□□□□□ -0.68
VCP-201ENST00000358901 TRAV12-2A0A075B6T6 113 aa10.82□□□□□ -0.68
VCP-201ENST00000358901 FRMD6-AS1P0C7T7 363 aa10.82□□□□□ -0.68
VCP-201ENST00000358901 PMVKQ15126 192 aa10.82□□□□□ -0.68
VCP-201ENST00000358901 GATD1Q8NB37 220 aa10.82□□□□□ -0.68
VCP-201ENST00000358901 TRAV8-3A0A0A6YYJ7 113 aa10.82□□□□□ -0.68
VCP-201ENST00000358901 INSP01308 110 aa10.82□□□□□ -0.68
VCP-201ENST00000358901 GRNP28799 593 aaKnown RBP10.82□□□□□ -0.68
VCP-201ENST00000358901 DYNAPQ8N1N2 210 aa10.82□□□□□ -0.68
VCP-201ENST00000358901 AGPAT4-IT1Q9H0P7 198 aa10.82□□□□□ -0.68
VCP-201ENST00000358901 MYMXA0A1B0GTQ4 84 aa10.82□□□□□ -0.68
VCP-201ENST00000358901 PLA2G5P39877 138 aa10.82□□□□□ -0.68
VCP-201ENST00000358901 LINC00173Q6ZV60 143 aa10.82□□□□□ -0.68
VCP-201ENST00000358901 PIP4P1Q86T03 277 aa10.82□□□□□ -0.68
VCP-201ENST00000358901 C11orf1Q9H5F2 150 aa10.82□□□□□ -0.68
VCP-201ENST00000358901 CRPP02741 224 aa10.81□□□□□ -0.68
VCP-201ENST00000358901 KLF5Q13887 457 aaPredicted RBP10.81□□□□□ -0.68
VCP-201ENST00000358901 PRSS33Q8NF86 280 aa10.81□□□□□ -0.68
VCP-201ENST00000358901 SHISA9B4DS77 424 aa10.81□□□□□ -0.68
VCP-201ENST00000358901 WISP2O76076 250 aa10.81□□□□□ -0.68
VCP-201ENST00000358901 Q6ZPA2 131 aa10.81□□□□□ -0.68
VCP-201ENST00000358901 C8orf31Q8N9H6 132 aa10.81□□□□□ -0.68
VCP-201ENST00000358901 FAM167A-AS1Q96KT0 104 aa10.81□□□□□ -0.68
VCP-201ENST00000358901 XCL2Q9UBD3 114 aa10.81□□□□□ -0.68
VCP-201ENST00000358901 RITA1Q96K30 269 aa10.81□□□□□ -0.68
VCP-201ENST00000358901 NDUFA4O00483 81 aa10.81□□□□□ -0.68
VCP-201ENST00000358901 SLC25A20O43772 301 aa10.81□□□□□ -0.68
VCP-201ENST00000358901 GP9P14770 177 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms