RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 G3V318 75 aa5.14□□□□□ -1.59
CSDE1-203ENST00000358528 IGKV3-20P01619 116 aa5.14□□□□□ -1.59
CSDE1-203ENST00000358528 IGHV3-11P01762 117 aa5.14□□□□□ -1.59
CSDE1-203ENST00000358528 SRD5A1P18405 259 aa5.14□□□□□ -1.59
CSDE1-203ENST00000358528 TMEM219Q86XT9 240 aa5.14□□□□□ -1.59
CSDE1-203ENST00000358528 OR5A1Q8NGJ0 315 aa5.14□□□□□ -1.59
CSDE1-203ENST00000358528 NCOR2Q9Y618 2525 aa5.14□□□□□ -1.59
CSDE1-203ENST00000358528 SHISA9B4DS77 424 aa5.14□□□□□ -1.59
CSDE1-203ENST00000358528 H3BMG7 143 aa5.14□□□□□ -1.59
CSDE1-203ENST00000358528 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.14□□□□□ -1.59
CSDE1-203ENST00000358528 DTX2Q86UW9 622 aa5.14□□□□□ -1.59
CSDE1-203ENST00000358528 MRPL16Q9NX20 251 aaKnown RBP5.14□□□□□ -1.59
CSDE1-203ENST00000358528 IGKV2D-26A0A0A0MRZ7 120 aa5.14□□□□□ -1.59
CSDE1-203ENST00000358528 ATP5LO75964 103 aa5.14□□□□□ -1.59
CSDE1-203ENST00000358528 LY6EQ16553 131 aa5.14□□□□□ -1.59
CSDE1-203ENST00000358528 FAM74A4Q5TZK3 123 aa5.14□□□□□ -1.59
CSDE1-203ENST00000358528 VMO1Q7Z5L0 202 aa5.14□□□□□ -1.59
CSDE1-203ENST00000358528 MAP1AP78559 2803 aaPredicted RBP5.13□□□□□ -1.59
CSDE1-203ENST00000358528 PPBPP02775 128 aa5.13□□□□□ -1.59
CSDE1-203ENST00000358528 TRGV3P03979 118 aa5.13□□□□□ -1.59
CSDE1-203ENST00000358528 SH2D6Q7Z4S9 175 aa5.13□□□□□ -1.59
CSDE1-203ENST00000358528 BOD1L2Q8IYS8 172 aa5.13□□□□□ -1.59
CSDE1-203ENST00000358528 NACAE9PAV3 2078 aa5.13□□□□□ -1.59
CSDE1-203ENST00000358528 Q1RN00 199 aa5.13□□□□□ -1.59
CSDE1-203ENST00000358528 C3orf36Q3SXR2 165 aa5.13□□□□□ -1.59
CSDE1-203ENST00000358528 CD300EQ496F6 205 aaPredicted RBP5.13□□□□□ -1.59
CSDE1-203ENST00000358528 NEGR1Q7Z3B1 354 aa5.13□□□□□ -1.59
CSDE1-203ENST00000358528 CFHR4Q92496 578 aa5.13□□□□□ -1.59
CSDE1-203ENST00000358528 KAAG1Q9UBP8 84 aa5.13□□□□□ -1.59
CSDE1-203ENST00000358528 RAXQ9Y2V3 346 aa5.13□□□□□ -1.59
CSDE1-203ENST00000358528 AGRNO00468 2067 aa5.13□□□□□ -1.59
CSDE1-203ENST00000358528 TRBV25-1A0A075B6N4 114 aa5.13□□□□□ -1.59
CSDE1-203ENST00000358528 TMEM238C9JI98 176 aa5.13□□□□□ -1.59
CSDE1-203ENST00000358528 DEFB1P60022 68 aa5.13□□□□□ -1.59
CSDE1-203ENST00000358528 PDE6HQ13956 83 aa5.13□□□□□ -1.59
CSDE1-203ENST00000358528 LAGE3Q14657 143 aa5.13□□□□□ -1.59
CSDE1-203ENST00000358528 C14orf178Q8N769 122 aaPredicted RBP5.13□□□□□ -1.59
CSDE1-203ENST00000358528 PRO3102Q9H379 93 aa5.13□□□□□ -1.59
CSDE1-203ENST00000358528 TSSC4Q9Y5U2 329 aaPredicted RBP5.13□□□□□ -1.59
CSDE1-203ENST00000358528 PSMB2P49721 201 aa5.13□□□□□ -1.59
CSDE1-203ENST00000358528 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.13□□□□□ -1.59
CSDE1-203ENST00000358528 ZNF562Q6V9R5 426 aa5.13□□□□□ -1.59
CSDE1-203ENST00000358528 RNASE4P34096 147 aaKnown RBP5.12□□□□□ -1.59
CSDE1-203ENST00000358528 IGFL3Q6UXB1 125 aa5.12□□□□□ -1.59
CSDE1-203ENST00000358528 C2CD3Q4AC94 2353 aa5.12□□□□□ -1.59
CSDE1-203ENST00000358528 PF4V1P10720 104 aa5.12□□□□□ -1.59
CSDE1-203ENST00000358528 WFDC2Q14508 124 aa5.12□□□□□ -1.59
CSDE1-203ENST00000358528 TMEM170BQ5T4T1 132 aa5.12□□□□□ -1.59
CSDE1-203ENST00000358528 PIP4P1Q86T03 277 aa5.12□□□□□ -1.59
CSDE1-203ENST00000358528 OR10J6PQ8NGY7 276 aa5.12□□□□□ -1.59
CSDE1-203ENST00000358528 FANCD2OSQ96PS1 177 aa5.12□□□□□ -1.59
CSDE1-203ENST00000358528 A0A096LNJ9 63 aa5.12□□□□□ -1.59
CSDE1-203ENST00000358528 SRSF1Q07955 248 aaKnown RBP eCLIP5.12□□□□□ -1.59
CSDE1-203ENST00000358528 MRGPRG-AS1Q2M3A8 158 aa5.12□□□□□ -1.59
CSDE1-203ENST00000358528 C8orf31Q8N9H6 132 aa5.12□□□□□ -1.59
CSDE1-203ENST00000358528 SIGMAR1Q99720 223 aa5.12□□□□□ -1.59
CSDE1-203ENST00000358528 NPFFR1Q9GZQ6 430 aa5.12□□□□□ -1.59
CSDE1-203ENST00000358528 CHTOPQ9Y3Y2 248 aaKnown RBP5.12□□□□□ -1.59
CSDE1-203ENST00000358528 ZNF815PA8K554 130 aa5.11□□□□□ -1.59
CSDE1-203ENST00000358528 ATP6V0E1O15342 81 aa5.11□□□□□ -1.59
CSDE1-203ENST00000358528 CRYGBP07316 175 aa5.11□□□□□ -1.59
CSDE1-203ENST00000358528 GAGE13Q4V321 117 aa5.11□□□□□ -1.59
CSDE1-203ENST00000358528 AGPAT4-IT1Q9H0P7 198 aa5.11□□□□□ -1.59
CSDE1-203ENST00000358528 IGHV3-64A0A075B6Q5 118 aa5.11□□□□□ -1.59
CSDE1-203ENST00000358528 CEACAM4O75871 244 aa5.11□□□□□ -1.59
CSDE1-203ENST00000358528 CTSGP08311 255 aa5.11□□□□□ -1.59
CSDE1-203ENST00000358528 ATP5G2Q06055 141 aa5.11□□□□□ -1.59
CSDE1-203ENST00000358528 EEF1AKMT3Q96AZ1 226 aa5.11□□□□□ -1.59
CSDE1-203ENST00000358528 RNF5Q99942 180 aa5.11□□□□□ -1.59
CSDE1-203ENST00000358528 CIDEAO60543 219 aa5.11□□□□□ -1.59
CSDE1-203ENST00000358528 AZU1P20160 251 aa5.11□□□□□ -1.59
CSDE1-203ENST00000358528 ODF1Q14990 250 aa5.11□□□□□ -1.59
CSDE1-203ENST00000358528 Q6ZQT7 251 aa5.11□□□□□ -1.59
CSDE1-203ENST00000358528 BEX4Q9NWD9 120 aaPredicted RBP5.11□□□□□ -1.59
CSDE1-203ENST00000358528 PGPEP1Q9NXJ5 209 aa5.11□□□□□ -1.59
CSDE1-203ENST00000358528 ZNF256Q9Y2P7 627 aaPredicted RBP5.11□□□□□ -1.59
CSDE1-203ENST00000358528 IGLV11-55A0A075B6I3 123 aa5.1□□□□□ -1.59
CSDE1-203ENST00000358528 WI2-2373I1.2A0A1W2PRP0 233 aa5.1□□□□□ -1.59
CSDE1-203ENST00000358528 CEND1Q8N111 149 aa5.1□□□□□ -1.59
CSDE1-203ENST00000358528 HOXA3O43365 443 aaPredicted RBP5.1□□□□□ -1.59
CSDE1-203ENST00000358528 FGF6P10767 208 aa5.1□□□□□ -1.59
CSDE1-203ENST00000358528 ZNF493Q6ZR52 646 aa5.1□□□□□ -1.59
CSDE1-203ENST00000358528 Q8N8P6 123 aa5.1□□□□□ -1.59
CSDE1-203ENST00000358528 LAMA5O15230 3695 aa5.1□□□□□ -1.59
CSDE1-203ENST00000358528 CHD8Q9HCK8 2581 aa5.1□□□□□ -1.59
CSDE1-203ENST00000358528 DMXL1Q9Y485 3027 aa5.1□□□□□ -1.59
CSDE1-203ENST00000358528 F6UB75 175 aa5.1□□□□□ -1.59
CSDE1-203ENST00000358528 G3V4G9 280 aa5.1□□□□□ -1.59
CSDE1-203ENST00000358528 PRTN3P24158 256 aa5.1□□□□□ -1.59
CSDE1-203ENST00000358528 ASIPP42127 132 aa5.1□□□□□ -1.59
CSDE1-203ENST00000358528 BRD3OSQ6XYD6 125 aa5.1□□□□□ -1.59
CSDE1-203ENST00000358528 SLC50A1Q9BRV3 221 aa5.1□□□□□ -1.59
CSDE1-203ENST00000358528 LRBAP50851 2863 aa5.09□□□□□ -1.59
CSDE1-203ENST00000358528 AKAP13Q12802 2813 aa5.09□□□□□ -1.59
CSDE1-203ENST00000358528 C12orf74Q32Q52 190 aa5.09□□□□□ -1.59
CSDE1-203ENST00000358528 C8orf86Q6ZUL3 223 aa5.09□□□□□ -1.59
CSDE1-203ENST00000358528 MAPKAPK5-AS1Q8N8E1 139 aa5.09□□□□□ -1.59
CSDE1-203ENST00000358528 DPF1Q92782 380 aa5.09□□□□□ -1.59
CSDE1-203ENST00000358528 RPL39LQ96EH5 51 aaKnown RBP5.09□□□□□ -1.59
CSDE1-203ENST00000358528 A0A087WWL8 130 aa5.09□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 2258 ms