RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 PEF1Q9UBV8 284 aaKnown RBP13.62□□□□□ -0.23
GYPC-202ENST00000356887 GNLYP22749 145 aa13.62□□□□□ -0.23
GYPC-202ENST00000356887 SLC50A1Q9BRV3 221 aa13.62□□□□□ -0.23
GYPC-202ENST00000356887 LINC01548A6NM66 108 aa13.61□□□□□ -0.23
GYPC-202ENST00000356887 SAA4P35542 130 aa13.61□□□□□ -0.23
GYPC-202ENST00000356887 TCTEX1D4Q5JR98 221 aa13.61□□□□□ -0.23
GYPC-202ENST00000356887 CLEC19AQ6UXS0 136 aa13.61□□□□□ -0.23
GYPC-202ENST00000356887 IL17RELQ6ZVW7 336 aa13.61□□□□□ -0.23
GYPC-202ENST00000356887 G3V318 75 aa13.6□□□□□ -0.23
GYPC-202ENST00000356887 MAP1LC3AQ9H492 121 aa13.6□□□□□ -0.23
GYPC-202ENST00000356887 WNK2Q9Y3S1 2297 aa13.6□□□□□ -0.23
GYPC-202ENST00000356887 IGHV3-66A0A0C4DH42 116 aa13.6□□□□□ -0.23
GYPC-202ENST00000356887 GAS8-AS1O95177 125 aa13.6□□□□□ -0.23
GYPC-202ENST00000356887 TMEM97Q5BJF2 176 aa13.6□□□□□ -0.23
GYPC-202ENST00000356887 BOD1L2Q8IYS8 172 aa13.6□□□□□ -0.23
GYPC-202ENST00000356887 AGPAT4-IT1Q9H0P7 198 aa13.6□□□□□ -0.23
GYPC-202ENST00000356887 TRAV8-2A0A0B4J237 113 aa13.59□□□□□ -0.23
GYPC-202ENST00000356887 CENPVL3A0A0U1RRI6 287 aa13.59□□□□□ -0.23
GYPC-202ENST00000356887 LMO4P61968 165 aa13.59□□□□□ -0.23
GYPC-202ENST00000356887 AMMECR1LQ6DCA0 310 aa13.59□□□□□ -0.23
GYPC-202ENST00000356887 GTF2H5Q6ZYL4 71 aa13.59□□□□□ -0.23
GYPC-202ENST00000356887 EEF1AKMT3Q96AZ1 226 aa13.59□□□□□ -0.23
GYPC-202ENST00000356887 EFNA4P52798 201 aa13.59□□□□□ -0.23
GYPC-202ENST00000356887 NEGR1Q7Z3B1 354 aa13.59□□□□□ -0.23
GYPC-202ENST00000356887 SIGMAR1Q99720 223 aa13.59□□□□□ -0.23
GYPC-202ENST00000356887 ZFYVE26Q68DK2 2539 aa13.58□□□□□ -0.23
GYPC-202ENST00000356887 IGKV3D-20A0A0C4DH25 116 aa13.58□□□□□ -0.24
GYPC-202ENST00000356887 PPIFP30405 207 aaKnown RBP13.58□□□□□ -0.24
GYPC-202ENST00000356887 CRYBA4P53673 196 aa13.58□□□□□ -0.24
GYPC-202ENST00000356887 BBC3Q96PG8 261 aaPredicted RBP13.58□□□□□ -0.24
GYPC-202ENST00000356887 C11orf21Q9P2W6 132 aa13.58□□□□□ -0.24
GYPC-202ENST00000356887 EPG5Q9HCE0 2579 aa13.58□□□□□ -0.24
GYPC-202ENST00000356887 CFAP46Q8IYW2 2715 aa13.58□□□□□ -0.24
GYPC-202ENST00000356887 TRBV7-1A0A0A6YYK4 115 aa13.57□□□□□ -0.24
GYPC-202ENST00000356887 J3KRW8 73 aa13.57□□□□□ -0.24
GYPC-202ENST00000356887 SAP30O75446 220 aa13.57□□□□□ -0.24
GYPC-202ENST00000356887 TNFRSF6BO95407 300 aa13.57□□□□□ -0.24
GYPC-202ENST00000356887 SEC11AP67812 179 aa13.57□□□□□ -0.24
GYPC-202ENST00000356887 MRPL53Q96EL3 112 aaKnown RBP13.57□□□□□ -0.24
GYPC-202ENST00000356887 UBTD1Q9HAC8 227 aa13.57□□□□□ -0.24
GYPC-202ENST00000356887 U3KQE9 123 aa13.57□□□□□ -0.24
GYPC-202ENST00000356887 IGHV3OR16-13A0A075B7E8 117 aa13.57□□□□□ -0.24
GYPC-202ENST00000356887 IGHV3-74A0A0B4J1X5 117 aa13.57□□□□□ -0.24
GYPC-202ENST00000356887 SMAD7O15105 426 aaKnown RBP13.57□□□□□ -0.24
GYPC-202ENST00000356887 PRB1P04280 392 aa13.57□□□□□ -0.24
GYPC-202ENST00000356887 FCER1GP30273 86 aa13.57□□□□□ -0.24
GYPC-202ENST00000356887 SPTBN1Q01082 2364 aaKnown RBP13.56□□□□□ -0.24
GYPC-202ENST00000356887 NPFFO15130 113 aa13.56□□□□□ -0.24
GYPC-202ENST00000356887 UFSP1Q6NVU6 142 aa13.56□□□□□ -0.24
GYPC-202ENST00000356887 WFDC3Q8IUB2 231 aa13.56□□□□□ -0.24
GYPC-202ENST00000356887 METTL26Q96S19 204 aa13.56□□□□□ -0.24
GYPC-202ENST00000356887 NXT2Q9NPJ8 142 aaKnown RBP13.56□□□□□ -0.24
GYPC-202ENST00000356887 DKK2Q9UBU2 259 aa13.56□□□□□ -0.24
GYPC-202ENST00000356887 SIVA1O15304 175 aa13.55□□□□□ -0.24
GYPC-202ENST00000356887 LEPP41159 167 aa13.55□□□□□ -0.24
GYPC-202ENST00000356887 C5orf56Q8N8D9 126 aa13.55□□□□□ -0.24
GYPC-202ENST00000356887 CSMD1Q96PZ7 3565 aa13.55□□□□□ -0.24
GYPC-202ENST00000356887 MED13LQ71F56 2210 aa13.55□□□□□ -0.24
GYPC-202ENST00000356887 IGHV3-49A0A0A0MS15 119 aa13.55□□□□□ -0.24
GYPC-202ENST00000356887 ZNF207O43670 478 aaKnown RBP13.55□□□□□ -0.24
GYPC-202ENST00000356887 EVI2AP22794 236 aa13.55□□□□□ -0.24
GYPC-202ENST00000356887 C8orf86Q6ZUL3 223 aa13.55□□□□□ -0.24
GYPC-202ENST00000356887 OR9G4Q8NGQ1 327 aa13.55□□□□□ -0.24
GYPC-202ENST00000356887 HIF1ANQ9NWT6 349 aa13.55□□□□□ -0.24
GYPC-202ENST00000356887 TRAV8-6A0A0B4J262 113 aa13.54□□□□□ -0.24
GYPC-202ENST00000356887 C7orf71A4D174 169 aa13.54□□□□□ -0.24
GYPC-202ENST00000356887 GATA1P15976 413 aaPredicted RBP13.54□□□□□ -0.24
GYPC-202ENST00000356887 TMEM78Q5T7P6 136 aa13.54□□□□□ -0.24
GYPC-202ENST00000356887 C9orf47Q6ZRZ4 202 aa13.54□□□□□ -0.24
GYPC-202ENST00000356887 BPESC1Q9GZL8 116 aa13.54□□□□□ -0.24
GYPC-202ENST00000356887 TRAV26-1A0A087WT03 109 aa13.54□□□□□ -0.24
GYPC-202ENST00000356887 A1L4Q6 167 aa13.54□□□□□ -0.24
GYPC-202ENST00000356887 AZU1P20160 251 aa13.54□□□□□ -0.24
GYPC-202ENST00000356887 ATP5G2Q06055 141 aa13.54□□□□□ -0.24
GYPC-202ENST00000356887 PIFOQ8TCI5 191 aa13.54□□□□□ -0.24
GYPC-202ENST00000356887 C18orf15Q96N68 181 aa13.54□□□□□ -0.24
GYPC-202ENST00000356887 ZMAT4Q9H898 229 aa13.54□□□□□ -0.24
GYPC-202ENST00000356887 TCTAP57738 103 aa13.53□□□□□ -0.24
GYPC-202ENST00000356887 CKS1BP61024 79 aa13.53□□□□□ -0.24
GYPC-202ENST00000356887 Q8N8P6 123 aa13.53□□□□□ -0.24
GYPC-202ENST00000356887 PGPEP1Q9NXJ5 209 aa13.53□□□□□ -0.24
GYPC-202ENST00000356887 IGLV2-18A0A075B6J9 118 aa13.52□□□□□ -0.24
GYPC-202ENST00000356887 IGHV7-4-1A0A0J9YVY3 117 aa13.52□□□□□ -0.24
GYPC-202ENST00000356887 GAGE10A6NGK3 116 aa13.52□□□□□ -0.24
GYPC-202ENST00000356887 ADAMTSL5Q6ZMM2 481 aa13.52□□□□□ -0.24
GYPC-202ENST00000356887 TRGV3P03979 118 aa13.52□□□□□ -0.25
GYPC-202ENST00000356887 HSD52Q0P140 79 aa13.52□□□□□ -0.25
GYPC-202ENST00000356887 C19orf54Q5BKX5 351 aa13.52□□□□□ -0.25
GYPC-202ENST00000356887 PCP2Q8IVA1 136 aa13.52□□□□□ -0.25
GYPC-202ENST00000356887 OR4X2Q8NGF9 303 aa13.52□□□□□ -0.25
GYPC-202ENST00000356887 ITLN2Q8WWU7 325 aaPredicted RBP13.52□□□□□ -0.25
GYPC-202ENST00000356887 ODF1Q14990 250 aa13.51□□□□□ -0.25
GYPC-202ENST00000356887 OR2K2Q8NGT1 345 aa13.51□□□□□ -0.25
GYPC-202ENST00000356887 H3BRM9 83 aa13.51□□□□□ -0.25
GYPC-202ENST00000356887 IGHV4-4A0A075B6R2 117 aa13.5□□□□□ -0.25
GYPC-202ENST00000356887 TRAV41A0A0B4J266 112 aa13.5□□□□□ -0.25
GYPC-202ENST00000356887 A6NDN8 102 aa13.5□□□□□ -0.25
GYPC-202ENST00000356887 OR11H12B2RN74 326 aa13.5□□□□□ -0.25
GYPC-202ENST00000356887 NMUP48645 174 aa13.5□□□□□ -0.25
GYPC-202ENST00000356887 PSMG4Q5JS54 123 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms