RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 RETNQ9HD89 108 aa11.11□□□□□ -0.63
TPM1-206ENST00000358278 GOLT1BQ9Y3E0 138 aa11.11□□□□□ -0.63
TPM1-206ENST00000358278 TGP01266 2768 aa11.11□□□□□ -0.63
TPM1-206ENST00000358278 TRAV12-3A0A0B4J271 114 aa11.1□□□□□ -0.63
TPM1-206ENST00000358278 SPRY2O43597 315 aa11.1□□□□□ -0.63
TPM1-206ENST00000358278 PRR9Q5T870 116 aa11.1□□□□□ -0.63
TPM1-206ENST00000358278 RNF183Q96D59 192 aa11.1□□□□□ -0.63
TPM1-206ENST00000358278 NIPSNAP3BQ9BS92 247 aa11.1□□□□□ -0.63
TPM1-206ENST00000358278 ZFP30Q9Y2G7 519 aa11.1□□□□□ -0.63
TPM1-206ENST00000358278 DNAH9Q9NYC9 4486 aa11.1□□□□□ -0.63
TPM1-206ENST00000358278 TRBV6-1A0A0K0K1D8 114 aa11.09□□□□□ -0.63
TPM1-206ENST00000358278 LTAP01374 205 aa11.09□□□□□ -0.63
TPM1-206ENST00000358278 ZNF674Q2M3X9 581 aa11.09□□□□□ -0.63
TPM1-206ENST00000358278 SMUG1Q53HV7 270 aa11.09□□□□□ -0.63
TPM1-206ENST00000358278 TP53TG1Q9Y2A0 90 aa11.09□□□□□ -0.63
TPM1-206ENST00000358278 NDUFS6O75380 124 aaKnown RBP11.09□□□□□ -0.63
TPM1-206ENST00000358278 TAS2R60P59551 318 aa11.09□□□□□ -0.63
TPM1-206ENST00000358278 SRSF3P84103 164 aaKnown RBP11.09□□□□□ -0.63
TPM1-206ENST00000358278 BAGE2Q86Y30 109 aa11.09□□□□□ -0.63
TPM1-206ENST00000358278 TMEM256Q8N2U0 113 aa11.09□□□□□ -0.63
TPM1-206ENST00000358278 NHLRC2Q8NBF2 726 aa11.09□□□□□ -0.63
TPM1-206ENST00000358278 C20orf144Q9BQM9 153 aa11.09□□□□□ -0.63
TPM1-206ENST00000358278 OVOL2Q9BRP0 275 aa11.09□□□□□ -0.63
TPM1-206ENST00000358278 PARLQ9H300 379 aa11.09□□□□□ -0.63
TPM1-206ENST00000358278 SMDT1Q9H4I9 107 aa11.09□□□□□ -0.63
TPM1-206ENST00000358278 RAB19A4D1S5 217 aa11.08□□□□□ -0.64
TPM1-206ENST00000358278 GCGP01275 180 aa11.08□□□□□ -0.64
TPM1-206ENST00000358278 SRP19P09132 144 aaKnown RBP11.08□□□□□ -0.64
TPM1-206ENST00000358278 RBMY1A1P0DJD3 496 aaKnown RBP11.08□□□□□ -0.64
TPM1-206ENST00000358278 RBMY1CP0DJD4 496 aa11.08□□□□□ -0.64
TPM1-206ENST00000358278 GNG4P50150 75 aa11.08□□□□□ -0.64
TPM1-206ENST00000358278 RBMY1FQ15415 496 aaKnown RBP11.08□□□□□ -0.64
TPM1-206ENST00000358278 CENPWQ5EE01 88 aa11.08□□□□□ -0.64
TPM1-206ENST00000358278 C1orf158Q8N1D5 194 aa11.08□□□□□ -0.64
TPM1-206ENST00000358278 OR11H2Q8NH07 326 aa11.08□□□□□ -0.64
TPM1-206ENST00000358278 NHLRC4P0CG21 123 aaPredicted RBP11.07□□□□□ -0.64
TPM1-206ENST00000358278 LINC01587Q99440 93 aa11.07□□□□□ -0.64
TPM1-206ENST00000358278 H7BYZ3 331 aa11.06□□□□□ -0.64
TPM1-206ENST00000358278 Q6AWC8 147 aa11.06□□□□□ -0.64
TPM1-206ENST00000358278 ZNF705AQ6ZN79 300 aaPredicted RBP11.06□□□□□ -0.64
TPM1-206ENST00000358278 TMEM183AQ8IXX5 376 aa11.06□□□□□ -0.64
TPM1-206ENST00000358278 STAB2Q8WWQ8 2551 aa11.06□□□□□ -0.64
TPM1-206ENST00000358278 HUWE1Q7Z6Z7 4374 aaKnown RBP11.06□□□□□ -0.64
TPM1-206ENST00000358278 TRAV21A0A0B4J279 112 aa11.06□□□□□ -0.64
TPM1-206ENST00000358278 HTN1P15515 57 aa11.06□□□□□ -0.64
TPM1-206ENST00000358278 ZC2HC1AQ96GY0 325 aa11.06□□□□□ -0.64
TPM1-206ENST00000358278 SMIM7Q9BQ49 75 aa11.06□□□□□ -0.64
TPM1-206ENST00000358278 C9JQL5 133 aa11.05□□□□□ -0.64
TPM1-206ENST00000358278 ZNF324O75467 553 aaPredicted RBP11.05□□□□□ -0.64
TPM1-206ENST00000358278 PFN1P07737 140 aaKnown RBP11.05□□□□□ -0.64
TPM1-206ENST00000358278 ZNF80P51504 273 aaPredicted RBP11.05□□□□□ -0.64
TPM1-206ENST00000358278 Q6ZQT7 251 aa11.05□□□□□ -0.64
TPM1-206ENST00000358278 COMMD7Q86VX2 200 aa11.05□□□□□ -0.64
TPM1-206ENST00000358278 NAGKQ9UJ70 344 aa11.05□□□□□ -0.64
TPM1-206ENST00000358278 TRBV20OR9-2A0A075B6H5 130 aa11.04□□□□□ -0.64
TPM1-206ENST00000358278 ZNF727A8MUV8 499 aa11.04□□□□□ -0.64
TPM1-206ENST00000358278 C9JCJ5 164 aa11.04□□□□□ -0.64
TPM1-206ENST00000358278 MGST1P10620 155 aaKnown RBP11.04□□□□□ -0.64
TPM1-206ENST00000358278 SMIM12Q96EX1 92 aa11.04□□□□□ -0.64
TPM1-206ENST00000358278 PYGO2Q9BRQ0 406 aa11.04□□□□□ -0.64
TPM1-206ENST00000358278 PGPEP1LA6NFU8 196 aa11.04□□□□□ -0.64
TPM1-206ENST00000358278 RRN3P1Q2M238 152 aa11.04□□□□□ -0.64
TPM1-206ENST00000358278 FAM162BQ5T6X4 162 aa11.04□□□□□ -0.64
TPM1-206ENST00000358278 PRR27Q6MZM9 219 aa11.04□□□□□ -0.64
TPM1-206ENST00000358278 COX8CQ7Z4L0 72 aa11.04□□□□□ -0.64
TPM1-206ENST00000358278 MLST8Q9BVC4 326 aa11.04□□□□□ -0.64
TPM1-206ENST00000358278 X6R8D5 127 aa11.04□□□□□ -0.64
TPM1-206ENST00000358278 LINC00862A6NCI5 91 aa11.03□□□□□ -0.64
TPM1-206ENST00000358278 SMIM9A6NGZ8 99 aa11.03□□□□□ -0.64
TPM1-206ENST00000358278 ZNF705GA8MUZ8 300 aaPredicted RBP11.03□□□□□ -0.64
TPM1-206ENST00000358278 MIFP14174 115 aa11.03□□□□□ -0.64
TPM1-206ENST00000358278 MUC21Q5SSG8 566 aa11.03□□□□□ -0.64
TPM1-206ENST00000358278 FAM159AQ6UWV7 190 aa11.03□□□□□ -0.64
TPM1-206ENST00000358278 NEU1Q99519 415 aa11.03□□□□□ -0.64
TPM1-206ENST00000358278 FABP5P3A8MUU1 101 aa11.02□□□□□ -0.65
TPM1-206ENST00000358278 SOHLH1Q5JUK2 328 aa11.02□□□□□ -0.65
TPM1-206ENST00000358278 UQCC3Q6UW78 93 aa11.02□□□□□ -0.65
TPM1-206ENST00000358278 IGHV1OR15-1A0A075B7D0 117 aa11.01□□□□□ -0.65
TPM1-206ENST00000358278 CBY3A6NI87 242 aa11.01□□□□□ -0.65
TPM1-206ENST00000358278 SH2D1AO60880 128 aa11.01□□□□□ -0.65
TPM1-206ENST00000358278 IGLV2-8P01709 118 aa11.01□□□□□ -0.65
TPM1-206ENST00000358278 PRM2P04554 102 aa11.01□□□□□ -0.65
TPM1-206ENST00000358278 SFTA3P0C7M3 94 aa11.01□□□□□ -0.65
TPM1-206ENST00000358278 FAM74A3Q4VXF1 159 aa11.01□□□□□ -0.65
TPM1-206ENST00000358278 EIF4E3Q8N5X7 224 aaKnown RBP11.01□□□□□ -0.65
TPM1-206ENST00000358278 BIN3Q9NQY0 253 aa11.01□□□□□ -0.65
TPM1-206ENST00000358278 IGHV4-28A0A0C4DH34 117 aa11.01□□□□□ -0.65
TPM1-206ENST00000358278 CRIP1P50238 77 aa11.01□□□□□ -0.65
TPM1-206ENST00000358278 U3KQK5 164 aa11.01□□□□□ -0.65
TPM1-206ENST00000358278 DEFB4AO15263 64 aa11□□□□□ -0.65
TPM1-206ENST00000358278 ORM1P02763 201 aa11□□□□□ -0.65
TPM1-206ENST00000358278 ANXA2RQ3ZCQ2 193 aa11□□□□□ -0.65
TPM1-206ENST00000358278 Q8NAQ8 132 aa11□□□□□ -0.65
TPM1-206ENST00000358278 OCC1Q8TAD7 63 aa11□□□□□ -0.65
TPM1-206ENST00000358278 TMEM263Q8WUH6 116 aaKnown RBP11□□□□□ -0.65
TPM1-206ENST00000358278 KCNS1Q96KK3 526 aa11□□□□□ -0.65
TPM1-206ENST00000358278 M0R036 132 aa10.99□□□□□ -0.65
TPM1-206ENST00000358278 OR5I1Q13606 314 aa10.99□□□□□ -0.65
TPM1-206ENST00000358278 C16orf74Q96GX8 76 aa10.99□□□□□ -0.65
TPM1-206ENST00000358278 LINC00467Q9BRT7 94 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 174.5 ms